Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc79.12 Carica papaya HOM05D000181 ORTHO05D007406 9.7e-209 729.9 380 100.0
Thecc.03G300400 Theobroma cacao HOM05D000181 ORTHO05D007406 2.8e-147 525.8 377 72.1
Duzib084G0413 Durio zibethinus HOM05D000181 ORTHO05D007406 2.0e-145 519.6 377 71.6
Gohir.A08G112300 Gossypium hirsutum HOM05D000181 ORTHO05D007406 1.0e-141 507.3 377 71.4
Gorai.004G132200 Gossypium raimondii HOM05D000181 ORTHO05D007406 1.7e-141 506.5 378 71.2
Gohir.D08G125332 Gossypium hirsutum HOM05D000181 ORTHO05D007406 7.4e-132 474.6 371 68.5
Ciclev10018718m.g Citrus clementina HOM05D000181 ORTHO05D007406 1.6e-131 473.4 375 65.6
Aa31LG6G7180 Aethionema arabicum HOM05D000181 ORTHO05D007406 2.1e-131 473.0 376 64.9
Atru.chr9.1924 Acer truncatum HOM05D000181 ORTHO05D007406 6.2e-131 471.5 379 66.2
Potri.001G089800 Populus trichocarpa HOM05D000181 ORTHO05D007406 4.9e-128 461.8 375 66.1
Prupe.5G122500 Prunus persica HOM05D000181 ORTHO05D007406 7.1e-127 458.0 376 64.9
MD06G1109500 Malus domestica HOM05D000181 ORTHO05D007406 1.2e-126 457.2 376 63.6
Sabra01G0066200 Salix brachista HOM05D000181 ORTHO05D007406 1.6e-126 456.8 375 65.6
TAR629G1994 Trochodendron aralioides HOM05D000181 ORTHO05D007406 3.5e-126 455.7 381 62.2
Thhalv10024337m.g Eutrema salsugineum HOM05D000181 ORTHO05D007406 1.8e-125 453.4 376 63.3
PGR031G3953 Punica granatum HOM05D000181 ORTHO05D007406 5.1e-125 451.8 379 63.6
AT4G23940 Arabidopsis thaliana HOM05D000181 ORTHO05D007406 1.1e-124 450.7 379 62.8
Eucgr.D01758 Eucalyptus grandis HOM05D000181 ORTHO05D007406 1.9e-124 449.9 386 60.9
Manes.02G008600 Manihot esculenta HOM05D000181 ORTHO05D007406 4.3e-124 448.7 375 64.8
QL02p030075 Quercus lobata HOM05D000181 ORTHO05D007406 4.3e-124 448.7 377 62.3
RcHm_v2.0_Chr7g0194221 Rosa chinensis HOM05D000181 ORTHO05D007406 4.3e-124 448.7 378 64.3
Sp7g21910 Schrenkiella parvula HOM05D000181 ORTHO05D007406 7.4e-124 448.0 376 63.0
CARHR231350 Cardamine hirsuta HOM05D000181 ORTHO05D007406 1.6e-123 446.8 381 63.3
Cfa011985 Carpinus fangiana HOM05D000181 ORTHO05D007406 2.1e-123 446.4 379 63.1
TWI60G1246 Tripterygium wilfordii HOM05D000181 ORTHO05D007406 8.2e-123 444.5 375 66.4
ClCG07G011510 Citrullus lanatus HOM05D000181 ORTHO05D007406 3.1e-122 442.6 379 61.7
AL7G29370 Arabidopsis lyrata HOM05D000181 ORTHO05D007406 2.0e-121 439.9 377 61.5
Haze_09087 Corylus avellana HOM05D000181 ORTHO05D007406 2.0e-121 439.9 389 62.2
Carub.0007s1714 Capsella rubella HOM05D000181 ORTHO05D007406 2.6e-121 439.5 381 61.7
Sed0021063 Sechium edule HOM05D000181 ORTHO05D007406 7.4e-116 421.4 376 59.6
CSS0016692 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D007406 9.7e-116 421.0 349 65.0
MD14G1130500 Malus domestica HOM05D000181 ORTHO05D007406 1.6e-115 420.2 375 59.5
FAN18G2206 Fragaria x ananassa HOM05D002356 ORTHO05D007406 2.6e-113 412.9 375 59.7
FAN13G1079 Fragaria x ananassa HOM05D002356 ORTHO05D007406 1.3e-112 410.6 375 59.5
FAN18G2731 Fragaria x ananassa HOM05D000181 ORTHO05D007406 1.3e-112 410.6 375 59.5
FvH4_5g04870 Fragaria vesca HOM05D000181 ORTHO05D007406 3.8e-112 409.1 375 59.2
CSS0016723 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D007406 5.5e-111 405.2 383 59.3
FAN08G0678 Fragaria x ananassa HOM05D002356 ORTHO05D007406 1.2e-110 404.1 375 58.7
