Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc8.301 Carica papaya HOM05D005440 ORTHO05D007314 1.1e-237 826.2 412 100.0
Duzib138G1709 Durio zibethinus HOM05D005440 ORTHO05D007314 3.3e-170 602.1 408 74.3
Gorai.001G092600 Gossypium raimondii HOM05D005440 ORTHO05D007314 8.4e-166 587.4 405 73.6
Gohir.D07G086600 Gossypium hirsutum HOM05D005440 ORTHO05D007314 2.5e-165 585.9 405 73.3
Gohir.A07G081000 Gossypium hirsutum HOM05D005440 ORTHO05D007314 4.2e-165 585.1 405 73.3
Ciclev10011552m.g Citrus clementina HOM05D005440 ORTHO05D007314 4.3e-162 575.1 402 72.1
Prupe.3G188100 Prunus persica HOM05D005440 ORTHO05D007314 7.4e-162 574.3 403 71.7
CiPaw.04G136100 Carya illinoinensis HOM05D005440 ORTHO05D007314 1.3e-161 573.5 410 70.7
Potri.016G021900 Populus trichocarpa HOM05D005440 ORTHO05D007314 3.4e-159 565.5 404 71.0
Potri.016G021400 Populus trichocarpa HOM05D005440 ORTHO05D007314 1.0e-158 563.9 404 70.8
MD17G1127100 Malus domestica HOM05D005440 ORTHO05D007314 3.2e-157 558.9 393 69.7
Atru.chr5.954 Acer truncatum HOM05D005440 ORTHO05D007314 2.1e-156 556.2 402 68.9
Potri.006G023400 Populus trichocarpa HOM05D005440 ORTHO05D007314 1.0e-155 553.9 404 70.8
Cfa023527 Carpinus fangiana HOM05D005440 ORTHO05D007314 2.3e-155 552.7 410 68.8
Manes.09G077000 Manihot esculenta HOM05D005440 ORTHO05D007314 6.7e-155 551.2 401 69.6
Duzib133G0846 Durio zibethinus HOM05D005440 ORTHO05D007314 1.1e-154 550.4 408 70.1
GSVIVG01026115001 Vitis vinifera HOM05D005440 ORTHO05D007314 2.0e-154 549.7 419 68.5
TAR627G1033 Trochodendron aralioides HOM05D005440 ORTHO05D007314 7.4e-154 547.7 410 69.5
CsaV3_4G032220 Cucumis sativus L. HOM05D005440 ORTHO05D007314 9.7e-154 547.4 411 67.6
THA.LOC104826162 Tarenaya hassleriana HOM05D005440 ORTHO05D007314 9.7e-154 547.4 407 68.1
MELO3C026396.2 Cucumis melo HOM05D005440 ORTHO05D007314 1.3e-153 547.0 408 67.6
MD09G1136900 Malus domestica HOM05D005440 ORTHO05D007314 1.7e-153 546.6 400 69.2
Hma1.2p1_1803F.1_g302990 Hydrangea macrophylla HOM05D005440 ORTHO05D007314 8.2e-153 544.3 420 67.6
Thecc.01G171200 Theobroma cacao HOM05D005440 ORTHO05D007314 2.4e-152 542.7 376 72.9
Nn5g27478 Nelumbo nucifera HOM05D005440 ORTHO05D007314 9.1e-152 540.8 418 66.5
Phvul.006G001800 Phaseolus vulgaris HOM05D005440 ORTHO05D007314 2.0e-151 539.7 411 67.2
TPR.G33572 Trifolium pratense HOM05D005440 ORTHO05D007314 2.6e-151 539.3 402 68.9
THA.LOC104800970 Tarenaya hassleriana HOM05D005440 ORTHO05D007314 5.9e-151 538.1 408 68.6
CANSAT64G0070 Cannabis sativa HOM05D005440 ORTHO05D007314 6.5e-150 534.6 403 68.5
PGR004G2684 Punica granatum HOM05D005440 ORTHO05D007314 8.5e-150 534.3 394 67.8
TWI60G0164 Tripterygium wilfordii HOM05D005440 ORTHO05D007314 1.9e-149 533.1 400 67.5
Lalb_Chr22g0360841 Lupinus albus HOM05D005440 ORTHO05D007314 5.5e-149 531.6 401 67.1
RcHm_v2.0_Chr2g0153881 Rosa chinensis HOM05D005440 ORTHO05D007314 2.1e-148 529.6 401 68.8
