Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc79.65 Carica papaya HOM05D002129 ORTHO05D002188 7.2e-196 688.3 849 100.0
Duzib205G0555 Durio zibethinus HOM05D002129 ORTHO05D002188 3.6e-54 217.6 219 61.6
Duzib068G1418 Durio zibethinus HOM05D002129 ORTHO05D002188 1.1e-50 206.1 220 60.5
Manes.01G045900 Manihot esculenta HOM05D002129 ORTHO05D002188 1.2e-46 192.6 219 57.5
Gorai.003G081700 Gossypium raimondii HOM05D002129 ORTHO05D002188 9.9e-44 183.0 215 56.3
Thecc.03G293200 Theobroma cacao HOM05D002129 ORTHO05D002188 6.4e-43 180.3 194 61.3
Gohir.A02G102200 Gossypium hirsutum HOM05D002129 ORTHO05D002188 8.4e-43 179.9 215 54.9
Potri.001G094200 Populus trichocarpa HOM05D002129 ORTHO05D002188 8.4e-43 179.9 206 56.8
Manes.10G064266 Manihot esculenta HOM05D002129 ORTHO05D002188 1.4e-42 179.1 220 54.5
COL.COLO4_21718 Corchorus olitorius HOM05D002129 ORTHO05D002188 7.1e-42 176.8 198 58.6
arahy.Tifrunner.gnm1.ann1.DN0YA4 Arachis hypogaea HOM05D002129 ORTHO05D002188 6.0e-41 173.7 219 52.1
arahy.Tifrunner.gnm1.ann1.Q3GPI2 Arachis hypogaea HOM05D002129 ORTHO05D002188 7.8e-41 173.3 219 52.1
Gohir.D03G081900 Gossypium hirsutum HOM05D002129 ORTHO05D002188 1.3e-40 172.6 186 59.7
Gohir.A09G190800 Gossypium hirsutum HOM05D002129 ORTHO05D002188 2.4e-37 161.8 183 59.0
Ca_17495_v3 Cicer arietinum L. HOM05D002129 ORTHO05D002188 6.9e-37 160.2 219 47.0
Ciclev10018618m.g Citrus clementina HOM05D002129 ORTHO05D002188 6.9e-37 160.2 223 48.4
Gohir.D09G185400 Gossypium hirsutum HOM05D002129 ORTHO05D002188 7.6e-36 156.8 186 57.0
Duzib084G0477 Durio zibethinus HOM05D002129 ORTHO05D002188 9.9e-36 156.4 173 58.4
Potri.003G137400 Populus trichocarpa HOM05D002129 ORTHO05D002188 9.9e-36 156.4 192 54.7
Gorai.006G207900 Gossypium raimondii HOM05D002129 ORTHO05D002188 2.2e-35 155.2 183 57.9
Actinidia27335 Actinidia chinensis HOM05D002129 ORTHO05D002188 3.2e-34 151.4 220 49.1
Manes.02G012600 Manihot esculenta HOM05D002129 ORTHO05D002188 3.2e-34 151.4 160 60.0
TAR374G0929 Trochodendron aralioides HOM05D002129 ORTHO05D002188 7.1e-34 150.2 219 50.7
Sabra01G0070100 Salix brachista HOM05D002129 ORTHO05D002188 9.3e-34 149.8 206 51.0
Eucgr.E00844 Eucalyptus grandis HOM05D002129 ORTHO05D002188 2.1e-33 148.7 218 49.1
MD14G1121500 Malus domestica HOM05D002129 ORTHO05D002188 2.1e-33 148.7 188 54.8
RcHm_v2.0_Chr7g0195431 Rosa chinensis HOM05D002129 ORTHO05D002188 2.1e-33 148.7 170 60.6
Sabra03G0098900 Salix brachista HOM05D002129 ORTHO05D002188 2.7e-33 148.3 213 47.4
Cfa012842 Carpinus fangiana HOM05D002129 ORTHO05D002188 7.9e-33 146.7 155 58.7
Solyc08g082010.3 Solanum lycopersicum HOM05D002129 ORTHO05D002188 1.3e-32 146.0 218 47.2
Medtr8g099275 Medicago truncatula HOM05D002129 ORTHO05D002188 2.3e-32 145.2 219 45.2
TWI60G1278 Tripterygium wilfordii HOM05D002129 ORTHO05D002188 2.3e-32 145.2 195 49.7