FAN04G1057 Fragaria x ananassa HOM05D002356 ORTHO05D007406 3.6e-110 402.5 375 58.4
Lj4g0006821 Lotus japonicus HOM05D000181 ORTHO05D007406 3.0e-109 399.4 344 61.0
CANSAT21G0203 Cannabis sativa HOM05D000181 ORTHO05D007406 5.1e-109 398.7 378 57.9
Sc22g0004900 Simmondsia chinensis HOM05D000181 ORTHO05D007406 1.1e-108 397.5 385 56.9
BraA01t01465Z Brassica rapa HOM05D002356 ORTHO05D007406 1.7e-107 393.7 380 58.7
CsaV3_4G006700 Cucumis sativus L. HOM05D000181 ORTHO05D007406 1.7e-107 393.7 384 56.0
A01p15250 Brassica napus HOM05D002356 ORTHO05D007406 3.7e-107 392.5 380 58.9
PSO170G1750 Papaver somniferum HOM05D000181 ORTHO05D007406 6.3e-107 391.7 363 56.7
C01p19180 Brassica napus HOM05D002356 ORTHO05D007406 8.2e-107 391.3 381 59.6
BcaC09g50928 Brassica carinata HOM05D000181 ORTHO05D007406 1.0e-104 384.4 381 58.8
BolC1t01844H Brassica oleracea HOM05D002356 ORTHO05D007406 1.0e-104 384.4 381 58.8
PSO063G6474 Papaver somniferum HOM05D000181 ORTHO05D007406 2.2e-104 383.3 363 55.6
Lalb_Chr16g0390691 Lupinus albus HOM05D000181 ORTHO05D007406 6.5e-104 381.7 366 54.9
Hma1.2p1_0440F.1_g153440 Hydrangea macrophylla HOM05D000181 ORTHO05D007406 4.2e-103 379.0 388 54.6
Migut.A00625 Erythranthe guttata HOM05D000181 ORTHO05D007406 7.2e-103 378.3 310 63.9
Glyma.08G023900 Glycine max HOM05D000181 ORTHO05D007406 2.1e-102 376.7 332 60.5
MSTRG.25690 Avicennia marina HOM05D000181 ORTHO05D007406 4.7e-102 375.6 375 54.4
VMungo0251G1494 Vigna mungo HOM05D000181 ORTHO05D007406 7.9e-102 374.8 333 60.1
BcaNung01101 Brassica carinata HOM05D000181 ORTHO05D007406 2.3e-101 373.2 380 56.6
Oeu038548.1 Olea europaea HOM05D000181 ORTHO05D007406 3.0e-101 372.9 359 56.5
Solyc08g082530.4 Solanum lycopersicum HOM05D000181 ORTHO05D007406 3.9e-101 372.5 391 54.2
Sopen08g030790 Solanum pennellii HOM05D000181 ORTHO05D007406 8.8e-101 371.3 369 56.4
Nitab4.5_0005962g0040 Nicotiana tabacum HOM05D000181 ORTHO05D007406 1.5e-100 370.5 381 53.8
Nn1g00249 Nelumbo nucifera HOM05D000181 ORTHO05D007406 2.0e-100 370.2 388 54.6
SalBow1G5541 Salvia bowleyana HOM05D000181 ORTHO05D007406 4.4e-100 369.0 374 53.7
arahy.Tifrunner.gnm1.ann1.27DD66 Arachis hypogaea HOM05D000181 ORTHO05D007406 2.2e-99 366.7 335 54.9
Nitab4.5_0000798g0070 Nicotiana tabacum HOM05D000181 ORTHO05D007406 3.7e-99 365.9 381 53.5
PGSC0003DMG400012269 Solanum tuberosum HOM05D000181 ORTHO05D007406 4.8e-99 365.5 382 54.5
arahy.Tifrunner.gnm1.ann1.K2TKXN Arachis hypogaea HOM05D000181 ORTHO05D007406 1.1e-98 364.4 335 54.6
Peaxi162Scf00074g00638 Petunia axillaris HOM05D000181 ORTHO05D007406 4.1e-98 362.5 342 56.7
Phvul.002G299700 Phaseolus vulgaris HOM05D000181 ORTHO05D007406 7.0e-98 361.7 311 59.2
Peaxi162Scf00074g00741 Petunia axillaris HOM05D000181 ORTHO05D007406 1.2e-97 360.9 342 56.7
Dinv38822 Davidia involucrata HOM05D006022 ORTHO05D007406 6.5e-96 355.1 277 66.4
Cc08_g16240 Coffea canephora HOM05D000181 ORTHO05D007406 9.4e-95 351.3 353 55.2
GSVIVG01019239001 Vitis vinifera HOM05D000181 ORTHO05D007406 1.2e-94 350.9 320 59.4
Hund14209 Selenicereus undatus HOM05D000181 ORTHO05D007406 2.7e-94 349.7 376 53.7
AUR62019859 Chenopodium quinoa HOM05D000181 ORTHO05D007406 1.8e-93 347.1 384 51.8
TPR.G3384 Trifolium pratense HOM05D000181 ORTHO05D007406 5.2e-93 345.5 338 54.7
MBI07_g46373_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D007406 1.5e-92 344.0 305 60.7