Glyma.20G065600 Glycine max HOM05D005440 ORTHO05D007314 2.7e-148 529.3 403 67.5
Sed0022130 Sechium edule HOM05D005440 ORTHO05D007314 4.7e-148 528.5 419 65.6
Lj6g0026846 Lotus japonicus HOM05D005440 ORTHO05D007314 1.4e-147 526.9 406 68.5
arahy.Tifrunner.gnm1.ann1.TU4NXX Arachis hypogaea HOM05D005440 ORTHO05D007314 6.7e-147 524.6 403 66.3
Lalb_Chr24g0402811 Lupinus albus HOM05D005440 ORTHO05D007314 6.7e-147 524.6 400 66.2
Glyma.13G003900 Glycine max HOM05D005440 ORTHO05D007314 8.8e-147 524.2 404 67.3
Medtr3g081180 Medicago truncatula HOM05D005440 ORTHO05D007314 1.5e-146 523.5 404 66.3
AL4G27520 Arabidopsis lyrata HOM05D005440 ORTHO05D007314 7.4e-146 521.2 395 67.3
Sp4g14550 Schrenkiella parvula HOM05D005440 ORTHO05D007314 1.3e-145 520.4 402 66.7
Ca_16308_v3 Cicer arietinum L. HOM05D005440 ORTHO05D007314 3.7e-145 518.8 403 66.0
BcaB06g28584 Brassica carinata HOM05D005440 ORTHO05D007314 8.2e-145 517.7 410 65.6
CAN.G1156.52 Capsicum annuum HOM05D005440 ORTHO05D007314 8.2e-145 517.7 403 65.8
Rhsim12G0014000 Rhododendron simsii HOM05D005440 ORTHO05D007314 1.1e-144 517.3 405 67.2
Eucgr.K01335 Eucalyptus grandis HOM05D005440 ORTHO05D007314 1.4e-144 516.9 447 62.2
C04p61670 Brassica napus HOM05D005440 ORTHO05D007314 3.1e-144 515.8 401 66.6
A04p24740 Brassica napus HOM05D005440 ORTHO05D007314 4.1e-144 515.4 401 65.6
Aqoxy1G01485 Aquilegia oxysepala HOM05D005440 ORTHO05D007314 5.3e-144 515.0 404 65.8
BcaC02g07946 Brassica carinata HOM05D005440 ORTHO05D007314 1.2e-143 513.8 401 66.6
BolC4t27650H Brassica oleracea HOM05D005440 ORTHO05D007314 1.2e-143 513.8 401 66.6
Sc15g0002420 Simmondsia chinensis HOM05D005440 ORTHO05D007314 1.2e-143 513.8 409 64.3
AT2G32170 Arabidopsis thaliana HOM05D005440 ORTHO05D007314 2.6e-143 512.7 403 66.3
CSS0043590 Camellia sinensis var. sinensis HOM05D005440 ORTHO05D007314 2.6e-143 512.7 392 67.6
CARHR125970 Cardamine hirsuta HOM05D005440 ORTHO05D007314 3.5e-143 512.3 403 66.3
FvH4_6g39770 Fragaria vesca HOM05D005440 ORTHO05D007314 8.5e-142 507.7 393 68.7
FAN02G0818 Fragaria x ananassa HOM05D005440 ORTHO05D007314 1.5e-141 506.9 400 68.2
Sopen05g034920 Solanum pennellii HOM05D005440 ORTHO05D007314 1.4e-139 500.4 405 64.9
BraA04t17992Z Brassica rapa HOM05D005440 ORTHO05D007314 2.3e-139 499.6 451 58.5
FAN14G2598 Fragaria x ananassa HOM05D005440 ORTHO05D007314 2.3e-139 499.6 396 67.7
Solyc05g056520.4 Solanum lycopersicum HOM05D005440 ORTHO05D007314 5.2e-139 498.4 405 64.9
Carub.0004s1349 Capsella rubella HOM05D005440 ORTHO05D007314 6.7e-139 498.0 401 64.3
PSO675G6996 Papaver somniferum HOM05D005440 ORTHO05D007314 8.8e-139 497.7 404 63.9
Cc07_g20260 Coffea canephora HOM05D005440 ORTHO05D007314 2.6e-138 496.1 410 63.7
Sabra16G0024900 Salix brachista HOM05D005440 ORTHO05D007314 4.4e-138 495.4 397 65.5
Migut.L00575 Erythranthe guttata HOM05D005440 ORTHO05D007314 1.3e-137 493.8 412 63.8
Sabra16G0027400 Salix brachista HOM05D005440 ORTHO05D007314 9.1e-136 487.6 397 64.7