Haze_08667 Corylus avellana HOM05D002129 ORTHO05D002188 1.1e-31 142.9 153 58.2
Sp7g00300 Schrenkiella parvula HOM05D002129 ORTHO05D002188 1.9e-31 142.1 217 46.5
Phvul.002G296300 Phaseolus vulgaris HOM05D002129 ORTHO05D002188 7.3e-31 140.2 197 48.7
Dinv37550 Davidia involucrata HOM05D002129 ORTHO05D002188 4.8e-30 137.5 160 58.8
Cc08_g15780 Coffea canephora HOM05D002129 ORTHO05D002188 1.1e-29 136.3 183 52.5
Nitab4.5_0000223g0210 Nicotiana tabacum HOM05D002129 ORTHO05D002188 1.1e-29 136.3 213 44.6
FAN08G2643 Fragaria x ananassa HOM05D002129 ORTHO05D002188 1.4e-29 136.0 173 56.6
QL02p031434 Quercus lobata HOM05D002129 ORTHO05D002188 4.0e-29 134.4 147 59.2
CiPaw.12G085000 Carya illinoinensis HOM05D002129 ORTHO05D002188 6.9e-29 133.7 139 60.4
Rhsim07G0084000 Rhododendron simsii HOM05D002129 ORTHO05D002188 6.9e-29 133.7 148 54.1
AL7G47470 Arabidopsis lyrata HOM05D002129 ORTHO05D002188 1.5e-28 132.5 218 45.0
CiPaw.11G123900 Carya illinoinensis HOM05D002129 ORTHO05D002188 2.6e-28 131.7 146 52.7
Glyma.08G021400 Glycine max HOM05D002129 ORTHO05D002188 2.6e-28 131.7 179 51.4
VMungo0251G1428 Vigna mungo HOM05D002129 ORTHO05D002188 5.8e-28 130.6 219 43.4
Glyma.05G215100 Glycine max HOM05D002129 ORTHO05D002188 9.9e-28 129.8 219 44.7
Carub.0007s3359 Capsella rubella HOM05D002129 ORTHO05D002188 1.3e-27 129.4 218 45.0
FAN13G0971 Fragaria x ananassa HOM05D002129 ORTHO05D002188 1.3e-27 129.4 173 54.3
MD06G1102300 Malus domestica HOM05D002129 ORTHO05D002188 1.3e-27 129.4 172 53.5
FAN18G4528 Fragaria x ananassa HOM05D002129 ORTHO05D002188 2.9e-27 128.3 173 54.3
CSS0045654 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 4.9e-27 127.5 140 52.1
FAN04G1700 Fragaria x ananassa HOM05D002129 ORTHO05D002188 6.4e-27 127.1 219 46.6
FAN04G3154 Fragaria x ananassa HOM05D002129 ORTHO05D002188 6.4e-27 127.1 219 46.6
Sopen08g030310 Solanum pennellii HOM05D002129 ORTHO05D002188 6.4e-27 127.1 191 48.2
TPR.G3412 Trifolium pratense HOM05D002129 ORTHO05D002188 1.1e-26 126.3 177 50.3
AT5G41790 Arabidopsis thaliana HOM05D002129 ORTHO05D002188 1.4e-26 125.9 218 44.5
FvH4_5g04072 Fragaria vesca HOM05D002129 ORTHO05D002188 1.4e-26 125.9 173 53.8
FAN18G3989 Fragaria x ananassa HOM05D002129 ORTHO05D002188 1.4e-26 125.9 173 53.8
Lj4g0008940 Lotus japonicus HOM05D002129 ORTHO05D002188 1.9e-26 125.6 176 49.4
BcaB06g27672 Brassica carinata HOM05D002129 ORTHO05D002188 4.2e-26 124.4 217 44.7
Nitab4.5_0004161g0030 Nicotiana tabacum HOM05D002129 ORTHO05D002188 4.2e-26 124.4 182 47.8
vmacro13912 Vaccinium macrocarpon HOM05D002129 ORTHO05D002188 7.1e-26 123.6 148 49.3
SGA_v2.0_scaffold111G31429 Striga asiatica HOM05D002129 ORTHO05D002188 1.2e-25 122.9 215 44.7
Lalb_Chr16g0390551 Lupinus albus HOM05D002129 ORTHO05D002188 2.1e-25 122.1 198 39.9
Oeu009945.1 Olea europaea HOM05D002129 ORTHO05D002188 2.7e-25 121.7 202 45.0
BraA04t17139Z Brassica rapa HOM05D002129 ORTHO05D002188 3.5e-25 121.3 219 42.5
