Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc8.207 Carica papaya HOM05D006061 ORTHO05D007450 4.6e-155 551.2 281 100.0
Thecc.01G244800 Theobroma cacao HOM05D006061 ORTHO05D007450 8.8e-98 360.9 277 65.3
Atru.chr5.1926 Acer truncatum HOM05D006061 ORTHO05D007450 1.3e-96 357.1 277 64.3
Prupe.8G209500 Prunus persica HOM05D006061 ORTHO05D007450 3.7e-96 355.5 277 62.5
COL.COLO4_08163 Corchorus olitorius HOM05D006061 ORTHO05D007450 6.3e-96 354.8 277 63.9
Duzib138G1183 Durio zibethinus HOM05D006061 ORTHO05D007450 6.9e-95 351.3 277 63.2
Gorai.007G151600 Gossypium raimondii HOM05D006061 ORTHO05D007450 3.4e-94 349.0 277 63.5
Potri.014G194800 Populus trichocarpa HOM05D006061 ORTHO05D007450 2.2e-93 346.3 277 59.9
Gohir.D11G141300 Gossypium hirsutum HOM05D006061 ORTHO05D007450 8.5e-93 344.4 280 62.9
TAR365G1230 Trochodendron aralioides HOM05D006061 ORTHO05D007450 1.9e-92 343.2 278 63.3
Gohir.A11G135100 Gossypium hirsutum HOM05D006061 ORTHO05D007450 5.5e-92 341.7 280 62.5
Cfa002517 Carpinus fangiana HOM05D006061 ORTHO05D007450 9.4e-92 340.9 277 62.8
Manes.12G040800 Manihot esculenta HOM05D006061 ORTHO05D007450 2.7e-91 339.3 277 62.5
MD10G1171000 Malus domestica HOM05D006061 ORTHO05D007450 1.0e-90 337.4 277 59.6
Ciclev10019392m.g Citrus clementina HOM05D006061 ORTHO05D007450 2.6e-89 332.8 277 60.6
Sabra14G0142900 Salix brachista HOM05D006061 ORTHO05D007450 5.7e-89 331.6 303 54.8
TWI59G0704 Tripterygium wilfordii HOM05D006061 ORTHO05D007450 1.7e-88 330.1 278 60.8
FvH4_2g19870 Fragaria vesca HOM05D006061 ORTHO05D007450 3.7e-88 328.9 277 58.8
CiPaw.04G108700 Carya illinoinensis HOM05D006061 ORTHO05D007450 1.1e-87 327.4 278 62.2
RcHm_v2.0_Chr6g0285561 Rosa chinensis HOM05D006061 ORTHO05D007450 7.0e-87 324.7 277 59.2
CSS0041718 Camellia sinensis var. sinensis HOM05D006061 ORTHO05D007450 4.5e-86 322.0 277 57.8
Ca_08767_v3 Cicer arietinum L. HOM05D006061 ORTHO05D007450 2.9e-85 319.3 278 59.4
Glyma.19G171100 Glycine max HOM05D006061 ORTHO05D007450 1.9e-84 316.6 278 59.7
VMungo1383G3365 Vigna mungo HOM05D006061 ORTHO05D007450 1.9e-84 316.6 278 59.0
Lj1g0026990 Lotus japonicus HOM05D006061 ORTHO05D007450 2.5e-84 316.2 278 58.3
Actinidia30104 Actinidia chinensis HOM05D006061 ORTHO05D007450 3.2e-84 315.8 277 57.4
ClCG09G009420 Citrullus lanatus HOM05D006061 ORTHO05D007450 5.5e-84 315.1 277 58.1
Nn1g03086 Nelumbo nucifera HOM05D006061 ORTHO05D007450 1.6e-83 313.5 278 59.4
Phvul.001G168300 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 1.6e-83 313.5 278 58.3
MELO3C024149.2 Cucumis melo HOM05D006061 ORTHO05D007450 2.1e-83 313.2 277 58.5
Sed0025129 Sechium edule HOM05D006061 ORTHO05D007450 8.0e-83 311.2 277 58.1
THA.LOC104814544 Tarenaya hassleriana HOM05D006061 ORTHO05D007450 8.0e-83 311.2 279 58.1
CsaV3_7G025440 Cucumis sativus L. HOM05D006061 ORTHO05D007450 1.4e-82 310.5 280 58.9
FAN27G0211 Fragaria x ananassa HOM05D006061 ORTHO05D007450 1.4e-82 310.5 253 60.5
Eucgr.H00824 Eucalyptus grandis HOM05D006061 ORTHO05D007450 2.6e-81 306.2 278 57.2