HanXRQChr15g0468881 Helianthus annuus HOM05D005440 ORTHO05D007314 6.5e-134 481.5 407 63.6
MBI18_g10015_MAGBIO Magnolia biondii HOM05D005440 ORTHO05D007314 8.0e-132 474.6 397 62.2
PSO541G5910 Papaver somniferum HOM05D005440 ORTHO05D007314 1.8e-131 473.4 412 62.4
TWI60G0012 Tripterygium wilfordii HOM05D005440 ORTHO05D007314 1.8e-131 473.4 401 62.3
ECA233G3205 Erigeron canadensis HOM05D005440 ORTHO05D007314 3.0e-131 472.6 388 63.9
MSTRG.15262 Avicennia marina HOM05D005440 ORTHO05D007314 4.0e-131 472.2 416 61.1
HPP92_001868 Vanilla planifolia HOM05D005440 ORTHO05D007314 7.5e-130 468.0 416 59.6
ATR0763G213 Amborella trichopoda HOM05D005440 ORTHO05D007314 1.6e-127 460.3 405 60.7
Peaxi162Scf00525g00411 Petunia axillaris HOM05D005440 ORTHO05D007314 3.5e-127 459.1 415 59.0
Nitab4.5_0000496g0020 Nicotiana tabacum HOM05D005440 ORTHO05D007314 1.7e-126 456.8 425 58.1
DCAR_019996 Daucus carota HOM05D005440 ORTHO05D007314 4.2e-125 452.2 400 60.8
AUR62017608 Chenopodium quinoa HOM05D005440 ORTHO05D007314 6.1e-124 448.4 402 60.0
Os05g0511300 Oryza sativa ssp. japonica HOM05D005440 ORTHO05D007314 1.4e-123 447.2 416 58.4
AT2G32160 Arabidopsis thaliana HOM05D005440 ORTHO05D007314 1.8e-123 446.8 406 57.1
Actinidia12520 Actinidia chinensis HOM05D005440 ORTHO05D007314 2.6e-122 443.0 359 64.9
unitig_32.g10657 Utricularia gibba HOM05D005440 ORTHO05D007314 4.9e-121 438.7 399 58.4
vmacro08748 Vaccinium macrocarpon HOM05D005440 ORTHO05D007314 5.9e-119 431.8 408 58.3
Zm00001eb292540 Zea mays HOM05D005440 ORTHO05D007314 1.5e-117 427.2 415 56.1
ClCG11G016720 Citrullus lanatus HOM05D005440 ORTHO05D007314 4.3e-117 425.6 409 57.7
Oeu053137.1 Olea europaea HOM05D005440 ORTHO05D007314 1.4e-115 420.6 400 56.8
EL10Ac9g22859 Beta vulgaris HOM05D005440 ORTHO05D007314 1.1e-112 411.0 414 55.1
Dinv02983 Davidia involucrata HOM05D005440 ORTHO05D007314 1.1e-112 411.0 328 64.9
Aa31LG5G4880 Aethionema arabicum HOM05D005440 ORTHO05D007314 5.4e-112 408.7 393 56.7
AUR62015149 Chenopodium quinoa HOM05D005440 ORTHO05D007314 3.0e-110 402.9 442 52.3
SEGI_34757 Sequoiadendron giganteum HOM05D005440 ORTHO05D007314 8.6e-110 401.4 482 48.1
SalBow5G0813 Salvia bowleyana HOM05D005440 ORTHO05D007314 8.9e-107 391.3 321 62.9
Psat5g108080 Pisum sativum HOM05D005440 ORTHO05D007314 2.6e-106 389.8 344 60.2
Pp3c17_14810 Physcomitrium patens HOM05D005440 ORTHO05D007314 4.4e-106 389.0 441 50.6
Thhalv10017571m.g Eutrema salsugineum HOM05D005440 ORTHO05D007314 9.8e-106 387.9 325 64.3
Carub.0004s1348 Capsella rubella HOM05D005440 ORTHO05D007314 4.9e-105 385.6 405 52.6
FAN05G0095 Fragaria x ananassa HOM05D005440 ORTHO05D007314 9.2e-104 381.3 395 56.5
Sabra16G0025200 Salix brachista HOM05D005440 ORTHO05D007314 1.3e-102 377.5 337 60.8
Lsat_1_v5_gn_5_68301 Lactuca sativa HOM05D005440 ORTHO05D007314 3.9e-102 375.9 416 51.7
AagrBONN_evm.TU.Sc2ySwM_368.3314 Anthoceros agrestis HOM05D005440 ORTHO05D007314 1.1e-99 367.9 390 51.8