BcaC02g08917 Brassica carinata HOM05D002129 ORTHO05D002188 4.6e-25 120.9 216 41.2
C04p49150 Brassica napus HOM05D002129 ORTHO05D002188 4.6e-25 120.9 216 41.2
BolC4t26499H Brassica oleracea HOM05D002129 ORTHO05D002188 1.0e-24 119.8 215 41.4
Aa31LG9G340 Aethionema arabicum HOM05D002129 ORTHO05D002188 3.9e-24 117.9 218 42.2
MSTRG.25657 Avicennia marina HOM05D002129 ORTHO05D002188 5.1e-24 117.5 218 46.8
A04p14960 Brassica napus HOM05D002129 ORTHO05D002188 5.1e-24 117.5 218 42.2
Atru.chr9.2042 Acer truncatum HOM05D002129 ORTHO05D002188 1.5e-23 115.9 159 50.9
Carub.0007s3367 Capsella rubella HOM05D002129 ORTHO05D021914 2.5e-23 115.2 218 44.0
AL2G10610 Arabidopsis lyrata HOM05D002129 ORTHO05D002188 4.3e-23 114.4 202 44.6
Thhalv10023387m.g Eutrema salsugineum HOM05D002129 ORTHO05D002188 4.3e-23 114.4 197 45.2
Lalb_Chr05g0224241 Lupinus albus HOM05D002129 ORTHO05D002188 7.4e-23 113.6 171 42.1
CANSAT21G2383 Cannabis sativa HOM05D002129 ORTHO05D002188 1.3e-22 112.8 149 55.7
Lsat_1_v5_gn_6_12040 Lactuca sativa HOM05D002129 ORTHO05D002188 2.8e-22 111.7 196 45.4
CARHR212780 Cardamine hirsuta HOM05D002129 ORTHO05D002188 4.8e-22 110.9 183 45.9
DCAR_005027 Daucus carota HOM05D002129 ORTHO05D002188 2.4e-21 108.6 218 37.2
Psat7g027680 Pisum sativum HOM05D002129 ORTHO05D002188 3.1e-21 108.2 177 48.0
Sp2g00430 Schrenkiella parvula HOM05D002129 ORTHO05D002188 3.1e-21 108.2 184 46.2
Dinv38857 Davidia involucrata HOM05D002129 ORTHO05D002188 5.3e-21 107.5 219 36.1
THA.LOC104809341 Tarenaya hassleriana HOM05D002129 ORTHO05D002188 9.0e-21 106.7 156 51.3
CAN.G532.94 Capsicum annuum HOM05D002129 ORTHO05D002188 1.2e-20 106.3 155 49.0
Aqoxy5G04152 Aquilegia oxysepala HOM05D002129 ORTHO05D002188 5.8e-20 104.0 219 40.2
Oeu042387.1 Olea europaea HOM05D002129 ORTHO05D002188 1.0e-19 103.2 168 48.2
Peaxi162Scf00074g01134 Petunia axillaris HOM05D002129 ORTHO05D002188 1.0e-19 103.2 218 38.1
Dinv37551 Davidia involucrata HOM05D002129 ORTHO05D002188 3.8e-19 101.3 174 38.5
PGR042G1587 Punica granatum HOM05D002129 ORTHO05D002188 3.8e-19 101.3 220 37.3
Sed0022097 Sechium edule HOM05D002129 ORTHO05D002188 3.8e-19 101.3 217 43.8
BolC6t37203H Brassica oleracea HOM05D002129 ORTHO05D002188 4.9e-19 100.9 138 45.7
ClCG07G014890 Citrullus lanatus HOM05D002129 ORTHO05D002188 4.9e-19 100.9 197 46.7
C06p20190 Brassica napus HOM05D001971 ORTHO05D002188 6.5e-19 100.5 133 48.1
C09p17910 Brassica napus HOM05D002129 ORTHO05D002188 1.1e-18 99.8 214 41.6
BolC9t54688H Brassica oleracea HOM05D002129 ORTHO05D002188 1.1e-18 99.8 214 41.6
PGSC0003DMG400012303 Solanum tuberosum HOM05D002129 ORTHO05D002188 1.4e-18 99.4 150 46.0
Sabra11G0006900 Salix brachista HOM05D002129 ORTHO05D014659 2.5e-18 98.6 97 54.6
EL10Ac5g12884 Beta vulgaris HOM05D002129 ORTHO05D002188 3.2e-18 98.2 173 49.1