Actinidia27312 Actinidia chinensis HOM05D000181 ORTHO05D007406 2.0e-92 343.6 351 53.3
EL10Ac5g12935 Beta vulgaris HOM05D000181 ORTHO05D007406 2.0e-92 343.6 385 52.2
Ca_17471_v3 Cicer arietinum L. HOM05D000181 ORTHO05D007406 5.7e-92 342.0 333 55.3
Aqoxy5G04277 Aquilegia oxysepala HOM05D000181 ORTHO05D007406 7.4e-92 341.7 352 53.1
COL.COLO4_10722 Corchorus olitorius HOM05D000181 ORTHO05D007406 7.4e-92 341.7 375 52.8
Lj2A164T57 Lonicera japonica HOM05D000181 ORTHO05D007406 3.1e-90 336.3 394 50.5
CAN.G567.9 Capsicum annuum HOM05D000181 ORTHO05D007406 9.1e-90 334.7 350 52.9
Medtr8g099605 Medicago truncatula HOM05D000181 ORTHO05D007406 2.0e-89 333.6 335 52.8
AUR62010860 Chenopodium quinoa HOM05D000181 ORTHO05D007406 2.2e-88 330.1 390 49.5
ATR0602G289 Amborella trichopoda HOM05D000181 ORTHO05D007406 1.1e-87 327.8 339 52.8
MBI07_g14279_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D007406 2.5e-87 326.6 376 51.6
HanXRQChr13g0415441 Helianthus annuus HOM05D000181 ORTHO05D007406 4.0e-85 319.3 382 50.5
SGA_v2.0_scaffold305G47993 Striga asiatica HOM05D000181 ORTHO05D007406 2.2e-83 313.5 328 54.9
Lsat_1_v5_gn_6_83680 Lactuca sativa HOM05D000181 ORTHO05D007406 2.8e-83 313.2 371 50.4
DCAR_029910 Daucus carota HOM05D000181 ORTHO05D007406 7.7e-81 305.1 277 56.7
Ah.12g052670 Amaranthus hybridus HOM05D000181 ORTHO05D007406 8.5e-80 301.6 386 48.2
unitig_37.g12129 Utricularia gibba HOM05D000181 ORTHO05D007406 1.7e-75 287.3 321 47.7
CiPaw.11G119200 Carya illinoinensis HOM05D000181 ORTHO05D007406 5.2e-69 265.8 207 63.3
MELO3C016278.2 Cucumis melo HOM05D000181 ORTHO05D007406 4.9e-67 259.2 191 67.0
ECA240G1581 Erigeron canadensis HOM05D000181 ORTHO05D007406 6.6e-56 222.2 231 53.7
AagrBONN_evm.TU.Sc2ySwM_362.2662 Anthoceros agrestis HOM05D000181 ORTHO05D007406 3.3e-55 219.9 374 35.8
MELO3C001406.2 Cucumis melo HOM05D000181 ORTHO05D007406 1.2e-54 218.0 245 52.2
Oeu009976.1 Olea europaea HOM05D000181 ORTHO05D007406 4.0e-53 213.0 266 45.5
Mapoly0052s0067 Marchantia polymorpha HOM05D000181 ORTHO05D007406 5.2e-53 212.6 341 38.1
CDE04G1864 Ceratophyllum demersum HOM05D000181 ORTHO05D007406 2.0e-52 210.7 160 63.1
HPP92_024173 Vanilla planifolia HOM05D000181 ORTHO05D007406 1.2e-46 191.4 191 51.8
HPP92_027157 Vanilla planifolia HOM05D000181 ORTHO05D007406 1.6e-46 191.0 191 51.3
MBI07_g46802_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D007406 3.4e-44 183.3 241 45.6
Pp3c22_8480 Physcomitrium patens HOM05D000181 ORTHO05D007406 1.2e-41 174.9 297 33.0
Pp3c19_2770 Physcomitrium patens HOM05D000181 ORTHO05D007406 1.0e-40 171.8 288 34.7
SMO147G0268 Selaginella moellendorffii HOM05D000181 ORTHO05D007406 1.9e-34 151.0 284 35.6
SEGI_35200 Sequoiadendron giganteum HOM05D000181 ORTHO05D007406 1.2e-33 148.3 209 39.7
Dinv37517 Davidia involucrata HOM05D000181 ORTHO05D007406 1.9e-31 141.0 108 65.7
Psat0s1312g0080 Pisum sativum HOM05D000181 ORTHO05D007406 1.7e-24 117.9 103 53.4
Dinv37518 Davidia involucrata HOM05D000181 ORTHO05D182714 2.2e-19 100.9 253 32.8
Gohir.A12G183400 Gossypium hirsutum HOM05D000181 ORTHO05D007406 4.9e-19 99.8 82 65.9
Medtr2g095900 Medicago truncatula HOM05D000310 ORTHO05D265259 2.5e-15 87.4 99 50.5


User provided reference genes

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