Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc8.234 Carica papaya HOM05D005864 ORTHO05D006770 3.7e-233 811.2 420 100.0
Atru.chr6.3147 Acer truncatum HOM05D005864 ORTHO05D006770 5.2e-94 349.0 441 50.8
CiPaw.04G117700 Carya illinoinensis HOM05D005864 ORTHO05D006770 4.5e-90 335.9 456 48.5
GSVIVG01030622001 Vitis vinifera HOM05D005864 ORTHO05D006770 4.5e-90 335.9 449 49.9
CiPaw.03G162800 Carya illinoinensis HOM05D005864 ORTHO05D006770 6.1e-87 325.5 453 49.4
Dinv39688 Davidia involucrata HOM05D005864 ORTHO05D006770 8.0e-87 325.1 449 47.9
Thecc.02G162100 Theobroma cacao HOM05D005864 ORTHO05D006770 1.8e-86 323.9 449 47.4
QL08p033779 Quercus lobata HOM05D005864 ORTHO05D006770 5.2e-86 322.4 448 48.9
TWI36G0516 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 2.2e-81 307.0 462 43.1
Hma1.2p1_0613F.1_g189160 Hydrangea macrophylla HOM05D005864 ORTHO05D006770 3.8e-81 306.2 450 45.6
Lj3g0027429 Lotus japonicus HOM05D005864 ORTHO05D006770 7.2e-80 302.0 444 44.6
Potri.007G121700 Populus trichocarpa HOM05D005864 ORTHO05D006770 6.1e-79 298.9 453 45.5
Duzib052G0164 Durio zibethinus HOM05D005864 ORTHO05D006770 4.4e-77 292.7 455 45.1
Nn1g07000 Nelumbo nucifera HOM05D005864 ORTHO05D006770 1.1e-75 288.1 453 44.4
Haze_12896 Corylus avellana HOM05D005864 ORTHO05D006770 2.4e-75 287.0 474 43.7
Psat7g195480 Pisum sativum HOM05D005864 ORTHO05D006770 2.7e-74 283.5 441 42.6
FAN05G0568 Fragaria x ananassa HOM05D005864 ORTHO05D006770 3.5e-74 283.1 412 46.8
Prupe.3G220100 Prunus persica HOM05D005864 ORTHO05D006770 3.5e-74 283.1 449 43.7
Glyma.06G306800 Glycine max HOM05D005864 ORTHO05D006770 1.0e-73 281.6 437 42.8
TWI75G1887 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 2.9e-73 280.0 429 43.6
FAN09G3055 Fragaria x ananassa HOM05D005864 ORTHO05D006770 1.9e-72 277.3 423 44.4
Lalb_Chr19g0135701 Lupinus albus HOM05D005864 ORTHO05D006770 9.5e-72 275.0 441 44.2
FvH4_6g43530 Fragaria vesca HOM05D005864 ORTHO05D006770 4.7e-71 272.7 436 44.5
arahy.Tifrunner.gnm1.ann1.UG5YAZ Arachis hypogaea HOM05D005864 ORTHO05D006770 5.7e-69 265.8 519 38.9
Gohir.A03G163800 Gossypium hirsutum HOM05D005864 ORTHO05D006770 1.3e-68 264.6 447 43.0
arahy.Tifrunner.gnm1.ann1.VAE2IM Arachis hypogaea HOM05D005864 ORTHO05D006770 1.7e-68 264.2 514 38.9
Medtr4g046697 Medicago truncatula HOM05D005864 ORTHO05D006770 2.8e-68 263.5 437 41.6
Phvul.011G106100 Phaseolus vulgaris HOM05D005864 ORTHO05D006770 1.8e-67 260.8 436 42.0
Glyma.12G101400 Glycine max HOM05D005864 ORTHO05D006770 7.0e-67 258.8 437 40.0
VMungo1127G2082 Vigna mungo HOM05D005864 ORTHO05D006770 7.0e-67 258.8 442 40.5
FAN14G4164 Fragaria x ananassa HOM05D005864 ORTHO05D006770 1.2e-66 258.1 455 41.8