Haze_24749 Corylus avellana HOM05D006061 ORTHO05D007450 4.4e-81 305.4 284 57.7
Glyma.03G169900 Glycine max HOM05D006061 ORTHO05D007450 1.7e-80 303.5 278 57.6
arahy.Tifrunner.gnm1.ann1.4WTK5H Arachis hypogaea HOM05D006061 ORTHO05D007450 3.7e-80 302.4 269 58.7
FAN15G2648 Fragaria x ananassa HOM05D006061 ORTHO05D007450 4.8e-80 302.0 277 56.3
vmacro02729 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 6.3e-80 301.6 277 57.4
arahy.Tifrunner.gnm1.ann1.J8EIPB Arachis hypogaea HOM05D006061 ORTHO05D007450 1.4e-79 300.4 269 58.4
MBI07_g08916_MAGBIO Magnolia biondii HOM05D006061 ORTHO05D007450 1.8e-79 300.1 281 55.9
TPR.G7560 Trifolium pratense HOM05D006061 ORTHO05D007450 5.3e-79 298.5 287 56.1
Lj1A80G16 Lonicera japonica HOM05D006061 ORTHO05D007450 1.2e-78 297.4 278 54.3
PGR083G1193 Punica granatum HOM05D006061 ORTHO05D007450 4.5e-78 295.4 277 53.4
Psat3g050240 Pisum sativum HOM05D006061 ORTHO05D007450 1.3e-77 293.9 280 55.7
BcaC06g36697 Brassica carinata HOM05D006061 ORTHO05D007450 1.7e-77 293.5 279 56.6
C07p00980 Brassica napus HOM05D006061 ORTHO05D007450 1.7e-77 293.5 279 56.6
BolC7t40535H Brassica oleracea HOM05D006061 ORTHO05D007450 1.7e-77 293.5 279 56.6
A07p00530 Brassica napus HOM05D006061 ORTHO05D007450 5.0e-77 292.0 279 56.3
BraA07t27847Z Brassica rapa HOM05D006061 ORTHO05D007450 5.0e-77 292.0 279 56.3
Sc05g0002480 Simmondsia chinensis HOM05D006061 ORTHO05D007450 1.9e-76 290.0 277 53.1
CANSAT01G1389 Cannabis sativa HOM05D006061 ORTHO05D007450 1.6e-75 287.0 279 54.5
BcaB03g16813 Brassica carinata HOM05D006061 ORTHO05D007450 1.4e-74 283.9 279 55.6
PSO170G3920 Papaver somniferum HOM05D006061 ORTHO05D007450 8.8e-74 281.2 279 53.0
Aa31LG8G17130 Aethionema arabicum HOM05D006061 ORTHO05D007450 1.5e-73 280.4 279 54.5
Thhalv10001935m.g Eutrema salsugineum HOM05D006061 ORTHO05D007450 2.0e-73 280.0 279 55.2
Sp3g33450 Schrenkiella parvula HOM05D006061 ORTHO05D007450 2.6e-73 279.6 279 53.8
Hund05498 Selenicereus undatus HOM05D006061 ORTHO05D007450 2.6e-73 279.6 277 51.3
Rhsim13G0041800 Rhododendron simsii HOM05D006061 ORTHO05D000758 1.3e-72 277.3 242 58.3
Medtr7g099450 Medicago truncatula HOM05D006061 ORTHO05D007450 2.2e-72 276.6 283 54.8
AT2G20210 Arabidopsis thaliana HOM05D006061 ORTHO05D007450 1.8e-71 273.5 279 54.1
GSVIVG01028489001 Vitis vinifera HOM05D006061 ORTHO05D007450 7.0e-71 271.6 227 62.1
Carub.0003s3454 Capsella rubella HOM05D006061 ORTHO05D007450 9.1e-71 271.2 279 53.4
AL3G47870 Arabidopsis lyrata HOM05D006061 ORTHO05D007450 4.5e-70 268.9 279 53.0
PGSC0003DMG401020085 Solanum tuberosum HOM05D006061 ORTHO05D007450 4.5e-70 268.9 277 53.1
CARHR110700 Cardamine hirsuta HOM05D006061 ORTHO05D007450 1.0e-69 267.7 276 53.6
Sopen06g035030 Solanum pennellii HOM05D006061 ORTHO05D007450 1.3e-69 267.3 277 53.1
Solyc06g083640.4 Solanum lycopersicum HOM05D006061 ORTHO05D007450 2.3e-69 266.5 277 52.7
Ah.15g093400 Amaranthus hybridus HOM05D006061 ORTHO05D007450 2.9e-69 266.2 277 51.3
EL10Ac7g17761 Beta vulgaris HOM05D006061 ORTHO05D007450 3.2e-68 262.7 277 49.1
AUR62008856 Chenopodium quinoa HOM05D006061 ORTHO05D007450 7.2e-68 261.5 277 49.8
