Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc79.41 Carica papaya HOM05D007666 ORTHO05D009567 3.3e-201 704.9 374 100.0
Thecc.03G296800 Theobroma cacao HOM05D007666 ORTHO05D009567 4.3e-84 315.8 454 44.5
Prupe.5G117900 Prunus persica HOM05D007666 ORTHO05D009567 3.6e-83 312.8 377 51.2
CSS0011760 Camellia sinensis var. sinensis HOM05D007666 ORTHO05D009567 9.0e-82 308.1 381 49.9
Dinv38838 Davidia involucrata HOM05D007666 ORTHO05D009567 7.6e-81 305.1 380 47.9
CiPaw.12G083800 Carya illinoinensis HOM05D007666 ORTHO05D009567 9.3e-79 298.1 384 49.0
Sabra03G0100600 Salix brachista HOM05D007666 ORTHO05D009567 1.2e-78 297.7 382 52.4
MD06G1105600 Malus domestica HOM05D007666 ORTHO05D009567 6.0e-78 295.4 381 49.6
Atru.chr9.2008 Acer truncatum HOM05D007666 ORTHO05D009567 1.8e-77 293.9 386 50.5
Ciclev10020669m.g Citrus clementina HOM05D007666 ORTHO05D009567 1.4e-74 284.3 381 49.1
Potri.001G092300 Populus trichocarpa HOM05D007666 ORTHO05D009567 1.4e-74 284.3 379 50.7
GSVIVG01019521001 Vitis vinifera HOM05D007666 ORTHO05D009567 2.4e-74 283.5 383 45.4
ClCG07G014990 Citrullus lanatus HOM05D007666 ORTHO05D009567 5.8e-73 278.9 372 48.4
Rhsim02G0242700 Rhododendron simsii HOM05D007666 ORTHO05D009567 2.2e-72 276.9 422 48.1
Potri.003G139400 Populus trichocarpa HOM05D007666 ORTHO05D009567 3.8e-72 276.2 379 49.3
Duzib068G1371 Durio zibethinus HOM05D007666 ORTHO05D009567 2.5e-71 273.5 500 39.2
Gorai.003G080900 Gossypium raimondii HOM05D007666 ORTHO05D009567 3.2e-71 273.1 260 57.7
Actinidia22150 Actinidia chinensis HOM05D007666 ORTHO05D009567 6.0e-70 268.9 248 62.5
Gohir.D03G082600 Gossypium hirsutum HOM05D007666 ORTHO05D009567 1.3e-69 267.7 260 56.9
RcHm_v2.0_Chr7g0195021 Rosa chinensis HOM05D007666 ORTHO05D009567 2.5e-68 263.5 383 46.5
MELO3C016286.2 Cucumis melo HOM05D007666 ORTHO05D009567 2.8e-67 260.0 371 44.5
FvH4_5g04480 Fragaria vesca HOM05D007666 ORTHO05D009567 4.8e-67 259.2 384 46.1
FAN13G3316 Fragaria x ananassa HOM05D007666 ORTHO05D009567 1.4e-66 257.7 384 46.1
FAN18G0717 Fragaria x ananassa HOM05D007666 ORTHO05D009567 1.8e-66 257.3 384 45.8
Hma1.2p1_0229F.1_g097150 Hydrangea macrophylla HOM05D007666 ORTHO05D009567 4.0e-66 256.1 380 45.3
FAN08G0521 Fragaria x ananassa HOM05D007666 ORTHO05D009567 1.2e-65 254.6 383 46.0
FAN18G2245 Fragaria x ananassa HOM05D007666 ORTHO05D009567 1.5e-65 254.2 384 45.8
QL02p030815 Quercus lobata HOM05D007666 ORTHO05D009567 4.9e-64 249.2 402 43.0
Manes.01G049375 Manihot esculenta HOM05D007666 ORTHO05D009567 1.4e-63 247.7 294 50.0
