Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc8.7 Carica papaya HOM05D005992 ORTHO05D007476 8.9e-93 343.6 172 100.0
Manes.13G058400 Manihot esculenta HOM05D005992 ORTHO05D007476 4.6e-57 224.9 176 69.9
Thecc.01G203400 Theobroma cacao HOM05D005992 ORTHO05D007476 1.1e-55 220.3 175 67.4
Gohir.D11G152400 Gossypium hirsutum HOM05D005992 ORTHO05D007476 3.6e-54 215.3 176 67.0
Gorai.007G163000 Gossypium raimondii HOM05D005992 ORTHO05D007476 8.1e-54 214.2 176 67.0
Gohir.A11G146200 Gossypium hirsutum HOM05D005992 ORTHO05D007476 1.1e-53 213.8 176 67.0
COL.COLO4_19718 Corchorus olitorius HOM05D005992 ORTHO05D007476 3.8e-51 205.3 175 66.3
CiPaw.13G059000 Carya illinoinensis HOM05D005992 ORTHO05D007476 1.9e-50 203.0 175 63.4
Manes.12G055803 Manihot esculenta HOM05D005992 ORTHO05D007476 3.2e-50 202.2 176 64.8
Duzib138G0279 Durio zibethinus HOM05D005992 ORTHO05D007476 1.2e-49 200.3 173 64.7
Potri.014G172600 Populus trichocarpa HOM05D005992 ORTHO05D007476 3.5e-49 198.7 184 62.5
Duzib133G0028 Durio zibethinus HOM05D005992 ORTHO05D007476 4.6e-49 198.4 174 62.6
TWI36G0694 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 7.4e-47 191.0 170 57.1
CSS0023701 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 1.3e-46 190.3 176 59.7
CSS0036227 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 1.3e-46 190.3 176 59.7
GSVIVG01004128001 Vitis vinifera HOM05D005992 ORTHO05D007476 2.1e-46 189.5 172 59.9
TWI36G1335 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 2.8e-46 189.1 170 56.5
Prupe.8G267200 Prunus persica HOM05D005992 ORTHO05D007476 8.1e-46 187.6 174 61.5
RcHm_v2.0_Chr7g0176831 Rosa chinensis HOM05D005992 ORTHO05D007476 1.4e-45 186.8 171 59.6
Dinv28773 Davidia involucrata HOM05D005992 ORTHO05D007476 1.8e-45 186.4 175 57.1
FvH4_5g18680 Fragaria vesca HOM05D005992 ORTHO05D007476 2.4e-45 186.0 175 58.3
CANSAT11G0965 Cannabis sativa HOM05D005992 ORTHO05D007476 3.1e-45 185.7 179 59.8
FAN18G0660 Fragaria x ananassa HOM05D005992 ORTHO05D007476 5.3e-45 184.9 175 58.3
Hma1.2p1_0834F.1_g225730 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 6.9e-45 184.5 169 57.4
FAN04G1498 Fragaria x ananassa HOM05D005992 ORTHO05D007476 2.0e-44 183.0 175 57.7
FAN08G0048 Fragaria x ananassa HOM05D005992 ORTHO05D007476 2.6e-44 182.6 175 57.7
FAN13G0560 Fragaria x ananassa HOM05D005992 ORTHO05D007476 2.6e-44 182.6 175 58.9
TWI75G1816 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 4.5e-44 181.8 170 55.9
Ciclev10016954m.g Citrus clementina HOM05D005992 ORTHO05D007476 2.9e-43 179.1 175 61.1
Nn7g37421 Nelumbo nucifera HOM05D005992 ORTHO05D007476 2.9e-43 179.1 172 55.8
MD03G1298800 Malus domestica HOM05D005992 ORTHO05D007476 4.9e-43 178.3 178 59.6