Peaxi162Scf00517g00313 Petunia axillaris HOM05D006061 ORTHO05D007450 3.6e-67 259.2 277 50.5
HanXRQChr13g0409031 Helianthus annuus HOM05D006061 ORTHO05D007450 3.0e-66 256.1 277 49.5
SGA_v2.0_scaffold3G01591 Striga asiatica HOM05D006061 ORTHO05D007450 5.7e-65 251.9 278 51.4
AUR62025388 Chenopodium quinoa HOM05D006061 ORTHO05D007450 9.8e-65 251.1 292 46.9
Lsat_1_v5_gn_8_90281 Lactuca sativa HOM05D006061 ORTHO05D007450 1.7e-64 250.4 278 50.4
Aqoxy5G00054 Aquilegia oxysepala HOM05D006061 ORTHO05D007450 2.2e-64 250.0 264 52.3
Lalb_Chr01g0019411 Lupinus albus HOM05D006061 ORTHO05D007450 2.2e-64 250.0 224 58.5
MSTRG.12506 Avicennia marina HOM05D006061 ORTHO05D007450 4.9e-64 248.8 278 51.1
Nitab4.5_0002085g0150 Nicotiana tabacum HOM05D006061 ORTHO05D007450 4.1e-63 245.7 278 48.6
CAN.G771.51 Capsicum annuum HOM05D006061 ORTHO05D007450 9.2e-63 244.6 291 48.5
SalBow6G4925 Salvia bowleyana HOM05D006061 ORTHO05D007450 4.5e-62 242.3 278 49.3
Migut.N02246 Erythranthe guttata HOM05D006061 ORTHO05D007450 2.3e-61 240.0 278 48.2
Nitab4.5_0006211g0030 Nicotiana tabacum HOM05D006061 ORTHO05D007450 1.2e-59 234.2 278 48.2
Oeu039640.1 Olea europaea HOM05D006061 ORTHO05D007450 1.4e-58 230.7 224 54.0
ATR0787G120 Amborella trichopoda HOM05D006061 ORTHO05D007450 7.8e-54 214.9 272 45.2
SEGI_05721 Sequoiadendron giganteum HOM05D006061 ORTHO05D007450 3.4e-49 199.5 279 42.3
ECA236G2978 Erigeron canadensis HOM05D006061 ORTHO05D000758 6.2e-43 178.7 282 39.7
unitig_8.g4624 Utricularia gibba HOM05D006061 ORTHO05D007450 4.4e-41 172.6 249 41.8
Phvul.004G074200 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 8.4e-32 141.7 171 49.7
Cc01_g08490 Coffea canephora HOM05D006061 ORTHO05D007450 5.4e-31 139.0 132 53.8
Zm00001eb008990 Zea mays HOM05D006061 ORTHO05D007450 1.0e-29 134.8 149 51.0
SMO356G0042 Selaginella moellendorffii HOM05D006061 ORTHO05D007450 1.5e-28 131.0 258 36.8
Zm00001eb428270 Zea mays HOM05D006061 ORTHO05D007450 1.6e-27 127.5 156 48.7
Cc00_g31740 Coffea canephora HOM05D006061 ORTHO05D007450 2.1e-27 127.1 147 46.9
SHI26842 Sapria himalayana HOM05D006061 ORTHO05D007450 2.9e-24 116.7 148 46.6
Rhsim13G0055400 Rhododendron simsii HOM05D006061 ORTHO05D007450 1.1e-23 114.8 123 52.0
Zm00001eb120120 Zea mays HOM05D006061 ORTHO05D007450 2.4e-23 113.6 122 53.3
CARHR174390 Cardamine hirsuta HOM05D006061 ORTHO05D007450 1.5e-20 104.4 101 49.5
SHI26843 Sapria himalayana HOM05D006061 ORTHO05D007450 1.5e-20 104.4 199 35.2
CBR_g31999 Chara braunii HOM05D006061 ORTHO05D007450 3.3e-20 103.2 259 32.8
PSO675G3076 Papaver somniferum HOM05D006061 ORTHO05D007450 4.3e-20 102.8 231 34.6
Pp3c7_21970 Physcomitrium patens HOM05D006061 ORTHO05D007450 5.6e-20 102.4 286 29.7
Zm00001eb399320 Zea mays HOM05D000103 ORTHO05D007450 2.6e-17 93.6 113 48.7
Zm00001eb068850 Zea mays HOM05D006061 ORTHO05D007450 5.1e-13 79.3 92 50.0
PSO541G3330 Papaver somniferum HOM05D006061 ORTHO05D007450 2.4e-07 60.5 101 40.6


User provided reference genes

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