Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc79.16 Carica papaya HOM05D000002 ORTHO05D000047 1.8e-31 139.0 92 100.0
Cpa.g.sc69.23 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-13 79.7 59 71.2
Cpa.g.sc168.5 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-12 76.3 60 70.0
Cpa.g.sc35.41 Carica papaya HOM05D003119 ORTHO05D003559 4.1e-12 74.7 48 68.8
Cpa.g.sc120.56 Carica papaya HOM05D000002 ORTHO05D000047 7.0e-12 73.9 92 45.7
Cpa.g.sc28.17 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-11 73.2 60 65.0
Cpa.g.sc30.156 Carica papaya HOM05D000002 ORTHO05D000047 2.7e-11 72.0 56 64.3
Cpa.g.sc39.49 Carica papaya HOM05D000846 ORTHO05D006755 4.5e-11 71.2 60 60.0
Cpa.g.sc120.50 Carica papaya HOM05D006146 ORTHO05D007924 5.9e-11 70.9 92 45.7
Hma1.2p1_1349F.1_g277350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.8e-11 70.5 48 68.8
Cpa.g.sc63.40 Carica papaya HOM05D000002 ORTHO05D000047 2.3e-10 68.9 48 68.8
TPR.G28095 Trifolium pratense HOM05D000002 ORTHO05D000001 2.3e-10 68.9 48 68.8
CSS0010794 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.6e-10 67.4 42 71.4
Hma1.2p1_1841F.1_g304990 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.6e-10 67.4 58 58.6
Cpa.g.sc150.60 Carica papaya HOM05D000002 ORTHO05D000047 8.6e-10 67.0 55 60.0
Hma1.2p1_0217F.1_g091730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.6e-10 67.0 60 61.7
Hma1.2p1_0744F.1_g211780 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.6e-10 67.0 58 60.3
Cpa.g.sc20.50 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-09 66.6 55 58.2
Cpa.g.sc28.123 Carica papaya HOM05D000207 ORTHO05D000047 1.1e-09 66.6 43 72.1
Cpa.g.sc31.105 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-09 66.6 44 70.5
Cpa.g.sc608.3 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-09 66.6 44 68.2
Cpa.g.sc10.112 Carica papaya HOM05D000002 ORTHO05D000047 1.9e-09 65.9 43 72.1
Cpa.g.sc67.66 Carica papaya HOM05D000002 ORTHO05D000047 1.9e-09 65.9 60 56.7
Hma1.2p1_0004F.1_g004100 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-09 65.9 57 63.2
Hma1.2p1_0079F.1_g041630 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-09 65.9 57 63.2
Hma1.2p1_0450F.1_g155525 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-09 65.9 61 62.3
Hma1.2p1_0450F.1_g155530 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-09 65.9 61 62.3
Hma1.2p1_0450F.1_g155540 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-09 65.9 61 62.3
Hma1.2p1_0450F.1_g155545 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-09 65.9 61 62.3
Hma1.2p1_0232F.1_g097650 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.5e-09 65.5 57 61.4
Hma1.2p1_0349F.1_g132140 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.3e-09 65.1 53 62.3
Hma1.2p1_1113F.1_g258670 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.3e-09 65.1 50 62.0
SHI23105 Sapria himalayana HOM05D000002 ORTHO05D000047 3.3e-09 65.1 56 58.9
SHI48864 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-09 64.7 56 58.9
Cpa.g.sc44.107 Carica papaya HOM05D000002 ORTHO05D000047 7.3e-09 63.9 44 68.2
Cpa.g.sc73.41 Carica papaya HOM05D000002 ORTHO05D000047 7.3e-09 63.9 43 65.1
Hma1.2p1_0074F.1_g038980 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.3e-09 63.9 57 61.4
CSS0001169 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 9.5e-09 63.5 42 69.0
Cpa.g.sc474.2 Carica papaya HOM05D000002 ORTHO05D000047 9.5e-09 63.5 44 70.5
Cpa.g.sc71.36 Carica papaya HOM05D000002 ORTHO05D000047 9.5e-09 63.5 43 69.8
Cpa.g.sc2.306 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-08 63.2 52 59.6
Hma1.2p1_0219F.1_g092870 Hydrangea macrophylla HOM05D000384 ORTHO05D000047 1.2e-08 63.2 57 59.6
GSVIVG01038208001 Vitis vinifera HOM05D000002 ORTHO05D000047 1.2e-08 63.2 42 69.0
CSS0000519 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-08 62.8 42 69.0
