Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc8.111 Carica papaya HOM05D018895 ORTHO05D010851 2.2e-44 181.8 86 100.0
Cpa.g.c26396.1 Carica papaya HOM05D018895 ORTHO05D010851 1.1e-43 179.5 86 98.8
Cpa.g.c34278 Carica papaya HOM05D018895 ORTHO05D010851 1.1e-43 179.5 86 98.8
Cpa.g.sc8.112 Carica papaya HOM05D018895 ORTHO05D010851 1.1e-43 179.5 86 98.8
Cpa.g.sc8.113 Carica papaya HOM05D018895 ORTHO05D010851 1.7e-28 129.0 86 72.1
Cpa.g.sc8.114 Carica papaya HOM05D018895 ORTHO05D010851 1.1e-27 126.3 77 76.6
Cpa.g.sc111.59 Carica papaya HOM05D018895 ORTHO05D010851 2.8e-23 111.7 86 61.6
COL.COLO4_16121 Corchorus olitorius HOM05D009215 ORTHO05D010851 6.6e-12 73.9 66 53.0
QL09p049447 Quercus lobata HOM05D009215 ORTHO05D010851 9.5e-11 70.1 72 50.0
Duzib138G0384 Durio zibethinus HOM05D009215 ORTHO05D010851 8.0e-10 67.0 76 47.4
Gohir.A03G013100 Gossypium hirsutum HOM05D009215 ORTHO05D010851 8.0e-10 67.0 68 50.0
Eucgr.L02597 Eucalyptus grandis HOM05D009215 ORTHO05D010511 1.8e-09 65.9 66 51.5
QL09p049422 Quercus lobata HOM05D009215 ORTHO05D010851 1.8e-09 65.9 72 47.2
QL09p049436 Quercus lobata HOM05D009215 ORTHO05D010851 1.8e-09 65.9 72 47.2
Gorai.003G164100 Gossypium raimondii HOM05D009215 ORTHO05D010851 3.0e-09 65.1 68 48.5
Gohir.D03G156400 Gossypium hirsutum HOM05D009215 ORTHO05D010851 4.0e-09 64.7 73 43.8
Eucgr.E01762 Eucalyptus grandis HOM05D009215 ORTHO05D010511 8.9e-09 63.5 66 50.0
Gohir.A12G235600 Gossypium hirsutum HOM05D009215 ORTHO05D010851 1.2e-08 63.2 71 47.9
A07p07140 Brassica napus HOM05D008462 ORTHO05D010511 2.0e-08 62.4 73 43.8
BraA07t28500Z Brassica rapa HOM05D008462 ORTHO05D010511 2.0e-08 62.4 73 43.8
Carub.0003s2550 Capsella rubella HOM05D008462 ORTHO05D010511 2.0e-08 62.4 69 44.9
Eucgr.E01763 Eucalyptus grandis HOM05D008462 ORTHO05D010511 2.6e-08 62.0 66 47.0
Eucgr.L02598 Eucalyptus grandis HOM05D009215 ORTHO05D010511 5.7e-08 60.8 66 47.0
BcaC06g35797 Brassica carinata HOM05D008462 ORTHO05D010511 1.3e-07 59.7 70 44.3
C07p10750 Brassica napus HOM05D008462 ORTHO05D010511 1.3e-07 59.7 70 44.3
BolC7t41541H Brassica oleracea HOM05D008462 ORTHO05D010511 1.3e-07 59.7 70 44.3
Gorai.005G192700 Gossypium raimondii HOM05D009215 ORTHO05D010851 1.3e-07 59.7 68 45.6
QL09p049452 Quercus lobata HOM05D009215 ORTHO05D010851 1.3e-07 59.7 72 45.8
Manes.12G028500 Manihot esculenta HOM05D009215 ORTHO05D010851 1.7e-07 59.3 64 42.2
FAN15G1426 Fragaria x ananassa HOM05D009215 ORTHO05D010851 3.7e-07 58.2 77 45.5
Gohir.A03G148200 Gossypium hirsutum HOM05D009215 ORTHO05D010851 3.7e-07 58.2 62 41.9
CiPaw.14G040500 Carya illinoinensis HOM05D009215 ORTHO05D010851 4.9e-07 57.8 72 41.7
FAN27G1007 Fragaria x ananassa HOM05D009215 ORTHO05D010851 1.1e-06 56.6 77 42.9
Prupe.8G194500 Prunus persica HOM05D009215 ORTHO05D010851 1.4e-06 56.2 72 44.4
Prupe.8G194800 Prunus persica HOM05D009215 ORTHO05D010851 1.4e-06 56.2 72 44.4
Cfa010399 Carpinus fangiana HOM05D016133 ORTHO05D010851 3.1e-06 55.1 56 50.0
Eucgr.L02596 Eucalyptus grandis HOM05D008462 ORTHO05D010511 5.4e-06 54.3 64 45.3
FvH4_5g26840 Fragaria vesca HOM05D009215 ORTHO05D010851 9.2e-06 53.5 74 43.2


User provided reference genes

Program Settings