Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc79.27 Carica papaya HOM05D007126 ORTHO05D008974 6.7e-64 247.3 134 100.0
Dinv38826 Davidia involucrata HOM05D007126 ORTHO05D008974 1.7e-27 126.3 113 65.5
Thecc.03G299000 Theobroma cacao HOM05D007126 ORTHO05D008974 3.6e-25 118.6 71 90.1
QL02p030251 Quercus lobata HOM05D007126 ORTHO05D008974 4.7e-25 118.2 76 85.5
CANSAT21G1075 Cannabis sativa HOM05D007126 ORTHO05D008974 6.2e-25 117.9 71 90.1
Potri.001G090800 Populus trichocarpa HOM05D007126 ORTHO05D008974 6.2e-25 117.9 71 90.1
Gohir.A12G236900 Gossypium hirsutum HOM05D007126 ORTHO05D008974 1.1e-24 117.1 71 88.7
Gorai.008G255000 Gossypium raimondii HOM05D007126 ORTHO05D008974 1.1e-24 117.1 71 88.7
MD06G1108400 Malus domestica HOM05D007126 ORTHO05D008974 1.4e-24 116.7 71 90.1
Prupe.5G121000 Prunus persica HOM05D007126 ORTHO05D008974 1.4e-24 116.7 71 90.1
Sabra01G0067000 Salix brachista HOM05D007126 ORTHO05D008974 1.4e-24 116.7 71 88.7
Aa31LG2G1430 Aethionema arabicum HOM05D007126 ORTHO05D008974 1.8e-24 116.3 70 88.6
CiPaw.11G120500 Carya illinoinensis HOM05D007126 ORTHO05D008974 1.8e-24 116.3 71 88.7
TWI15G1063 Tripterygium wilfordii HOM05D007126 ORTHO05D008974 1.8e-24 116.3 71 88.7
Haze_09075 Corylus avellana HOM05D007126 ORTHO05D008974 2.3e-24 115.9 71 88.7
CSS0001738 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 4.0e-24 115.2 71 88.7
Ciclev10019342m.g Citrus clementina HOM05D007126 ORTHO05D008974 4.0e-24 115.2 74 81.1
PGR031G2002 Punica granatum HOM05D007126 ORTHO05D008974 4.0e-24 115.2 71 87.3
GSVIVG01019542001 Vitis vinifera HOM05D007126 ORTHO05D008974 5.2e-24 114.8 71 88.7
Atru.chr9.1971 Acer truncatum HOM05D007126 ORTHO05D008974 6.8e-24 114.4 71 87.3
Atru.chr9.1985 Acer truncatum HOM05D007126 ORTHO05D008974 6.8e-24 114.4 71 87.3
Gohir.D12G238100 Gossypium hirsutum HOM05D007126 ORTHO05D008974 6.8e-24 114.4 71 87.3
BcaB07g31464 Brassica carinata HOM05D007126 ORTHO05D008974 8.9e-24 114.0 70 87.1
BcaC04g22569 Brassica carinata HOM05D007126 ORTHO05D008974 8.9e-24 114.0 70 87.1
A09p14710 Brassica napus HOM05D007126 ORTHO05D008974 8.9e-24 114.0 70 87.1
BolC9t54678H Brassica oleracea HOM05D007126 ORTHO05D008974 8.9e-24 114.0 70 87.1
BraA09t37117Z Brassica rapa HOM05D007126 ORTHO05D008974 8.9e-24 114.0 70 87.1
CSS0007498 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 1.2e-23 113.6 71 87.3
AUR62010848 Chenopodium quinoa HOM05D007126 ORTHO05D008974 1.2e-23 113.6 71 84.5
Lsat_1_v5_gn_3_10920 Lactuca sativa HOM05D007126 ORTHO05D008974 1.2e-23 113.6 71 87.3
RcHm_v2.0_Chr7g0194681 Rosa chinensis HOM05D007126 ORTHO05D008974 1.2e-23 113.6 71 87.3
AUR62019847 Chenopodium quinoa HOM05D007126 ORTHO05D008974 1.5e-23 113.2 71 83.1
Actinidia22167 Actinidia chinensis HOM05D007126 ORTHO05D008974 2.0e-23 112.8 71 87.3
