Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc77.7 Carica papaya HOM05D000718 ORTHO05D007431 2.4e-69 265.4 135 100.0
THA.LOC104822564 Tarenaya hassleriana HOM05D000718 ORTHO05D007431 1.3e-46 189.9 117 76.9
CARHR089850 Cardamine hirsuta HOM05D000718 ORTHO05D007431 1.4e-45 186.4 117 77.8
Aa31LG8G2120 Aethionema arabicum HOM05D000718 ORTHO05D007431 4.1e-45 184.9 117 76.9
Carub.0003s1457 Capsella rubella HOM05D000718 ORTHO05D007431 1.2e-44 183.3 117 75.2
Thhalv10020708m.g Eutrema salsugineum HOM05D000718 ORTHO05D007431 1.2e-44 183.3 117 75.2
Haze_09324 Corylus avellana HOM05D000718 ORTHO05D007431 1.6e-44 183.0 110 77.3
AT3G14910 Arabidopsis thaliana HOM05D000718 ORTHO05D007431 2.1e-44 182.6 117 76.1
Sp3g13120 Schrenkiella parvula HOM05D000718 ORTHO05D007431 2.1e-44 182.6 117 75.2
AL3G27230 Arabidopsis lyrata HOM05D000718 ORTHO05D007431 4.6e-44 181.4 117 76.1
BcaB06g25332 Brassica carinata HOM05D000718 ORTHO05D007431 1.7e-43 179.5 117 74.4
PGR031G2045 Punica granatum HOM05D000718 ORTHO05D007431 1.7e-43 179.5 117 72.6
Cfa019567 Carpinus fangiana HOM05D000718 ORTHO05D007431 1.5e-42 176.4 110 74.5
FAN21G3716 Fragaria x ananassa HOM05D000718 ORTHO05D007431 1.9e-42 176.0 117 75.2
Eucgr.K01884 Eucalyptus grandis HOM05D000718 ORTHO05D007431 2.5e-42 175.6 117 69.2
C05p52240 Brassica napus HOM05D000718 ORTHO05D007431 4.3e-42 174.9 117 73.5
RcHm_v2.0_Chr5g0030941 Rosa chinensis HOM05D000718 ORTHO05D007431 4.3e-42 174.9 117 74.4
FvH4_3g18310 Fragaria vesca HOM05D000718 ORTHO05D007431 1.2e-41 173.3 117 73.5
FAN11G0057 Fragaria x ananassa HOM05D000718 ORTHO05D007431 1.2e-41 173.3 117 73.5
A05p34500 Brassica napus HOM05D000718 ORTHO05D007431 1.6e-41 172.9 117 71.8
BraA05t22270Z Brassica rapa HOM05D000718 ORTHO05D007431 1.6e-41 172.9 117 71.8
CiPaw.11G160400 Carya illinoinensis HOM05D000718 ORTHO05D007431 1.6e-41 172.9 117 74.4
Prupe.4G164800 Prunus persica HOM05D000718 ORTHO05D007431 2.1e-41 172.6 110 78.2
BolC5t33913H Brassica oleracea HOM05D000718 ORTHO05D007431 2.8e-41 172.2 117 72.6
FAN25G1161 Fragaria x ananassa HOM05D000718 ORTHO05D007431 4.7e-41 171.4 117 72.6
FAN16G1727 Fragaria x ananassa HOM05D000718 ORTHO05D007431 6.2e-41 171.0 117 72.6
MD03G1243500 Malus domestica HOM05D000718 ORTHO05D007431 8.1e-41 170.6 117 74.4
Gohir.D01G042724 Gossypium hirsutum HOM05D000718 ORTHO05D007431 5.2e-40 167.9 113 70.8
Gorai.002G054700 Gossypium raimondii HOM05D000718 ORTHO05D007431 5.2e-40 167.9 113 70.8
Duzib187G1570 Durio zibethinus HOM05D000718 ORTHO05D007431 8.9e-40 167.2 113 69.9
Gohir.A01G054400 Gossypium hirsutum HOM05D000718 ORTHO05D007431 8.9e-40 167.2 113 70.8
Lj3g0001987 Lotus japonicus HOM05D000718 ORTHO05D007431 7.6e-39 164.1 117 67.5