BcaC04g22559 Brassica carinata HOM05D002129 ORTHO05D002188 5.5e-18 97.4 225 40.0
Lalb_Chr09g0332631 Lupinus albus HOM05D002129 ORTHO05D002188 5.5e-18 97.4 183 43.2
arahy.Tifrunner.gnm1.ann1.F3VNHJ Arachis hypogaea HOM05D002129 ORTHO05D002188 7.1e-18 97.1 116 48.3
arahy.Tifrunner.gnm1.ann1.P7UIV5 Arachis hypogaea HOM05D002129 ORTHO05D002188 7.1e-18 97.1 116 49.1
A09p14790 Brassica napus HOM05D002129 ORTHO05D002188 7.1e-18 97.1 214 42.1
BcaB07g31455 Brassica carinata HOM05D002129 ORTHO05D002188 1.2e-17 96.3 218 39.9
Carub.0002s0048 Capsella rubella HOM05D002129 ORTHO05D002188 1.2e-17 96.3 160 45.0
ECA233G6022 Erigeron canadensis HOM05D002129 ORTHO05D002188 2.1e-17 95.5 197 42.1
Sabra17G0008900 Salix brachista HOM05D013434 ORTHO05D014659 4.6e-17 94.4 149 40.3
SGA_v2.0_scaffold144G35850 Striga asiatica HOM05D002129 ORTHO05D002188 4.6e-17 94.4 189 43.4
Migut.E01236 Erythranthe guttata HOM05D002129 ORTHO05D002188 1.3e-16 92.8 156 50.0
SalBow8G2059 Salvia bowleyana HOM05D002129 ORTHO05D002188 1.3e-16 92.8 182 46.7
GSVIVG01019499001 Vitis vinifera HOM05D002129 ORTHO05D002188 1.8e-16 92.4 219 33.3
AUR62019808 Chenopodium quinoa HOM05D002129 ORTHO05D002188 2.3e-16 92.0 147 42.2
Prupe.5G115200 Prunus persica HOM05D002129 ORTHO05D002188 2.3e-16 92.0 207 33.8
CSS0027740 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 3.0e-16 91.7 212 34.9
ECA240G2507 Erigeron canadensis HOM05D002129 ORTHO05D002188 3.9e-16 91.3 191 40.3
AUR62010809 Chenopodium quinoa HOM05D002129 ORTHO05D002188 8.7e-16 90.1 146 40.4
Actinidia01396 Actinidia chinensis HOM05D002129 ORTHO05D002188 1.5e-15 89.4 175 37.1
Lsat_1_v5_gn_6_85821 Lactuca sativa HOM05D002129 ORTHO05D002188 3.3e-15 88.2 182 41.8
CSS0018198 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 4.3e-15 87.8 212 34.0
MELO3C016308.2 Cucumis melo HOM05D002129 ORTHO05D002188 5.7e-15 87.4 191 42.4
CsaV3_4G006420 Cucumis sativus L. HOM05D002129 ORTHO05D002188 9.6e-15 86.7 191 42.4
QL02p031447 Quercus lobata HOM05D002129 ORTHO05D002188 1.6e-14 85.9 163 37.4
Ah.12g052310 Amaranthus hybridus HOM05D002129 ORTHO05D002188 2.1e-14 85.5 246 38.6
AT1G64330 Arabidopsis thaliana HOM05D002129 ORTHO05D002188 6.3e-14 84.0 158 39.2
HanXRQChr03g0085141 Helianthus annuus HOM05D002129 ORTHO05D002188 1.8e-13 82.4 212 38.2
Rhsim02G0241100 Rhododendron simsii HOM05D002129 ORTHO05D002188 4.1e-13 81.3 140 37.1
Migut.A00678 Erythranthe guttata HOM05D002129 ORTHO05D002188 9.0e-13 80.1 174 42.0
vmacro11445 Vaccinium macrocarpon HOM05D001971 ORTHO05D003057 2.6e-12 78.6 140 37.1
TAR374G0015 Trochodendron aralioides HOM05D002129 ORTHO05D002188 5.9e-12 77.4 74 54.1
Sc07g0009960 Simmondsia chinensis HOM05D002129 ORTHO05D002188 7.6e-12 77.0 212 32.5
unitig_62.g23616 Utricularia gibba HOM05D002129 ORTHO05D002188 7.6e-12 77.0 203 38.9
TWI15G0725 Tripterygium wilfordii HOM05D002129 ORTHO05D002188 1.3e-11 76.3 220 32.7
