Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc78.26 Carica papaya HOM05D007850 ORTHO05D009594 7.2e-34 146.7 78 100.0
Manes.03G028100 Manihot esculenta HOM05D007850 ORTHO05D009594 3.4e-23 111.3 74 81.1
Potri.015G106700 Populus trichocarpa HOM05D007850 ORTHO05D009594 1.1e-21 106.3 73 75.3
Cfa003164 Carpinus fangiana HOM05D007850 ORTHO05D009594 3.1e-21 104.8 75 77.3
Haze_25835 Corylus avellana HOM05D007850 ORTHO05D009594 5.4e-21 104.0 72 77.8
Duzib168G0149 Durio zibethinus HOM05D007850 ORTHO05D009594 5.4e-21 104.0 72 76.4
ClCG03G016060 Citrullus lanatus HOM05D007850 ORTHO05D009594 2.7e-20 101.7 71 78.9
Gohir.A07G009000 Gossypium hirsutum HOM05D007850 ORTHO05D009594 2.7e-20 101.7 72 72.2
Gohir.D07G009300 Gossypium hirsutum HOM05D007850 ORTHO05D009594 2.7e-20 101.7 72 72.2
Gorai.001G009500 Gossypium raimondii HOM05D007850 ORTHO05D009594 2.7e-20 101.7 72 72.2
Thecc.09G099000 Theobroma cacao HOM05D007850 ORTHO05D009594 5.9e-20 100.5 72 73.6
MELO3C015421.2 Cucumis melo HOM05D007850 ORTHO05D009594 2.3e-19 98.6 71 77.5
Gohir.A06G068000 Gossypium hirsutum HOM05D007850 ORTHO05D009594 2.3e-19 98.6 72 72.2
Sabra12G0079700 Salix brachista HOM05D007850 ORTHO05D009594 2.9e-19 98.2 67 71.6
Gohir.D08G264200 Gossypium hirsutum HOM05D007850 ORTHO05D009594 3.8e-19 97.8 76 69.7
Gorai.004G282100 Gossypium raimondii HOM05D007850 ORTHO05D009594 3.8e-19 97.8 76 69.7
Eucgr.K01055 Eucalyptus grandis HOM05D007850 ORTHO05D009594 8.6e-19 96.7 78 70.5
Gohir.D06G066600 Gossypium hirsutum HOM05D007850 ORTHO05D009594 1.5e-18 95.9 72 70.8
Nn8g39046 Nelumbo nucifera HOM05D007850 ORTHO05D009594 1.9e-18 95.5 79 65.8
Rhsim05G0038300 Rhododendron simsii HOM05D007850 ORTHO05D009594 3.3e-18 94.7 82 65.9
Gohir.A08G243300 Gossypium hirsutum HOM05D007850 ORTHO05D009594 5.5e-18 94.0 76 68.4
Gorai.010G078100 Gossypium raimondii HOM05D007850 ORTHO05D009594 7.2e-18 93.6 72 69.4
CANSAT56G2953 Cannabis sativa HOM05D007850 ORTHO05D009594 9.5e-18 93.2 73 65.8
Hma1.2p1_0208F.1_g088080 Hydrangea macrophylla HOM05D007850 ORTHO05D009594 1.4e-16 89.4 74 67.6
Actinidia17514 Actinidia chinensis HOM05D007850 ORTHO05D009594 5.2e-16 87.4 73 65.8
Phvul.004G174800 Phaseolus vulgaris HOM05D007850 ORTHO05D009594 5.2e-16 87.4 73 69.9
Psat1g048160 Pisum sativum HOM05D007850 ORTHO05D009594 5.2e-16 87.4 74 67.6
QL08p048105 Quercus lobata HOM05D007850 ORTHO05D009594 5.2e-16 87.4 72 69.4
RcHm_v2.0_Chr2g0092131 Rosa chinensis HOM05D007850 ORTHO05D009594 6.8e-16 87.0 75 65.3
Cc06_g10600 Coffea canephora HOM05D007850 ORTHO05D009594 8.9e-16 86.7 78 61.5
Nitab4.5_0003079g0010 Nicotiana tabacum HOM05D007850 ORTHO05D009594 8.9e-16 86.7 74 68.9
Ciclev10010071m.g Citrus clementina HOM05D007850 ORTHO05D009594 1.2e-15 86.3 73 65.8
Glyma.07G125500 Glycine max HOM05D007850 ORTHO05D009594 1.2e-15 86.3 73 67.1
FvH4_1g06390 Fragaria vesca HOM05D007850 ORTHO05D009594 2.0e-15 85.5 70 64.3
FAN19G1200 Fragaria x ananassa HOM05D007850 ORTHO05D009594 2.0e-15 85.5 70 64.3
Lalb_Chr22g0352511 Lupinus albus HOM05D007850 ORTHO05D009594 2.6e-15 85.1 80 68.8
arahy.Tifrunner.gnm1.ann1.X02Y3Q Arachis hypogaea HOM05D007850 ORTHO05D009594 3.4e-15 84.7 75 66.7
Nitab4.5_0000566g0200 Nicotiana tabacum HOM05D007850 ORTHO05D009594 3.4e-15 84.7 74 67.6
Prupe.7G218200 Prunus persica HOM05D007850 ORTHO05D009594 3.4e-15 84.7 78 62.8
Ca_25585_v3 Cicer arietinum L. HOM05D007850 ORTHO05D009594 4.4e-15 84.3 74 66.2
