Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc8.62 Carica papaya HOM05D001724 ORTHO05D002973 3.9e-105 384.8 191 100.0
Cfa010627 Carpinus fangiana HOM05D001724 ORTHO05D002973 1.1e-48 197.2 157 60.5
QL09p046994 Quercus lobata HOM05D001724 ORTHO05D002973 1.9e-48 196.4 157 61.1
Haze_03569 Corylus avellana HOM05D001724 ORTHO05D002973 1.3e-47 193.7 168 57.1
Manes.13G055100 Manihot esculenta HOM05D001724 ORTHO05D002973 2.0e-45 186.4 165 58.2
COL.COLO4_36365 Corchorus olitorius HOM05D001724 ORTHO05D002973 3.4e-45 185.7 160 56.2
Gohir.D11G149300 Gossypium hirsutum HOM05D001724 ORTHO05D002973 5.9e-45 184.9 161 57.8
Gorai.007G160100 Gossypium raimondii HOM05D001724 ORTHO05D002973 5.9e-45 184.9 168 56.5
Thecc.01G210100 Theobroma cacao HOM05D001724 ORTHO05D002973 7.6e-45 184.5 160 57.5
Duzib211G0603 Durio zibethinus HOM05D001724 ORTHO05D002973 1.3e-44 183.7 160 57.5
MD10G1150600 Malus domestica HOM05D001724 ORTHO05D002973 8.5e-44 181.0 184 50.5
CiPaw.13G058600 Carya illinoinensis HOM05D001724 ORTHO05D002973 3.2e-43 179.1 156 55.1
Ciclev10014999m.g Citrus clementina HOM05D001724 ORTHO05D002973 3.2e-43 179.1 160 55.6
Lalb_Chr19g0126201 Lupinus albus HOM05D001724 ORTHO05D002973 3.2e-43 179.1 158 53.8
Prupe.8G189300 Prunus persica HOM05D001724 ORTHO05D002973 5.5e-43 178.3 156 56.4
Glyma.08G343300 Glycine max HOM05D001724 ORTHO05D002973 7.2e-43 177.9 158 54.4
Phvul.008G135000 Phaseolus vulgaris HOM05D001724 ORTHO05D002973 7.2e-43 177.9 158 55.1
Potri.014G177400 Populus trichocarpa HOM05D001724 ORTHO05D002973 1.2e-42 177.2 161 55.3
TWI18G1201 Tripterygium wilfordii HOM05D001724 ORTHO05D002973 1.6e-42 176.8 153 59.5
Lj1g0019212 Lotus japonicus HOM05D001724 ORTHO05D002973 2.7e-42 176.0 157 54.8
Sabra14G0135700 Salix brachista HOM05D001724 ORTHO05D002973 2.7e-42 176.0 161 55.9
CANSAT01G3027 Cannabis sativa HOM05D001724 ORTHO05D002973 1.8e-41 173.3 159 54.7
Potri.014G018500 Populus trichocarpa HOM05D001724 ORTHO05D002973 3.9e-41 172.2 165 54.5
MD05G1157900 Malus domestica HOM05D001724 ORTHO05D002973 1.1e-40 170.6 184 48.4
Hma1.2p1_0161F.1_g071460 Hydrangea macrophylla HOM05D001724 ORTHO05D002973 2.5e-40 169.5 161 55.9
Hma1.2p1_0161F.1_g071470 Hydrangea macrophylla HOM05D001724 ORTHO05D002973 2.5e-40 169.5 161 55.9
arahy.Tifrunner.gnm1.ann1.WJPF93 Arachis hypogaea HOM05D001724 ORTHO05D002973 3.3e-40 169.1 159 51.6
RcHm_v2.0_Chr6g0282651 Rosa chinensis HOM05D001724 ORTHO05D002973 3.3e-40 169.1 169 50.9
Dinv10447 Davidia involucrata HOM05D001724 ORTHO05D002973 5.7e-40 168.3 167 52.1
TAR633G0525 Trochodendron aralioides HOM05D001724 ORTHO05D002973 7.4e-40 167.9 158 53.8
ClCG09G007930 Citrullus lanatus HOM05D001724 ORTHO05D002973 9.7e-40 167.5 169 50.3