Mapoly0014s0077 Marchantia polymorpha HOM05D005440 ORTHO05D007314 1.9e-96 357.1 465 44.7
CDE06G0633 Ceratophyllum demersum HOM05D005440 ORTHO05D007314 5.4e-96 355.5 323 58.2
Haze_13637 Corylus avellana HOM05D005440 ORTHO05D007314 6.0e-95 352.1 336 59.2
QL04p060188 Quercus lobata HOM05D005440 ORTHO05D007314 6.0e-95 352.1 197 83.8
Pp3c1_31970 Physcomitrium patens HOM05D005440 ORTHO05D007314 2.3e-94 350.1 432 45.6
Nitab4.5_0002704g0030 Nicotiana tabacum HOM05D005440 ORTHO05D007314 3.3e-93 346.3 433 51.5
Sabra06G0017100 Salix brachista HOM05D005440 ORTHO05D007314 1.4e-91 340.9 441 50.8
Sabra16G0027100 Salix brachista HOM05D005440 ORTHO05D007314 3.1e-91 339.7 285 63.9
Ah.01g013380 Amaranthus hybridus HOM05D005440 ORTHO05D007314 1.3e-89 334.3 343 55.4
arahy.Tifrunner.gnm1.ann1.Z94T11 Arachis hypogaea HOM05D005440 ORTHO05D007314 4.6e-87 325.9 322 56.8
FAN09G4325 Fragaria x ananassa HOM05D005440 ORTHO05D007314 8.1e-84 315.1 371 50.4
DCAR_009586 Daucus carota HOM05D005440 ORTHO05D007314 1.2e-79 301.2 192 74.0
CBR_g29536 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-77 294.3 559 36.5
SMO358G0560 Selaginella moellendorffii HOM05D005440 ORTHO05D007314 1.1e-69 268.1 182 66.5
Cre03.g188950 Chlamydomonas reinhardtii HOM05D005440 ORTHO05D007314 1.3e-57 228.0 406 35.7
MCO05G304 Micromonas commoda HOM05D005440 ORTHO05D007314 2.1e-55 220.7 387 34.6
PRCOL_00002828 Prasinoderma coloniale HOM05D005440 ORTHO05D007314 3.6e-47 193.4 206 45.6
Lj4C830T18 Lonicera japonica HOM05D005440 ORTHO05D007314 4.6e-47 193.0 113 79.6
CARHR125950 Cardamine hirsuta HOM05D005440 ORTHO05D007314 2.5e-45 187.2 109 81.7
CARHR125960 Cardamine hirsuta HOM05D005440 ORTHO05D007314 6.1e-39 166.0 118 65.3
Cfa026418 Carpinus fangiana HOM05D005440 ORTHO05D007314 1.8e-38 164.5 188 43.1
Atru.ctg1434.11 Acer truncatum HOM05D005440 ORTHO05D007314 8.8e-38 162.2 255 37.6
Hund08219 Selenicereus undatus HOM05D005440 ORTHO05D007314 1.0e-33 148.7 86 81.4
Aqoxy1G03388 Aquilegia oxysepala HOM05D005440 ORTHO05D007314 1.3e-33 148.3 323 36.2
SGA_v2.0_scaffold35G13960 Striga asiatica HOM05D005440 ORTHO05D007314 2.3e-22 110.9 59 83.1
Hund08218 Selenicereus undatus HOM05D005440 ORTHO05D007314 1.1e-19 102.1 81 60.5
RcHm_v2.0_Chr2g0172691 Rosa chinensis HOM05D005440 ORTHO05D007314 4.1e-19 100.1 56 78.6
Psat5g108160 Pisum sativum HOM05D005440 ORTHO05D007314 2.0e-18 97.8 50 86.0
CARHR125940 Cardamine hirsuta HOM05D005440 ORTHO05D034043 6.5e-17 92.8 69 58.0
Dinv02985 Davidia involucrata HOM05D005440 ORTHO05D034043 3.6e-15 87.0 59 72.9
SEGI_40090 Sequoiadendron giganteum HOM05D005440 ORTHO05D034043 5.2e-14 83.2 70 55.7
RcHm_v2.0_Chr5g0059521 Rosa chinensis HOM05D005440 ORTHO05D007314 1.2e-10 72.0 41 78.0
QL04p060164 Quercus lobata HOM05D005440 ORTHO05D007314 1.8e-06 58.2 122 36.9


User provided reference genes

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