CARHR046500 Cardamine hirsuta HOM05D007126 ORTHO05D008974 2.0e-23 112.8 70 85.7
Sp2g00310 Schrenkiella parvula HOM05D007126 ORTHO05D008974 2.6e-23 112.5 70 85.7
HanXRQChr17g0534861 Helianthus annuus HOM05D007126 ORTHO05D008974 3.4e-23 112.1 71 84.5
AT1G64430 Arabidopsis thaliana HOM05D007126 ORTHO05D008974 4.4e-23 111.7 70 84.3
Eucgr.D01749 Eucalyptus grandis HOM05D007126 ORTHO05D008974 4.4e-23 111.7 71 83.1
Thhalv10023389m.g Eutrema salsugineum HOM05D007126 ORTHO05D008974 4.4e-23 111.7 70 85.7
PGSC0003DMG400004995 Solanum tuberosum HOM05D007126 ORTHO05D008974 4.4e-23 111.7 71 85.9
Nn1g08439 Nelumbo nucifera HOM05D007126 ORTHO05D008974 5.8e-23 111.3 71 85.9
Duzib205G0473 Durio zibethinus HOM05D007126 ORTHO05D008974 7.5e-23 110.9 71 83.1
Hma1.2p1_0440F.1_g153370 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 7.5e-23 110.9 71 87.3
Hund11386 Selenicereus undatus HOM05D007126 ORTHO05D008974 7.5e-23 110.9 75 76.0
TAR374G0215 Trochodendron aralioides HOM05D007126 ORTHO05D008974 7.5e-23 110.9 71 87.3
Carub.0002s0034 Capsella rubella HOM05D007126 ORTHO05D008974 9.8e-23 110.5 70 82.9
Nitab4.5_0000726g0050 Nicotiana tabacum HOM05D007126 ORTHO05D008974 9.8e-23 110.5 71 85.9
Sopen12g024410 Solanum pennellii HOM05D007126 ORTHO05D008974 9.8e-23 110.5 71 85.9
Manes.01G047820 Manihot esculenta HOM05D007126 ORTHO05D008974 1.3e-22 110.2 71 83.1
Nitab4.5_0004010g0090 Nicotiana tabacum HOM05D007126 ORTHO05D008974 1.3e-22 110.2 71 85.9
PSO063G3961 Papaver somniferum HOM05D007126 ORTHO05D008974 1.3e-22 110.2 71 84.5
AL2G10420 Arabidopsis lyrata HOM05D007126 ORTHO05D008974 1.7e-22 109.8 70 84.3
THA.LOC104817626 Tarenaya hassleriana HOM05D007126 ORTHO05D008974 1.7e-22 109.8 70 82.9
Sc22g0004970 Simmondsia chinensis HOM05D007126 ORTHO05D008974 2.9e-22 109.0 71 83.1
Cc08_g16150 Coffea canephora HOM05D007126 ORTHO05D008974 3.7e-22 108.6 76 80.3
Oeu009966.1 Olea europaea HOM05D007126 ORTHO05D008974 3.7e-22 108.6 71 81.7
Migut.A00631 Erythranthe guttata HOM05D007126 ORTHO05D008974 4.9e-22 108.2 71 81.7
Aqoxy5G04057_Aqoxy5G04058 Aquilegia oxysepala HOM05D007126 ORTHO05D008974 6.4e-22 107.8 71 81.7
CAN.G390.5 Capsicum annuum HOM05D007126 ORTHO05D008974 1.1e-21 107.1 71 84.5
ECA246G3461 Erigeron canadensis HOM05D007126 ORTHO05D008974 1.1e-21 107.1 70 84.3
Potri.003G140800 Populus trichocarpa HOM05D007126 ORTHO05D008974 3.2e-21 105.5 71 83.1
Sed0013130 Sechium edule HOM05D007126 ORTHO05D008974 4.1e-21 105.1 71 77.5
EL10Ac5g12922 Beta vulgaris HOM05D007126 ORTHO05D008974 5.4e-21 104.8 74 79.7
Phvul.002G298304 Phaseolus vulgaris HOM05D007126 ORTHO05D008974 5.4e-21 104.8 70 78.6
CsaV3_4G006650 Cucumis sativus L. HOM05D007126 ORTHO05D008974 7.1e-21 104.4 71 77.5