CsaV3_4G006520 Cucumis sativus L. HOM05D007666 ORTHO05D009567 1.9e-63 247.3 371 44.5
Gohir.A02G101700 Gossypium hirsutum HOM05D007666 ORTHO05D009567 7.1e-63 245.4 265 53.6
Sed0008321 Sechium edule HOM05D007666 ORTHO05D009567 9.3e-63 245.0 380 44.5
Sed0007649 Sechium edule HOM05D007666 ORTHO05D009567 1.6e-62 244.2 224 59.4
TWI60G1340 Tripterygium wilfordii HOM05D007666 ORTHO05D009567 6.0e-62 242.3 377 45.6
Aqoxy5G04207 Aquilegia oxysepala HOM05D007666 ORTHO05D009567 6.7e-61 238.8 370 43.5
CiPaw.11G122000 Carya illinoinensis HOM05D007666 ORTHO05D009567 6.7e-61 238.8 374 44.9
EL10Ac5g12908 Beta vulgaris HOM05D007666 ORTHO05D009567 1.8e-58 230.7 375 42.1
Gorai.006G207700 Gossypium raimondii HOM05D007666 ORTHO05D009567 1.3e-56 224.6 504 33.1
PSO384G2287 Papaver somniferum HOM05D007666 ORTHO05D009567 3.8e-56 223.0 360 40.0
Gohir.A09G190500 Gossypium hirsutum HOM05D007666 ORTHO05D009567 1.9e-55 220.7 260 47.3
THA.LOC104817649 Tarenaya hassleriana HOM05D007666 ORTHO05D009567 1.9e-55 220.7 401 45.1
PSO135G0060 Papaver somniferum HOM05D007666 ORTHO05D009567 4.2e-55 219.5 385 39.5
TAR636G3598 Trochodendron aralioides HOM05D007666 ORTHO05D009567 4.2e-55 219.5 380 41.6
Gohir.D09G185200 Gossypium hirsutum HOM05D007666 ORTHO05D009567 7.2e-55 218.8 504 32.9
AUR62010832 Chenopodium quinoa HOM05D007666 ORTHO05D009567 3.9e-53 213.0 372 39.2
Lj2C168T16 Lonicera japonica HOM05D007666 ORTHO05D009567 6.7e-53 212.2 227 54.2
COL.COLO4_10690 Corchorus olitorius HOM05D007666 ORTHO05D009567 3.3e-52 209.9 292 48.3
vmacro11431 Vaccinium macrocarpon HOM05D007666 ORTHO05D009567 3.3e-52 209.9 521 34.5
Nitab4.5_0001231g0060 Nicotiana tabacum HOM05D007666 ORTHO05D009567 1.7e-51 207.6 232 51.7
HanXRQChr06g0166511 Helianthus annuus HOM05D007666 ORTHO05D009567 8.2e-51 205.3 384 37.5
DCAR_005041 Daucus carota HOM05D007666 ORTHO05D009567 1.4e-50 204.5 202 53.5
Peaxi162Scf00074g00106 Petunia axillaris HOM05D007666 ORTHO05D009567 1.8e-50 204.1 232 49.6
Ah.07g197340 Amaranthus hybridus HOM05D007666 ORTHO05D009567 4.1e-50 203.0 388 37.9
Hund14226 Selenicereus undatus HOM05D007666 ORTHO05D009567 1.2e-49 201.4 431 35.7
Carub.0002s0039 Capsella rubella HOM05D007666 ORTHO05D009567 2.0e-49 200.7 388 40.5
CARHR046550 Cardamine hirsuta HOM05D007666 ORTHO05D009567 2.0e-49 200.7 387 41.9
Nitab4.5_0005537g0030 Nicotiana tabacum HOM05D007666 ORTHO05D009567 2.0e-49 200.7 277 46.2
AL2G10470 Arabidopsis lyrata HOM05D007666 ORTHO05D009567 1.3e-48 198.0 389 39.8
SpUn0393_0010 Schrenkiella parvula HOM05D007666 ORTHO05D009567 2.9e-48 196.8 387 41.1