THA.LOC104809073 Tarenaya hassleriana HOM05D005864 ORTHO05D006770 3.5e-66 256.5 393 44.0
MELO3C018803.2 Cucumis melo HOM05D005864 ORTHO05D006770 1.0e-65 255.0 439 40.5
Manes.12G077600 Manihot esculenta HOM05D005864 ORTHO05D006770 1.7e-65 254.2 410 44.9
Gohir.D02G187200 Gossypium hirsutum HOM05D005864 ORTHO05D006770 1.1e-64 251.5 435 40.9
Actinidia12503 Actinidia chinensis HOM05D005864 ORTHO05D006770 3.3e-64 250.0 455 39.3
Eucgr.K00811 Eucalyptus grandis HOM05D005864 ORTHO05D006770 7.3e-64 248.8 441 42.4
Sc21g0001650 Simmondsia chinensis HOM05D005864 ORTHO05D006770 7.3e-64 248.8 460 41.3
Ciclev10015598m.g Citrus clementina HOM05D005864 ORTHO05D006770 1.2e-63 248.1 419 40.8
Ca_19101_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 2.0e-61 240.7 384 43.2
FAN02G2067 Fragaria x ananassa HOM05D005864 ORTHO05D006770 2.2e-60 237.3 366 44.8
COL.COLO4_12982 Corchorus olitorius HOM05D005864 ORTHO05D006770 3.3e-56 223.4 397 41.3
CsaV3_7G003760 Cucumis sativus L. HOM05D005864 ORTHO05D006770 4.3e-56 223.0 438 38.4
Sabra07G0098400 Salix brachista HOM05D005864 ORTHO05D006770 5.6e-56 222.6 393 42.5
Nitab4.5_0006207g0020 Nicotiana tabacum HOM05D005864 ORTHO05D006770 1.4e-54 218.0 477 37.3
MSTRG.6547 Avicennia marina HOM05D005864 ORTHO05D006770 2.3e-54 217.2 452 39.2
Dinv18530 Davidia involucrata HOM05D005864 ORTHO05D006770 5.2e-54 216.1 284 48.9
SHI10272 Sapria himalayana HOM05D005864 ORTHO05D006770 1.5e-53 214.5 430 40.0
CARHR097800 Cardamine hirsuta HOM05D005864 ORTHO05D006770 3.4e-53 213.4 444 37.8
Eucgr.K00844 Eucalyptus grandis HOM05D005864 ORTHO05D006770 4.4e-53 213.0 449 39.4
TAR624G1226 Trochodendron aralioides HOM05D005864 ORTHO05D006770 1.3e-52 211.5 309 47.6
Aa31LG8G8400 Aethionema arabicum HOM05D005864 ORTHO05D006770 3.7e-52 209.9 438 38.6
ClCG02G001780 Citrullus lanatus HOM05D005864 ORTHO05D006770 8.3e-52 208.8 507 34.1
SalBow7G0586 Salvia bowleyana HOM05D005864 ORTHO05D006770 8.3e-52 208.8 455 38.2
CDE05G3135 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 5.4e-51 206.1 457 37.0
ATR0794G118 Amborella trichopoda HOM05D005864 ORTHO05D006770 9.2e-51 205.3 472 36.0
Sed0020795 Sechium edule HOM05D005864 ORTHO05D006770 1.6e-50 204.5 444 37.6
HPP92_002197 Vanilla planifolia HOM05D005864 ORTHO05D006770 1.6e-50 204.5 458 35.6
PGR142G4274 Punica granatum HOM05D005864 ORTHO05D006770 3.5e-50 203.4 441 37.9
Peaxi162Scf00012g03212 Petunia axillaris HOM05D005864 ORTHO05D006770 7.8e-50 202.2 450 36.4
Thhalv10020800m.g Eutrema salsugineum HOM05D005864 ORTHO05D006770 1.3e-49 201.4 449 36.7
PSO675G8332 Papaver somniferum HOM05D005864 ORTHO05D006770 2.3e-49 200.7 464 36.4
Sp3g19810 Schrenkiella parvula HOM05D005864 ORTHO05D006770 1.9e-48 197.6 455 36.9