Hma1.2p1_0161F.1_g071860 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 6.4e-43 177.9 171 55.6
HanXRQChr08g0230801 Helianthus annuus HOM05D005992 ORTHO05D007476 1.9e-42 176.4 169 58.6
AUR62017763 Chenopodium quinoa HOM05D005992 ORTHO05D007476 4.2e-42 175.3 174 54.6
PGR044G1143 Punica granatum HOM05D005992 ORTHO05D007476 4.6e-41 171.8 150 58.7
QL09p044779 Quercus lobata HOM05D005992 ORTHO05D007476 1.0e-40 170.6 179 54.7
Atru.chr6.3466 Acer truncatum HOM05D005992 ORTHO05D007476 1.8e-40 169.9 177 55.9
Psat5g001840 Pisum sativum HOM05D005992 ORTHO05D007476 1.9e-39 166.4 169 57.4
Lsat_1_v5_gn_9_15721 Lactuca sativa HOM05D005992 ORTHO05D007476 3.3e-39 165.6 173 54.9
Sc10g0006540 Simmondsia chinensis HOM05D005992 ORTHO05D007476 2.1e-38 162.9 161 54.0
Cc01_g15730 Coffea canephora HOM05D005992 ORTHO05D007476 3.7e-38 162.2 174 55.7
Oeu058218.1 Olea europaea HOM05D005992 ORTHO05D007476 4.8e-38 161.8 171 52.6
Lj1g0017920 Lotus japonicus HOM05D005992 ORTHO05D007476 1.8e-37 159.8 169 56.8
arahy.Tifrunner.gnm1.ann1.DJH8FA Arachis hypogaea HOM05D005992 ORTHO05D007476 3.1e-37 159.1 169 55.0
Ah.04g163410 Amaranthus hybridus HOM05D005992 ORTHO05D007476 9.0e-37 157.5 171 52.6
ECA247G1400 Erigeron canadensis HOM05D005992 ORTHO05D007476 2.6e-36 156.0 155 56.1
HPP92_004514 Vanilla planifolia HOM05D005992 ORTHO05D007476 1.0e-35 154.1 170 49.4
Lj1C108T9 Lonicera japonica HOM05D005992 ORTHO05D007476 2.2e-35 152.9 118 63.6
Ca_15291_v3 Cicer arietinum L. HOM05D005992 ORTHO05D007476 2.9e-35 152.5 194 51.0
Sabra14G0132200 Salix brachista HOM05D005992 ORTHO05D007476 6.5e-35 151.4 225 46.7
Medtr3g118100 Medicago truncatula HOM05D005992 ORTHO05D007476 8.4e-35 151.0 172 52.9
THA.LOC104822452 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 1.4e-34 150.2 164 50.6
Glyma.06G002700 Glycine max HOM05D005992 ORTHO05D007476 2.5e-34 149.4 170 54.1
arahy.Tifrunner.gnm1.ann1.B4TR6Y Arachis hypogaea HOM05D005992 ORTHO05D007476 7.1e-34 147.9 162 53.7
Migut.D00757 Erythranthe guttata HOM05D005992 ORTHO05D007476 9.3e-34 147.5 172 49.4
VMungo1309G0397 Vigna mungo HOM05D005992 ORTHO05D007476 9.3e-34 147.5 171 54.4
MBI07_g44661_MAGBIO Magnolia biondii HOM05D005992 ORTHO05D007476 1.2e-33 147.1 147 54.4
Nitab4.5_0001348g0200 Nicotiana tabacum HOM05D005992 ORTHO05D007476 2.7e-33 146.0 165 54.5
Phvul.009G118300 Phaseolus vulgaris HOM05D005992 ORTHO05D007476 2.7e-33 146.0 170 51.8
Solyc06g082830.3 Solanum lycopersicum HOM05D005992 ORTHO05D007476 6.0e-33 144.8 164 52.4
vmacro14669 Vaccinium macrocarpon HOM05D005992 ORTHO05D007476 6.0e-33 144.8 216 42.6
Eucgr.K02345 Eucalyptus grandis HOM05D005992 ORTHO05D007476 1.3e-32 143.7 164 53.0