MSTRG.25667 Avicennia marina HOM05D007666 ORTHO05D009567 3.8e-48 196.4 273 44.3
MBI07_g38452_MAGBIO Magnolia biondii HOM05D007666 ORTHO05D009567 3.8e-48 196.4 378 40.2
PGSC0003DMG400012289 Solanum tuberosum HOM05D007666 ORTHO05D009567 1.4e-47 194.5 409 37.2
Sopen08g030510 Solanum pennellii HOM05D007666 ORTHO05D009567 3.2e-47 193.4 404 36.6
Dinv37538 Davidia involucrata HOM05D007666 ORTHO05D009567 9.4e-47 191.8 259 46.3
Thhalv10023582m.g Eutrema salsugineum HOM05D007666 ORTHO05D009567 2.7e-46 190.3 290 43.8
Cc08_g15990 Coffea canephora HOM05D007666 ORTHO05D009567 3.6e-46 189.9 254 46.1
AT1G64385 Arabidopsis thaliana HOM05D007666 ORTHO05D009567 2.3e-45 187.2 391 39.9
SGA_v2.0_scaffold305G47963 Striga asiatica HOM05D007666 ORTHO05D009567 4.8e-43 179.5 322 40.4
BcaB07g31505 Brassica carinata HOM05D007666 ORTHO05D009567 1.4e-42 177.9 328 43.3
Duzib205G0056 Durio zibethinus HOM05D007666 ORTHO05D009567 1.4e-42 177.9 235 47.7
Migut.A00661 Erythranthe guttata HOM05D007666 ORTHO05D009567 1.4e-42 177.9 318 42.1
A09p14330 Brassica napus HOM05D007666 ORTHO05D009567 3.1e-42 176.8 331 41.4
ECA246G0366 Erigeron canadensis HOM05D007666 ORTHO05D009567 5.3e-42 176.0 379 36.1
BraA09t37080Z Brassica rapa HOM05D007666 ORTHO05D009567 1.2e-41 174.9 335 40.9
Lsat_1_v5_gn_3_10540 Lactuca sativa HOM05D007666 ORTHO05D009567 3.8e-40 169.9 404 37.1
C09p17230 Brassica napus HOM05D007666 ORTHO05D009567 6.5e-40 169.1 322 41.6
BolC9t54623H Brassica oleracea HOM05D007666 ORTHO05D009567 6.5e-40 169.1 322 41.6
Actinidia04207 Actinidia chinensis HOM05D007666 ORTHO05D009567 7.2e-39 165.6 242 47.5
BcaC04g22624 Brassica carinata HOM05D007666 ORTHO05D009567 1.2e-38 164.9 322 40.4
SalBow1G7426 Salvia bowleyana HOM05D007666 ORTHO05D009567 8.0e-38 162.2 340 37.9
Atru.chr2.3612 Acer truncatum HOM05D007666 ORTHO05D009567 1.0e-37 161.8 159 57.2
Aa31LG2G1390 Aethionema arabicum HOM05D007666 ORTHO05D009567 2.6e-36 157.1 212 51.4
AUR62019830 Chenopodium quinoa HOM05D007666 ORTHO05D009567 3.3e-36 156.8 370 35.4
MD14G1127900 Malus domestica HOM05D007666 ORTHO05D009567 1.3e-35 154.8 183 50.3
ATR0188G013 Amborella trichopoda HOM05D007666 ORTHO05D009567 8.2e-35 152.1 416 35.6
HPP92_005518 Vanilla planifolia HOM05D007666 ORTHO05D009567 3.1e-34 150.2 327 33.6
Nn3g19029 Nelumbo nucifera HOM05D007666 ORTHO05D009567 2.2e-32 144.1 156 51.3
FAN04G1782 Fragaria x ananassa HOM05D007666 ORTHO05D009567 2.8e-27 127.1 228 42.5
Zm00001eb344230 Zea mays HOM05D007666 ORTHO05D009567 2.2e-24 117.5 294 33.7
Dinv16976 Davidia involucrata HOM05D003589 ORTHO05D005170 1.3e-16 91.7 244 32.0