FvH4_2g17670 Fragaria vesca HOM05D001724 ORTHO05D002973 2.2e-39 166.4 156 53.2
FAN24G3199 Fragaria x ananassa HOM05D001724 ORTHO05D002973 2.2e-39 166.4 156 53.2
arahy.Tifrunner.gnm1.ann1.ZLWG22 Arachis hypogaea HOM05D001724 ORTHO05D002973 2.8e-39 166.0 183 43.7
Ca_07444_v3 Cicer arietinum L. HOM05D001724 ORTHO05D002973 1.4e-38 163.7 165 49.1
Actinidia27654 Actinidia chinensis HOM05D001724 ORTHO05D002973 6.9e-38 161.4 160 53.8
Actinidia30008 Actinidia chinensis HOM05D001724 ORTHO05D002973 6.9e-38 161.4 160 53.8
Nn1g09819 Nelumbo nucifera HOM05D001724 ORTHO05D002973 9.1e-38 161.0 182 48.4
CSS0039154 Camellia sinensis var. sinensis HOM05D001724 ORTHO05D002973 1.2e-37 160.6 164 49.4
Eucgr.H00715 Eucalyptus grandis HOM05D001724 ORTHO05D002973 1.5e-37 160.2 156 50.0
Sed0003315 Sechium edule HOM05D001724 ORTHO05D002973 1.5e-37 160.2 166 48.2
TPR.G26836 Trifolium pratense HOM05D001724 ORTHO05D002973 2.0e-37 159.8 165 46.7
Nitab4.5_0002518g0030 Nicotiana tabacum HOM05D001724 ORTHO05D002973 3.4e-37 159.1 165 53.3
Psat3g151640 Pisum sativum HOM05D001724 ORTHO05D002973 7.7e-37 157.9 157 49.7
Rhsim13G0053300 Rhododendron simsii HOM05D001724 ORTHO05D002973 5.0e-36 155.2 164 50.0
Nitab4.5_0000038g0310 Nicotiana tabacum HOM05D001724 ORTHO05D002973 6.5e-36 154.8 165 51.5
CsaV3_7G027140 Cucumis sativus L. HOM05D001724 ORTHO05D002973 8.5e-36 154.5 169 49.1
Atru.chr6.3538 Acer truncatum HOM05D001724 ORTHO05D002973 1.9e-35 153.3 116 58.6
Peaxi162Scf00672g00211 Petunia axillaris HOM05D001724 ORTHO05D002973 4.2e-35 152.1 162 53.7
Cc08_g03940 Coffea canephora HOM05D001724 ORTHO05D002973 7.2e-35 151.4 158 50.0
MELO3C015714.2 Cucumis melo HOM05D001724 ORTHO05D002973 2.1e-34 149.8 169 48.5
vmacro02823 Vaccinium macrocarpon HOM05D001724 ORTHO05D002973 1.4e-33 147.1 179 46.9
PGR083G2426 Punica granatum HOM05D001724 ORTHO05D002973 1.8e-33 146.7 161 50.3
Lj2C1115T12 Lonicera japonica HOM05D001724 ORTHO05D002973 3.0e-33 146.0 153 50.3
CAN.G120.9 Capsicum annuum HOM05D001724 ORTHO05D002973 6.7e-33 144.8 162 49.4
Aa31sc53G70 Aethionema arabicum HOM05D001724 ORTHO05D002973 8.8e-33 144.4 154 48.7
Oeu057820.1 Olea europaea HOM05D001724 ORTHO05D002973 8.8e-33 144.4 161 46.6
HanXRQChr10g0299661 Helianthus annuus HOM05D001724 ORTHO05D002973 2.6e-32 142.9 160 48.1
Sp3g22970 Schrenkiella parvula HOM05D001724 ORTHO05D002973 4.4e-32 142.1 151 48.3
Lsat_1_v5_gn_8_97601 Lactuca sativa HOM05D001724 ORTHO05D002973 2.2e-31 139.8 159 49.1
Sopen09g021770 Solanum pennellii HOM05D001724 ORTHO05D002973 2.8e-31 139.4 161 49.7
ECA236G3973 Erigeron canadensis HOM05D001724 ORTHO05D002973 3.7e-31 139.0 159 45.3
MSTRG.12750 Avicennia marina HOM05D001724 ORTHO05D002973 8.2e-31 137.9 187 43.9
THA.LOC104808814 Tarenaya hassleriana HOM05D001724 ORTHO05D002973 8.2e-31 137.9 154 47.4