Glyma.04G002700 Glycine max HOM05D005992 ORTHO05D007476 1.3e-32 143.7 171 52.0
EL10Ac9g23025 Beta vulgaris HOM05D005992 ORTHO05D007476 3.0e-32 142.5 148 52.0
Nitab4.5_0008751g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 3.0e-32 142.5 165 53.3
PGSC0003DMG400027679 Solanum tuberosum HOM05D005992 ORTHO05D007476 3.0e-32 142.5 165 52.7
Nitab4.5_0009028g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 3.9e-32 142.1 172 54.1
Sopen06g034190 Solanum pennellii HOM05D005992 ORTHO05D007476 8.7e-32 141.0 165 52.1
Peaxi162Scf00390g00125 Petunia axillaris HOM05D005992 ORTHO05D007476 1.5e-31 140.2 162 53.1
Rhsim01G0246100 Rhododendron simsii HOM05D005992 ORTHO05D007476 1.9e-31 139.8 135 53.3
AUR62032915 Chenopodium quinoa HOM05D005992 ORTHO05D007476 2.5e-31 139.4 142 51.4
SalBow6G0883 Salvia bowleyana HOM05D005992 ORTHO05D007476 3.3e-31 139.0 187 48.1
SGA_v2.0_scaffold8G04484 Striga asiatica HOM05D005992 ORTHO05D007476 3.3e-31 139.0 164 51.2
CAN.G874.50 Capsicum annuum HOM05D005992 ORTHO05D007476 5.7e-31 138.3 167 52.1
CiPaw.14G047400 Carya illinoinensis HOM05D005992 ORTHO05D007476 1.3e-30 137.1 127 59.1
CDE07G1966 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 1.3e-30 137.1 155 48.4
TWI18G0378 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 1.3e-30 137.1 136 53.7
DCAR_018600 Daucus carota HOM05D005992 ORTHO05D007476 1.6e-30 136.7 200 43.0
Lalb_Chr11g0061201 Lupinus albus HOM05D005992 ORTHO05D007476 1.6e-30 136.7 178 48.9
PSO357G0365 Papaver somniferum HOM05D005992 ORTHO05D007476 2.8e-30 136.0 168 49.4
Os02g0609400 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 4.8e-30 135.2 151 48.3
THA.LOC104819021 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 4.8e-30 135.2 164 48.8
Nitab4.5_0005967g0050 Nicotiana tabacum HOM05D005992 ORTHO05D007476 6.3e-30 134.8 178 51.1
PSO170G4201 Papaver somniferum HOM05D005992 ORTHO05D007476 4.1e-29 132.1 168 48.8
Zm00001eb246760 Zea mays HOM05D005992 ORTHO05D007476 9.0e-29 131.0 140 49.3
CDE04G1688 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 1.2e-28 130.6 158 44.3
unitig_60.g25570 Utricularia gibba HOM05D005992 ORTHO05D007476 1.5e-28 130.2 160 50.0
MSTRG.18519 Avicennia marina HOM05D005992 ORTHO05D007476 1.3e-27 127.1 155 49.7
SalBow2G0316 Salvia bowleyana HOM05D005992 ORTHO05D007476 1.3e-27 127.1 217 41.0
TPR.G38510 Trifolium pratense HOM05D005992 ORTHO05D007476 8.5e-27 124.4 134 56.0
ATR0743G072 Amborella trichopoda HOM05D005992 ORTHO05D007476 4.6e-25 118.6 149 43.6
Aqoxy2G04184 Aquilegia oxysepala HOM05D001906 ORTHO05D002083 3.9e-24 115.5 134 48.5
TAR362G0776 Trochodendron aralioides HOM05D005992 ORTHO05D007476 3.3e-23 112.5 100 57.0