FAN23G2338 Fragaria x ananassa HOM05D007850 ORTHO05D009594 4.4e-15 84.3 70 62.9
FAN26G0602 Fragaria x ananassa HOM05D007850 ORTHO05D009594 4.4e-15 84.3 70 62.9
FAN26G2005 Fragaria x ananassa HOM05D007850 ORTHO05D009594 4.4e-15 84.3 70 62.9
FAN28G1089 Fragaria x ananassa HOM05D007850 ORTHO05D009594 5.7e-15 84.0 70 62.9
TAR624G0098 Trochodendron aralioides HOM05D007850 ORTHO05D009594 5.7e-15 84.0 74 63.5
Medtr6g090490 Medicago truncatula HOM05D007850 ORTHO05D009594 7.5e-15 83.6 77 64.9
SalBow6G1226 Salvia bowleyana HOM05D007850 ORTHO05D009594 1.3e-14 82.8 70 64.3
Ciclev10006350m.g Citrus clementina HOM05D007850 ORTHO05D009594 1.7e-14 82.4 71 64.8
Glyma.01G006200 Glycine max HOM05D007850 ORTHO05D009594 1.7e-14 82.4 73 65.8
QL03p050300 Quercus lobata HOM05D007850 ORTHO05D009594 1.7e-14 82.4 72 68.1
CSS0000041 Camellia sinensis var. sinensis HOM05D007850 ORTHO05D009594 2.2e-14 82.0 76 61.8
Sed0003200 Sechium edule HOM05D007850 ORTHO05D009594 2.2e-14 82.0 71 70.4
CsaV3_1G039900 Cucumis sativus L. HOM05D007850 ORTHO05D009594 3.7e-14 81.3 60 76.7
arahy.Tifrunner.gnm1.ann1.X1KXE8 Arachis hypogaea HOM05D012186 ORTHO05D009594 1.1e-13 79.7 76 65.8
Peaxi162Scf00944g00009 Petunia axillaris HOM05D007850 ORTHO05D009594 1.4e-13 79.3 75 62.7
Solyc12g008560.1 Solanum lycopersicum HOM05D007850 ORTHO05D009594 1.4e-13 79.3 74 64.9
TPR.G33528 Trifolium pratense HOM05D007850 ORTHO05D009594 7.0e-13 77.0 76 57.9
PGSC0003DMG400000292 Solanum tuberosum HOM05D007850 ORTHO05D009594 1.2e-12 76.3 74 62.2
Lj2g0008653 Lotus japonicus HOM05D007850 ORTHO05D009594 4.6e-12 74.3 73 61.6
Sc18g0001560 Simmondsia chinensis HOM05D007850 ORTHO05D009594 7.8e-12 73.6 74 60.8
DCAR_012035 Daucus carota HOM05D007850 ORTHO05D009594 1.7e-11 72.4 76 59.2
CAN.G1591.18 Capsicum annuum HOM05D007850 ORTHO05D009594 2.3e-11 72.0 76 57.9
CAN.G2021.4 Capsicum annuum HOM05D007850 ORTHO05D009594 2.3e-11 72.0 76 57.9
DCAR_000091 Daucus carota HOM05D007850 ORTHO05D009594 2.3e-11 72.0 76 59.2
DCAR_012032 Daucus carota HOM05D007850 ORTHO05D009594 2.3e-11 72.0 76 59.2
EL10Ac8g18368 Beta vulgaris HOM05D007850 ORTHO05D009594 1.9e-10 68.9 80 52.5
COL.COLO4_34726 Corchorus olitorius HOM05D007850 ORTHO05D009594 1.9e-10 68.9 54 70.4
CAN.G1677.12 Capsicum annuum HOM05D007850 ORTHO05D009594 2.5e-10 68.6 82 52.4
CAN.G1357.32 Capsicum annuum HOM05D007850 ORTHO05D009594 3.3e-10 68.2 76 56.6
AUR62010878 Chenopodium quinoa HOM05D007850 ORTHO05D009594 5.6e-10 67.4 77 54.5
AUR62021391 Chenopodium quinoa HOM05D007850 ORTHO05D009594 9.5e-10 66.6 73 54.8
ATR0705G131 Amborella trichopoda HOM05D007850 ORTHO05D009594 1.6e-09 65.9 73 53.4
CAN.G1084.1 Capsicum annuum HOM05D007850 ORTHO05D009594 1.6e-09 65.9 76 55.3
CAN.G1349.15 Capsicum annuum HOM05D007850 ORTHO05D009594 1.6e-09 65.9 76 55.3
Sopen12g003500 Solanum pennellii HOM05D007850 ORTHO05D009594 1.6e-09 65.9 73 57.5
Aqoxy7G01385 Aquilegia oxysepala HOM05D007850 ORTHO05D009594 2.8e-09 65.1 83 55.4
unitig_8.g4473 Utricularia gibba HOM05D007850 ORTHO05D009594 3.6e-09 64.7 69 50.7
Lsat_1_v5_gn_7_39541 Lactuca sativa HOM05D007850 ORTHO05D009594 8.0e-09 63.5 56 69.6
CDE06G1893 Ceratophyllum demersum HOM05D007850 ORTHO05D009594 3.1e-08 61.6 50 70.0
ECA240G2374 Erigeron canadensis HOM05D004751 ORTHO05D005819 7.5e-07 57.0 61 59.0
Ah.09g230500 Amaranthus hybridus HOM05D007850 ORTHO05D009594 2.9e-06 55.1 79 48.1


User provided reference genes

Program Settings