CSS0000858 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-08 62.8 42 69.0
CSS0001250 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-08 62.8 42 69.0
CSS0004866 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-08 62.8 42 69.0
CSS0007796 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-08 62.8 42 69.0
CSS0010335 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-08 62.8 42 69.0
CSS0011005 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-08 62.8 42 69.0
CSS0017511 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-08 62.8 42 69.0
CSS0017883 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-08 62.8 42 69.0
CSS0022055 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-08 62.8 42 69.0
CSS0023724 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-08 62.8 42 69.0
CSS0027817 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-08 62.8 42 69.0
CSS0032452 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-08 62.8 42 69.0
CSS0033236 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-08 62.8 42 69.0
CSS0037461 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-08 62.8 42 69.0
CSS0038170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-08 62.8 42 69.0
CSS0038278 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-08 62.8 42 69.0
CSS0039193 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-08 62.8 42 69.0
CSS0041031 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-08 62.8 42 69.0
CSS0048989 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-08 62.8 42 69.0
CSS0050398 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-08 62.8 42 69.0
Cpa.g.sc5.32 Carica papaya HOM05D000002 ORTHO05D000047 1.6e-08 62.8 42 71.4
Hma1.2p1_3882F.1_g337890 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.6e-08 62.8 42 69.0
TWI23G0973 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 1.6e-08 62.8 41 68.3
Cpa.g.sc44.34 Carica papaya HOM05D000002 ORTHO05D000047 2.1e-08 62.4 44 70.5
Cpa.g.sc5.114 Carica papaya HOM05D000002 ORTHO05D000047 2.1e-08 62.4 58 55.2
Cpa.g.sc6.149 Carica papaya HOM05D000002 ORTHO05D000047 2.1e-08 62.4 55 61.8
CSS0029482 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-08 62.0 42 69.0
Cpa.g.sc0.122 Carica papaya HOM05D000002 ORTHO05D000047 2.8e-08 62.0 44 65.9
Cpa.g.sc122.32 Carica papaya HOM05D000002 ORTHO05D000047 2.8e-08 62.0 44 63.6
Cpa.g.sc15.70 Carica papaya HOM05D000002 ORTHO05D000047 2.8e-08 62.0 44 63.6
Cpa.g.sc96.23 Carica papaya HOM05D000002 ORTHO05D000047 2.8e-08 62.0 44 63.6
CSS0003806 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.6e-08 61.6 42 66.7
CSS0004509 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.6e-08 61.6 42 66.7
CSS0005779 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.6e-08 61.6 42 66.7
CSS0005870 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.6e-08 61.6 42 66.7
CSS0006173 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.6e-08 61.6 42 66.7
CSS0008635 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.6e-08 61.6 42 66.7
CSS0014620 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.6e-08 61.6 42 66.7
CSS0015126 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.6e-08 61.6 42 66.7
CSS0024888 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.6e-08 61.6 42 66.7
CSS0033964 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.6e-08 61.6 42 66.7
Cpa.g.sc202.10 Carica papaya HOM05D000002 ORTHO05D000047 3.6e-08 61.6 44 63.6
Cpa.g.sc5.346 Carica papaya HOM05D000002 ORTHO05D000047 3.6e-08 61.6 42 69.0
Hma1.2p1_0164F.1_g073240 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.6e-08 61.6 53 60.4
Cpa.g.sc11.108 Carica papaya HOM05D000002 ORTHO05D000047 4.7e-08 61.2 43 62.8
Cpa.g.sc95.11 Carica papaya HOM05D002228 ORTHO05D002347 4.7e-08 61.2 44 63.6
Hma1.2p1_0018F.1_g013420 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.7e-08 61.2 41 65.9