BcaB04g20556 Brassica carinata HOM05D005864 ORTHO05D006770 2.5e-48 197.2 450 37.3
Cc05_g05040 Coffea canephora HOM05D005864 ORTHO05D006770 4.3e-48 196.4 470 35.3
AL3G35960 Arabidopsis lyrata HOM05D005864 ORTHO05D006770 2.1e-47 194.1 374 38.5
AT3G21810 Arabidopsis thaliana HOM05D005864 ORTHO05D006770 3.6e-47 193.4 462 35.5
Oeu041940.1 Olea europaea HOM05D005864 ORTHO05D006770 3.6e-47 193.4 570 32.1
C01p42370 Brassica napus HOM05D005864 ORTHO05D006770 1.4e-46 191.4 451 37.3
BcaC09g49121 Brassica carinata HOM05D005864 ORTHO05D006770 1.8e-46 191.0 453 37.7
MD09G1105200 Malus domestica HOM05D005864 ORTHO05D006770 2.3e-46 190.7 400 40.0
Aqoxy4G02070 Aquilegia oxysepala HOM05D005864 ORTHO05D006770 6.8e-46 189.1 464 33.6
Solyc12g005770.3 Solanum lycopersicum HOM05D005864 ORTHO05D006770 2.0e-45 187.6 486 35.4
BolC1t04192H Brassica oleracea HOM05D005864 ORTHO05D006770 2.6e-45 187.2 453 37.3
A01p33130 Brassica napus HOM05D005864 ORTHO05D006770 2.9e-44 183.7 455 37.1
SGA_v2.0_scaffold70G23416 Striga asiatica HOM05D005864 ORTHO05D006770 4.9e-44 183.0 441 35.6
PSO541G3214 Papaver somniferum HOM05D005864 ORTHO05D006770 8.3e-44 182.2 512 33.4
Gorai.005G209600 Gossypium raimondii HOM05D005864 ORTHO05D006770 1.4e-43 181.4 345 38.6
Sed0014520 Sechium edule HOM05D005864 ORTHO05D006770 7.1e-43 179.1 370 38.9
CAN.G80.20 Capsicum annuum HOM05D005864 ORTHO05D006770 1.6e-42 177.9 477 35.2
Rhsim06G0158200 Rhododendron simsii HOM05D005864 ORTHO05D006770 1.6e-42 177.9 460 34.3
BraA01t03436Z Brassica rapa HOM05D005864 ORTHO05D006770 2.1e-42 177.6 450 36.2
Nitab4.5_0000631g0060 Nicotiana tabacum HOM05D005864 ORTHO05D006770 7.8e-42 175.6 352 37.8
Lsat_1_v5_gn_3_43700 Lactuca sativa HOM05D005864 ORTHO05D006770 1.9e-40 171.0 464 34.9
HanXRQChr07g0191611 Helianthus annuus HOM05D005864 ORTHO05D006770 7.3e-40 169.1 482 34.2
Os02g0161200 Oryza sativa ssp. japonica HOM05D005864 ORTHO05D006770 2.1e-39 167.5 450 32.4
Migut.M00396 Erythranthe guttata HOM05D005864 ORTHO05D006770 6.2e-39 166.0 450 36.0
TPR.G19040 Trifolium pratense HOM05D005864 ORTHO05D006770 1.4e-38 164.9 410 34.9
RcHm_v2.0_Chr2g0160051 Rosa chinensis HOM05D005864 ORTHO05D006770 6.8e-38 162.5 196 49.0
Sopen12g001690 Solanum pennellii HOM05D005864 ORTHO05D006770 5.8e-37 159.5 474 33.3
unitig_699.g19613 Utricularia gibba HOM05D005864 ORTHO05D006770 5.8e-37 159.5 455 33.8
Zm00001eb207650 Zea mays HOM05D005864 ORTHO05D006770 2.9e-36 157.1 447 32.4
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.8e-36 156.8 503 30.6
DCAR_021187 Daucus carota HOM05D005864 ORTHO05D006770 5.4e-35 152.9 337 40.4
EL10Ac9g20653 Beta vulgaris HOM05D005864 ORTHO05D006770 7.1e-35 152.5 424 32.1