Aa31LG2G1320 Aethionema arabicum HOM05D005266 ORTHO05D006416 2.9e-11 75.1 222 34.7
Thecc.03G293100 Theobroma cacao HOM05D002129 ORTHO05D002188 2.9e-11 75.1 201 32.8
QL12p009828 Quercus lobata HOM05D002129 ORTHO05D002188 3.8e-11 74.7 223 30.5
QL12p010595 Quercus lobata HOM05D002129 ORTHO05D002188 3.8e-11 74.7 223 30.5
Gohir.A08G099784 Gossypium hirsutum HOM05D002129 ORTHO05D002188 5.0e-11 74.3 185 38.4
Thhalv10027620m.g Eutrema salsugineum HOM05D002129 ORTHO05D002188 6.5e-11 73.9 130 40.0
MD14G1121400 Malus domestica HOM05D002129 ORTHO05D002188 6.5e-11 73.9 193 35.2
unitig_52.g17439 Utricularia gibba HOM05D002129 ORTHO05D002188 2.5e-10 72.0 109 52.3
Hund11405 Selenicereus undatus HOM05D002129 ORTHO05D002188 3.2e-10 71.6 158 38.0
SalBow1G3214 Salvia bowleyana HOM05D002129 ORTHO05D002188 7.2e-10 70.5 212 33.0
Duzib068G0910 Durio zibethinus HOM05D002129 ORTHO05D002188 1.6e-09 69.3 199 31.2
Prupe.5G115300 Prunus persica HOM05D002129 ORTHO05D002188 1.6e-09 69.3 138 47.1
Gohir.D08G132401 Gossypium hirsutum HOM05D002129 ORTHO05D002188 2.1e-09 68.9 236 28.4
Gorai.004G135400 Gossypium raimondii HOM05D002129 ORTHO05D002188 2.1e-09 68.9 236 28.8
CSS0015477 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 4.6e-09 67.8 176 33.5
MD06G1102200 Malus domestica HOM05D002129 ORTHO05D002188 4.6e-09 67.8 193 34.2
CSS0047098 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 1.0e-08 66.6 176 33.5
CARHR046630 Cardamine hirsuta HOM05D002129 ORTHO05D002188 1.8e-08 65.9 224 32.6
Sc07g0009950 Simmondsia chinensis HOM05D002129 ORTHO05D002188 1.8e-08 65.9 166 33.1
Cpa.g.sc122.43 Carica papaya HOM05D002129 ORTHO05D002188 2.3e-08 65.5 147 35.4
Migut.N02095 Erythranthe guttata HOM05D002129 ORTHO05D002188 2.3e-08 65.5 198 30.8
MBI07_g09922_MAGBIO Magnolia biondii HOM05D002129 ORTHO05D002188 2.3e-08 65.5 244 33.2
Peaxi162Scf00117g00131 Petunia axillaris HOM05D002129 ORTHO05D002188 3.9e-08 64.7 99 40.4
Cc08_g15770 Coffea canephora HOM05D002129 ORTHO05D002188 1.5e-07 62.8 83 41.0
HanXRQChr02g0048241 Helianthus annuus HOM05D002129 ORTHO05D002188 1.5e-07 62.8 147 38.1
Medtr8g090070 Medicago truncatula HOM05D002129 ORTHO05D002188 2.5e-07 62.0 129 36.4
Nitab4.5_0005112g0010 Nicotiana tabacum HOM05D002129 ORTHO05D002188 2.5e-07 62.0 99 40.4
BcaB02g10228 Brassica carinata HOM05D002129 ORTHO05D016708 3.3e-07 61.6 99 41.4
Sabra03G0098800 Salix brachista HOM05D002129 ORTHO05D002188 4.3e-07 61.2 227 25.6
Ah.07g197190 Amaranthus hybridus HOM05D002129 ORTHO05D002188 5.7e-07 60.8 151 42.4
Oeu061086.1 Olea europaea HOM05D002129 ORTHO05D002188 2.2e-06 58.9 207 29.5
CANSAT21G0822 Cannabis sativa HOM05D002129 ORTHO05D002188 3.7e-06 58.2 228 27.6
COL.COLO4_21719 Corchorus olitorius HOM05D002129 ORTHO05D002188 8.2e-06 57.0 200 29.0


User provided reference genes

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