Thhalv10021713m.g Eutrema salsugineum HOM05D005992 ORTHO05D007476 2.8e-22 109.4 160 41.9
Sp3g06520 Schrenkiella parvula HOM05D005992 ORTHO05D007476 3.7e-22 109.0 162 40.1
AL8G21060 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 1.1e-21 107.5 132 45.5
Os02g0599500 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 1.8e-21 106.7 122 45.1
Oeu064700.1 Olea europaea HOM05D005992 ORTHO05D007476 4.1e-21 105.5 109 48.6
AT5G48335 Arabidopsis thaliana HOM05D005992 ORTHO05D007476 1.2e-20 104.0 132 45.5
CARHR183920 Cardamine hirsuta HOM05D005992 ORTHO05D007476 1.2e-20 104.0 169 39.1
BraA05t22792Z Brassica rapa HOM05D005992 ORTHO05D007476 4.2e-18 95.5 161 37.9
Hma1.2p1_1756F.1_g301045 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 7.2e-18 94.7 104 51.9
A05p40610 Brassica napus HOM05D005992 ORTHO05D007476 6.1e-17 91.7 161 35.4
Carub.0008s0791 Capsella rubella HOM05D005992 ORTHO05D007476 6.1e-17 91.7 127 44.9
C05p59720 Brassica napus HOM05D005992 ORTHO05D007476 2.3e-16 89.7 161 36.6
BolC5t34626H Brassica oleracea HOM05D005992 ORTHO05D007476 2.3e-16 89.7 161 36.6
AL3G18940 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 1.5e-15 87.0 154 35.1
Actinidia23817 Actinidia chinensis HOM05D005992 ORTHO05D007476 5.7e-15 85.1 81 55.6
CARHR082280 Cardamine hirsuta HOM05D005992 ORTHO05D007476 6.3e-14 81.6 162 35.2
Carub.0003s0715 Capsella rubella HOM05D005992 ORTHO05D007476 8.2e-14 81.3 163 35.0
Gohir.D11G007175 Gossypium hirsutum HOM05D005992 ORTHO05D007476 4.5e-12 75.5 57 63.2
Gorai.009G395900 Gossypium raimondii HOM05D005992 ORTHO05D007476 7.7e-12 74.7 57 61.4
Gohir.D11G304103 Gossypium hirsutum HOM05D005992 ORTHO05D007476 1.3e-11 73.9 57 61.4
Gohir.D07G124900 Gossypium hirsutum HOM05D005992 ORTHO05D007476 2.9e-11 72.8 57 61.4
Gohir.D09G141833 Gossypium hirsutum HOM05D005992 ORTHO05D007476 3.8e-11 72.4 57 59.6
Sopen09g012660 Solanum pennellii HOM05D005992 ORTHO05D007476 5.0e-11 72.0 73 50.7
AT3G07580 Arabidopsis thaliana HOM05D005992 ORTHO05D007476 1.1e-10 70.9 134 33.6
BcaC05g29553 Brassica carinata HOM05D005992 ORTHO05D007476 7.2e-10 68.2 115 37.4
Aa31LG5G18140 Aethionema arabicum HOM05D005992 ORTHO05D007476 1.2e-09 67.4 82 46.3
Aqoxy4G02934 Aquilegia oxysepala HOM05D001961 ORTHO05D002286 4.7e-09 65.5 118 36.4
CiPaw.10G142500 Carya illinoinensis HOM05D005992 ORTHO05D007476 1.8e-08 63.5 63 61.9
PGSC0003DMG400020300 Solanum tuberosum HOM05D005992 ORTHO05D007476 1.8e-08 63.5 82 51.2
Thhalv10005690m.g Eutrema salsugineum HOM05D005992 ORTHO05D007476 4.8e-06 55.5 87 39.1
CDE06G0073 Ceratophyllum demersum HOM05D001961 ORTHO05D002286 6.3e-06 55.1 74 41.9


User provided reference genes

Program Settings