Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 2.0e-270 935.3 496 100.0
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 1.1e-167 594.0 500 65.2
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 4.6e-166 588.6 495 63.4
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 1.3e-165 587.0 495 63.0
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 3.0e-165 585.9 498 64.9
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 6.6e-165 584.7 499 63.5
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 8.6e-165 584.3 499 63.5
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 9.5e-164 580.9 496 63.3
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 1.2e-163 580.5 496 61.9
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.6e-163 580.1 497 62.2
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 8.1e-163 577.8 496 61.5
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 6.8e-162 574.7 497 60.8
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 1.3e-160 570.5 499 62.5
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 1.3e-160 570.5 499 62.5
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 6.4e-160 568.2 497 61.2
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 3.2e-159 565.8 495 60.2
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 6.6e-157 558.1 496 61.5
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 3.4e-153 545.8 497 59.4
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 4.4e-153 545.4 496 58.9
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 1.4e-151 540.4 492 56.9
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 1.2e-150 537.3 419 63.5
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 1.2e-150 537.3 498 58.0
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 2.7e-150 536.2 432 62.5
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 1.0e-149 534.3 496 57.7
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 1.3e-149 533.9 500 60.2
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 3.3e-148 529.3 499 57.5
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 4.7e-147 525.4 496 56.9
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 5.2e-146 521.9 507 55.8
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 1.2e-145 520.8 496 56.5
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 4.9e-144 515.4 492 55.5
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 2.4e-143 513.1 500 59.0
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 1.2e-142 510.8 497 54.3
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 7.8e-142 508.1 499 58.1
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 1.0e-141 507.7 498 58.2
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 5.1e-141 505.4 494 57.1
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 5.6e-140 501.9 498 54.2
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 1.3e-139 500.7 494 54.7
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 1.6e-139 500.4 496 56.7
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 3.6e-139 499.2 496 53.6
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 4.8e-139 498.8 500 56.2
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 1.1e-138 497.7 496 55.4
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 1.1e-138 497.7 496 56.7
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 3.1e-138 496.1 496 54.4
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 3.1e-138 496.1 498 54.8
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 4.0e-138 495.7 497 54.3
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 4.0e-138 495.7 498 56.2
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 5.3e-138 495.4 496 53.4
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 6.9e-138 495.0 496 55.8
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 9.0e-138 494.6 517 52.4
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 2.0e-137 493.4 496 55.4
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 9.9e-137 491.1 496 50.6
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 1.1e-135 487.6 496 52.8
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 1.4e-135 487.3 498 54.4
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 7.1e-135 485.0 496 50.0
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 9.3e-135 484.6 499 55.5
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 1.2e-134 484.2 497 51.3
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 3.0e-133 479.6 501 55.3
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 8.7e-133 478.0 497 51.7
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 8.7e-133 478.0 497 53.5
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 8.7e-133 478.0 495 50.9
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 3.3e-132 476.1 495 51.1
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 1.6e-131 473.8 497 51.1
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 2.1e-131 473.4 499 54.7
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 2.1e-131 473.4 499 49.9
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 2.8e-131 473.0 496 54.0
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 3.6e-131 472.6 499 54.5
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 1.1e-130 471.1 508 55.1
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 1.4e-130 470.7 496 52.0
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 1.8e-130 470.3 492 52.4
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 1.8e-130 470.3 497 51.7
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 1.2e-129 467.6 498 54.6
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 2.0e-129 466.8 497 55.1
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 2.0e-129 466.8 499 51.3
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 3.4e-129 466.1 493 50.9
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 9.9e-129 464.5 497 51.7
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 6.0e-126 455.3 494 52.4
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 1.0e-125 454.5 497 50.9
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 3.0e-125 453.0 498 49.2
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 8.7e-125 451.4 497 51.1
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 1.6e-123 447.2 497 49.9
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 1.6e-123 447.2 497 51.1
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 8.2e-123 444.9 498 49.6
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 1.4e-122 444.1 496 50.0
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 1.4e-122 444.1 506 48.4
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 2.0e-121 440.3 496 52.0
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 4.9e-120 435.6 510 52.5
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 8.4e-120 434.9 376 62.2
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 1.6e-118 430.6 504 47.4
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 4.6e-118 429.1 467 54.8
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 4.8e-115 419.1 496 50.6
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 4.8e-115 419.1 490 45.9
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 1.8e-114 417.2 503 46.7
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 1.0e-112 411.4 342 58.8
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 2.1e-110 403.7 476 48.1
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 2.4e-106 390.2 467 46.7
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 2.1e-102 377.1 496 45.2
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 7.9e-102 375.2 382 53.4
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 2.6e-97 360.1 335 52.5
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 5.5e-95 352.4 269 64.3
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 1.2e-94 351.3 513 42.7
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 8.2e-91 338.6 396 47.0
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 1.1e-79 301.6 327 52.6
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 2.8e-75 287.0 198 67.2
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 2.8e-75 287.0 198 67.2
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 7.7e-73 278.9 219 61.6
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 1.4e-61 241.5 506 34.8
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 4.0e-61 240.0 338 43.2
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 5.2e-61 239.6 514 33.9
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 4.9e-59 233.0 160 65.6
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 3.2e-58 230.3 386 35.0
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 5.0e-48 196.4 413 30.0
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 1.1e-37 162.2 365 29.3
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 8.1e-30 136.0 178 54.5
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 5.2e-29 133.3 176 54.0
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 7.6e-28 129.4 116 56.0
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 1.1e-26 125.6 142 45.8
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 2.4e-26 124.4 142 45.8
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 3.0e-24 117.5 115 48.7
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 5.1e-24 116.7 171 37.4
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 6.2e-22 109.8 115 49.6
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 7.6e-20 102.8 122 46.7
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 4.6e-17 93.6 116 46.6
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 3.3e-15 87.4 163 32.5


User provided reference genes

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