Aqoxy4G02429 Aquilegia oxysepala HOM05D003589 ORTHO05D005170 2.3e-16 90.9 299 31.8
SEGI_11810 Sequoiadendron giganteum HOM05D003589 ORTHO05D005170 2.8e-14 84.0 198 33.3
Hund03699 Selenicereus undatus HOM05D003589 ORTHO05D005170 1.8e-13 81.3 250 31.6
ATR1127G101 Amborella trichopoda HOM05D003589 ORTHO05D005170 2.3e-13 80.9 255 29.0
TAR633G1241 Trochodendron aralioides HOM05D003589 ORTHO05D005170 4.0e-13 80.1 296 30.1
COL.COLO4_10689 Corchorus olitorius HOM05D007666 ORTHO05D009567 5.2e-13 79.7 173 36.4
PSO170G6362 Papaver somniferum HOM05D003589 ORTHO05D005170 6.8e-13 79.3 224 30.4
Sc20g0006980 Simmondsia chinensis HOM05D003589 ORTHO05D005170 1.5e-12 78.2 223 31.4
Manes.09G118000 Manihot esculenta HOM05D003589 ORTHO05D005170 4.4e-12 76.6 250 29.2
RcHm_v2.0_Chr3g0460451 Rosa chinensis HOM05D003589 ORTHO05D005170 4.4e-12 76.6 250 31.6
Potri.006G108400 Populus trichocarpa HOM05D003589 ORTHO05D005170 1.7e-11 74.7 250 30.4
Solyc08g082240.1 Solanum lycopersicum HOM05D007666 ORTHO05D009567 2.8e-11 73.9 92 50.0
Ciclev10011425m.g Citrus clementina HOM05D003589 ORTHO05D005170 3.7e-11 73.6 232 28.4
EL10Ac7g17103 Beta vulgaris HOM05D003589 ORTHO05D005170 4.9e-11 73.2 225 29.8
Atru.chr8.113 Acer truncatum HOM05D003589 ORTHO05D005170 1.8e-10 71.2 214 29.4
Duzib151G0965 Durio zibethinus HOM05D003589 ORTHO05D005170 2.4e-10 70.9 226 29.2
MD04G1174800 Malus domestica HOM05D003589 ORTHO05D005170 5.4e-10 69.7 217 30.9
PGR031G3776 Punica granatum HOM05D003589 ORTHO05D005170 5.4e-10 69.7 227 27.3
Psat3g118720 Pisum sativum HOM05D003589 ORTHO05D005170 3.5e-09 67.0 269 27.5
PGSC0003DMG400026790 Solanum tuberosum HOM05D003589 ORTHO05D005170 1.7e-08 64.7 257 27.2
Prupe.6G293800 Prunus persica HOM05D003589 ORTHO05D005170 2.9e-08 63.9 232 29.3
Pp3c1_25250 Physcomitrium patens HOM05D029953 ORTHO05D005170 3.9e-08 63.5 241 27.4
SMO239G0125 Selaginella moellendorffii HOM05D007666 ORTHO05D009567 3.9e-08 63.5 238 31.5
Solyc09g015530.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 1.1e-07 62.0 261 26.4
SGA_v2.0_scaffold85G26610 Striga asiatica HOM05D003589 ORTHO05D005170 2.5e-07 60.8 214 23.4
Gohir.D02G003600 Gossypium hirsutum HOM05D003589 ORTHO05D005170 4.3e-07 60.1 254 25.6
CsaV3_6G002320 Cucumis sativus L. HOM05D003589 ORTHO05D005170 7.3e-07 59.3 190 26.3
Gohir.A10G150900 Gossypium hirsutum HOM05D003589 ORTHO05D005170 7.3e-07 59.3 306 26.5
AagrBONN_evm.TU.Sc2ySwM_368.250 Anthoceros agrestis HOM05D029953 ORTHO05D009567 9.5e-07 58.9 250 23.6


User provided reference genes

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