CDE05G1184 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 1.0e-33 148.7 423 34.3
Actinidia32077 Actinidia chinensis HOM05D005864 ORTHO05D006770 5.1e-33 146.4 334 37.1
AUR62025062 Chenopodium quinoa HOM05D005864 ORTHO05D006770 2.5e-32 144.1 543 28.4
vmacro12226 Vaccinium macrocarpon HOM05D005864 ORTHO05D006770 2.1e-31 141.0 503 30.2
AUR62037142 Chenopodium quinoa HOM05D005864 ORTHO05D006770 1.8e-30 137.9 413 32.2
unitig_85.g27303 Utricularia gibba HOM05D005864 ORTHO05D006770 2.4e-30 137.5 449 30.3
Carub.0003s2189 Capsella rubella HOM05D005864 ORTHO05D006770 7.6e-29 132.5 406 30.3
TAR626G1271 Trochodendron aralioides HOM05D005864 ORTHO05D006770 9.9e-29 132.1 140 52.9
Ah.01g003700 Amaranthus hybridus HOM05D005864 ORTHO05D006770 4.9e-28 129.8 375 30.9
SEGI_09449 Sequoiadendron giganteum HOM05D005864 ORTHO05D006770 7.1e-27 125.9 446 30.7
PGSC0003DMG401024331 Solanum tuberosum HOM05D005864 ORTHO05D006770 6.2e-23 112.8 449 29.8
RcHm_v2.0_Chr2g0160061 Rosa chinensis HOM05D005864 ORTHO05D006770 3.1e-22 110.5 196 44.4
FAN09G4739 Fragaria x ananassa HOM05D005864 ORTHO05D006770 1.5e-21 108.2 90 62.2
TAR626G0200 Trochodendron aralioides HOM05D005864 ORTHO05D006770 1.3e-15 88.6 162 42.6
Mapoly0099s0053 Marchantia polymorpha HOM05D005864 ORTHO05D006770 8.1e-15 85.9 285 31.9
CSS0029042 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 2.6e-13 80.9 175 37.7
Ca_27661_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 2.2e-12 77.8 155 37.4
Ca_27662_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 2.2e-12 77.8 155 37.4
Pp3c11_20880 Physcomitrium patens HOM05D005864 ORTHO05D006770 9.3e-11 72.4 195 33.3
Atru.chr6.3143 Acer truncatum HOM05D067846 ORTHO05D006770 1.2e-10 72.0 131 41.2
CDE05G1677 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 1.2e-10 72.0 40 77.5
Atru.chr6.3144 Acer truncatum HOM05D067846 ORTHO05D006770 2.7e-10 70.9 131 40.5
Zm00001eb273610 Zea mays HOM05D005864 ORTHO05D006770 3.5e-10 70.5 269 30.5
CSS0011199 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 2.3e-09 67.8 101 47.5
TAR626G0331 Trochodendron aralioides HOM05D005864 ORTHO05D006770 5.1e-09 66.6 77 49.4
SMO356G0193 Selaginella moellendorffii HOM05D005864 ORTHO05D006770 5.6e-08 63.2 229 30.6
Eucgr.K00850 Eucalyptus grandis HOM05D005864 ORTHO05D006770 1.3e-07 62.0 107 43.9
Pp3c7_5470 Physcomitrium patens HOM05D005864 ORTHO05D006770 4.8e-07 60.1 248 29.4
TAR375G0046 Trochodendron aralioides HOM05D005864 ORTHO05D006770 3.1e-06 57.4 42 59.5
TAR372G0002 Trochodendron aralioides HOM05D005864 ORTHO05D006770 6.9e-06 56.2 42 59.5


User provided reference genes

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