CSS0024170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.1e-08 60.8 42 66.7
CSS0004984 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.0e-08 60.5 53 58.5
Cpa.g.sc15.92 Carica papaya HOM05D001549 ORTHO05D003098 8.0e-08 60.5 43 65.1
Cpa.g.sc332.6 Carica papaya HOM05D000002 ORTHO05D000047 8.0e-08 60.5 44 65.9
Cpa.g.sc58.26 Carica papaya HOM05D000002 ORTHO05D000047 8.0e-08 60.5 44 63.6
CSS0034843 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-07 60.1 42 64.3
Cpa.g.sc133.6 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-07 59.7 60 53.3
Cpa.g.sc34.189 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-07 59.7 43 65.1
Ca_11532_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 1.8e-07 59.3 48 56.2
CSS0008463 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.0e-07 58.5 42 64.3
CSS0045320 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.0e-07 58.5 42 61.9
Cpa.g.sc301.5 Carica papaya HOM05D000002 ORTHO05D000047 3.0e-07 58.5 40 67.5
Cpa.g.sc7.141 Carica papaya HOM05D000002 ORTHO05D000047 3.0e-07 58.5 46 54.3
Ca_08364_v3 Cicer arietinum L. HOM05D007163 ORTHO05D009213 3.0e-07 58.5 44 68.2
Hma1.2p1_0020F.1_g014090 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.0e-07 58.5 41 63.4
Cpa.g.sc20.131 Carica papaya HOM05D004423 ORTHO05D000047 4.0e-07 58.2 40 67.5
Hma1.2p1_0526F.1_g172830 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.0e-07 58.2 41 63.4
Cpa.g.sc43.36 Carica papaya HOM05D000246 ORTHO05D008363 5.2e-07 57.8 44 61.4
Cpa.g.sc63.26 Carica papaya HOM05D005078 ORTHO05D007574 5.2e-07 57.8 44 61.4
Cpa.g.sc67.4 Carica papaya HOM05D000002 ORTHO05D000047 5.2e-07 57.8 55 54.5
Cpa.g.sc7.260 Carica papaya HOM05D000002 ORTHO05D000047 5.2e-07 57.8 60 51.7
Hma1.2p1_0072F.1_g038350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.2e-07 57.8 40 70.0
Hma1.2p1_0172F.1_g076320 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.2e-07 57.8 56 51.8
Hma1.2p1_0247F.1_g101820 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.2e-07 57.8 48 58.3
Hma1.2p1_0530F.1_g173310 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.2e-07 57.8 41 65.9
TPR.G20867 Trifolium pratense HOM05D000002 ORTHO05D000047 5.2e-07 57.8 41 68.3
Cpa.g.sc10.11 Carica papaya HOM05D000002 ORTHO05D000047 6.8e-07 57.4 43 62.8
Hma1.2p1_1513F.1_g288010 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.8e-07 57.4 46 60.9
Nn5g30282 Nelumbo nucifera HOM05D000002 ORTHO05D000047 6.8e-07 57.4 42 64.3
Nn5g30897 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.2e-06 56.6 42 61.9
Cpa.g.sc164.3 Carica papaya HOM05D000002 ORTHO05D000047 1.5e-06 56.2 44 59.1
Nn1g04145 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.5e-06 56.2 42 64.3
Cpa.g.sc24.57 Carica papaya HOM05D000002 ORTHO05D000047 2.0e-06 55.8 40 65.0
Cpa.g.sc41.68 Carica papaya HOM05D000002 ORTHO05D000047 2.0e-06 55.8 53 54.7
Ca_24124_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 2.0e-06 55.8 42 69.0
CSS0004286 Camellia sinensis var. sinensis HOM05D000399 ORTHO05D000304 2.6e-06 55.5 38 68.4
Cpa.g.sc4.61 Carica papaya HOM05D000002 ORTHO05D000047 2.6e-06 55.5 48 54.2
Hma1.2p1_0503F.1_g168050 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.4e-06 55.1 50 58.0
Nn2g11309 Nelumbo nucifera HOM05D000002 ORTHO05D000047 3.4e-06 55.1 42 59.5
Cpa.g.sc72.7 Carica papaya HOM05D000002 ORTHO05D000047 5.7e-06 54.3 44 59.1
Cpa.g.sc1241.3 Carica papaya HOM05D000002 ORTHO05D000047 7.5e-06 53.9 38 68.4
Hma1.2p1_0210F.1_g089480 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.5e-06 53.9 43 58.1
Hma1.2p1_0812F.1_g222220 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.5e-06 53.9 43 58.1
Cpa.g.sc19.215 Carica papaya HOM05D000002 ORTHO05D000047 9.8e-06 53.5 44 56.8
Cpa.g.sc59.53 Carica papaya HOM05D000002 ORTHO05D000047 9.8e-06 53.5 44 54.5


User provided reference genes

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