arahy.Tifrunner.gnm1.ann1.GEY0M8 Arachis hypogaea HOM05D007126 ORTHO05D008974 9.2e-21 104.0 70 77.1
ATR0598G096 Amborella trichopoda HOM05D007126 ORTHO05D008974 2.1e-20 102.8 71 81.7
arahy.Tifrunner.gnm1.ann1.U3A0V6 Arachis hypogaea HOM05D007126 ORTHO05D008974 2.7e-20 102.4 70 77.1
VMungo0251G2926 Vigna mungo HOM05D007126 ORTHO05D008974 2.7e-20 102.4 70 77.1
HPP92_007857 Vanilla planifolia HOM05D007126 ORTHO05D008974 1.0e-19 100.5 70 75.7
CDE08G0877 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 2.3e-19 99.4 71 76.1
Glyma.08G023000 Glycine max HOM05D007126 ORTHO05D008974 2.3e-19 99.4 70 75.7
Lalb_Chr09g0332411 Lupinus albus HOM05D007126 ORTHO05D008974 6.6e-19 97.8 71 71.8
Solyc12g055940.3 Solanum lycopersicum HOM05D007126 ORTHO05D008974 8.6e-19 97.4 88 68.2
Lj4g0010714 Lotus japonicus HOM05D007126 ORTHO05D008974 1.9e-18 96.3 70 74.3
Medtr8g099525 Medicago truncatula HOM05D007126 ORTHO05D008974 9.5e-18 94.0 70 72.9
Zm00001eb028190 Zea mays HOM05D007126 ORTHO05D008974 2.1e-17 92.8 70 68.6
TPR.G3456 Trifolium pratense HOM05D007126 ORTHO05D008974 4.7e-17 91.7 71 70.4
Rhsim02G0244700 Rhododendron simsii HOM05D007126 ORTHO05D008974 3.1e-16 89.0 52 92.3
C09p17800 Brassica napus HOM05D007126 ORTHO05D008974 4.0e-16 88.6 74 68.9
FvH4_5g04720 Fragaria vesca HOM05D007126 ORTHO05D008974 1.5e-15 86.7 52 86.5
Lj2C166T10 Lonicera japonica HOM05D007126 ORTHO05D008974 2.0e-15 86.3 52 88.5
Hma1.2p1_0440F.1_g153360 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 3.4e-15 85.5 54 87.0
MBI06_g08479_MAGBIO Magnolia biondii HOM05D007126 ORTHO05D008974 4.4e-15 85.1 54 85.2
SEGI_34352 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 5.8e-15 84.7 72 62.5
ClCG07G011560 Citrullus lanatus HOM05D007126 ORTHO05D008974 2.2e-14 82.8 52 82.7
MELO3C016299.2 Cucumis melo HOM05D007126 ORTHO05D008974 2.2e-14 82.8 52 82.7
DCAR_029908 Daucus carota HOM05D007126 ORTHO05D008974 2.9e-14 82.4 53 81.1
Mapoly0029s0043 Marchantia polymorpha HOM05D007126 ORTHO05D008974 3.7e-14 82.0 72 59.7
CBR_g19104 Chara braunii HOM05D007126 ORTHO05D008974 6.4e-14 81.3 72 56.9
SalBow1G1535 Salvia bowleyana HOM05D007126 ORTHO05D008974 1.1e-13 80.5 54 77.8
SGA_v2.0_scaffold305G47987 Striga asiatica HOM05D007126 ORTHO05D008974 3.2e-13 79.0 54 75.9
SMO367G1126 Selaginella moellendorffii HOM05D007126 ORTHO05D008974 1.0e-11 73.9 76 52.6
unitig_37.g12131 Utricularia gibba HOM05D007126 ORTHO05D008974 3.1e-08 62.4 69 55.1
Pp3c15_17220 Physcomitrium patens HOM05D007126 ORTHO05D008974 5.2e-08 61.6 72 50.0
Cre14.g611950 Chlamydomonas reinhardtii HOM05D007126 ORTHO05D008974 2.6e-07 59.3 71 46.5
FAN13G2101 Fragaria x ananassa HOM05D007126 ORTHO05D008974 4.4e-07 58.5 39 82.1


User provided reference genes

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