C07p10590 Brassica napus HOM05D001724 ORTHO05D002973 1.8e-30 136.7 159 46.5
AT3G25430 Arabidopsis thaliana HOM05D001724 ORTHO05D002973 2.4e-30 136.3 149 47.0
Carub.0003s2575 Capsella rubella HOM05D001724 ORTHO05D002973 2.4e-30 136.3 149 51.0
BcaB06g26745 Brassica carinata HOM05D001724 ORTHO05D002973 4.1e-30 135.6 155 47.1
BcaC06g35812 Brassica carinata HOM05D001724 ORTHO05D002973 4.1e-30 135.6 159 45.9
BolC7t41524H Brassica oleracea HOM05D001724 ORTHO05D002973 4.1e-30 135.6 159 45.9
AUR62028657 Chenopodium quinoa HOM05D001724 ORTHO05D002973 5.3e-30 135.2 156 46.2
PGSC0003DMG400028884 Solanum tuberosum HOM05D001724 ORTHO05D002973 6.9e-30 134.8 164 49.4
A07p06960 Brassica napus HOM05D001724 ORTHO05D002973 9.1e-30 134.4 151 47.0
BraA07t28486Z Brassica rapa HOM05D001724 ORTHO05D002973 9.1e-30 134.4 151 47.0
Thhalv10002449m.g Eutrema salsugineum HOM05D001724 ORTHO05D002973 3.4e-29 132.5 153 47.7
CARHR101730 Cardamine hirsuta HOM05D001724 ORTHO05D002973 4.5e-29 132.1 149 47.7
EL10Ac5g10599 Beta vulgaris HOM05D001724 ORTHO05D002973 7.7e-29 131.3 156 46.2
AUR62008078 Chenopodium quinoa HOM05D001724 ORTHO05D002973 2.9e-28 129.4 156 44.2
Hund02801 Selenicereus undatus HOM05D001724 ORTHO05D002973 1.4e-27 127.1 157 45.2
Aqoxy2G04088 Aquilegia oxysepala HOM05D001724 ORTHO05D002973 2.5e-27 126.3 157 45.2
SGA_v2.0_scaffold77G25302 Striga asiatica HOM05D001724 ORTHO05D002973 3.6e-26 122.5 175 38.3
DCAR_018616 Daucus carota HOM05D001724 ORTHO05D002973 2.3e-25 119.8 154 40.9
Ah.11g050840 Amaranthus hybridus HOM05D001724 ORTHO05D002973 3.0e-25 119.4 156 40.4
MBI07_g08152_MAGBIO Magnolia biondii HOM05D001724 ORTHO05D002973 9.7e-24 114.4 149 45.6
CDE05G0201 Ceratophyllum demersum HOM05D001724 ORTHO05D002973 7.7e-21 104.8 165 35.8
ATR0215G030 Amborella trichopoda HOM05D001724 ORTHO05D002973 6.5e-20 101.7 152 37.5
Migut.N00669 Erythranthe guttata HOM05D001724 ORTHO05D002973 4.2e-19 99.0 153 36.6
HPP92_017448 Vanilla planifolia HOM05D001724 ORTHO05D002973 2.1e-18 96.7 152 42.1
MD05G1157500 Malus domestica HOM05D001724 ORTHO05D002973 4.0e-17 92.4 154 37.7
Sc05g0001690 Simmondsia chinensis HOM05D001724 ORTHO05D002973 4.0e-17 92.4 135 41.5
Zm00001eb179840 Zea mays HOM05D001724 ORTHO05D002973 1.3e-15 87.4 161 37.3
Nn3g19400 Nelumbo nucifera HOM05D001724 ORTHO05D002973 4.8e-15 85.5 61 60.7
Gohir.A11G143000 Gossypium hirsutum HOM05D001724 ORTHO05D002973 4.1e-14 82.4 98 44.9
unitig_0.g1222 Utricularia gibba HOM05D001724 ORTHO05D002973 2.2e-12 76.6 119 39.5
SEGI_08979 Sequoiadendron giganteum HOM05D001724 ORTHO05D002973 1.2e-10 70.9 158 30.4
AL3G41300 Arabidopsis lyrata HOM05D001724 ORTHO05D002973 6.3e-07 58.5 79 39.2


User provided reference genes

Program Settings