Thecc.07G115900 Theobroma cacao HOM05D000718 ORTHO05D007431 7.6e-39 164.1 113 69.0
Actinidia12577 Actinidia chinensis HOM05D000718 ORTHO05D007431 9.9e-39 163.7 113 67.3
Peaxi162Scf00111g01475 Petunia axillaris HOM05D000718 ORTHO05D007431 9.9e-39 163.7 120 69.2
CANSAT35G0289 Cannabis sativa HOM05D000718 ORTHO05D007431 1.7e-38 162.9 116 68.1
ClCG11G017460 Citrullus lanatus HOM05D000718 ORTHO05D007431 2.2e-38 162.5 118 69.5
Thecc.07G114900 Theobroma cacao HOM05D000718 ORTHO05D007431 2.2e-38 162.5 113 69.0
Thecc.07G115200 Theobroma cacao HOM05D000718 ORTHO05D007431 2.2e-38 162.5 113 69.0
PGSC0003DMG400011947 Solanum tuberosum HOM05D000718 ORTHO05D007431 2.9e-38 162.2 120 69.2
CSS0043856 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 3.8e-38 161.8 120 66.7
MD11G1263700 Malus domestica HOM05D000718 ORTHO05D007431 3.8e-38 161.8 117 72.6
Manes.03G101200 Manihot esculenta HOM05D000718 ORTHO05D007431 3.8e-38 161.8 110 69.1
Solyc07g062450.3 Solanum lycopersicum HOM05D000718 ORTHO05D007431 3.8e-38 161.8 120 68.3
Sopen07g030690 Solanum pennellii HOM05D000718 ORTHO05D007431 3.8e-38 161.8 120 68.3
PGSC0003DMG400007071 Solanum tuberosum HOM05D000718 ORTHO05D007431 3.8e-38 161.8 120 68.3
MELO3C025639.2 Cucumis melo HOM05D000718 ORTHO05D007431 6.4e-38 161.0 118 68.6
COL.COLO4_17547 Corchorus olitorius HOM05D000718 ORTHO05D007431 8.4e-38 160.6 113 69.0
Hund02254 Selenicereus undatus HOM05D000718 ORTHO05D007431 8.4e-38 160.6 118 69.5
Sc16g0007580 Simmondsia chinensis HOM05D000718 ORTHO05D007431 1.4e-37 159.8 119 66.4
Ca_12194_v3 Cicer arietinum L. HOM05D000718 ORTHO05D007431 1.9e-37 159.5 109 67.0
Nitab4.5_0006953g0050 Nicotiana tabacum HOM05D000718 ORTHO05D007431 1.9e-37 159.5 120 68.3
CAN.G375.14 Capsicum annuum HOM05D000718 ORTHO05D007431 2.4e-37 159.1 120 65.8
TWI39G0589 Tripterygium wilfordii HOM05D000718 ORTHO05D007431 2.4e-37 159.1 117 70.1
Cc05_g11090 Coffea canephora HOM05D000718 ORTHO05D007431 4.1e-37 158.3 129 65.1
Nitab4.5_0003565g0040 Nicotiana tabacum HOM05D000718 ORTHO05D007431 4.1e-37 158.3 120 67.5
Dinv18364 Davidia involucrata HOM05D000718 ORTHO05D007431 5.4e-37 157.9 120 67.5
Lalb_Chr01g0006831 Lupinus albus HOM05D000718 ORTHO05D007431 7.1e-37 157.5 110 66.4
vmacro23465 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 7.1e-37 157.5 122 64.8
CsaV3_4G033110 Cucumis sativus L. HOM05D000718 ORTHO05D007431 9.2e-37 157.1 118 67.8
GSVIVG01014199001 Vitis vinifera HOM05D000718 ORTHO05D007431 9.2e-37 157.1 120 66.7
Ah.04g164270 Amaranthus hybridus HOM05D000718 ORTHO05D007431 1.2e-36 156.8 119 68.1
Potri.001G390700 Populus trichocarpa HOM05D000718 ORTHO05D007431 4.6e-36 154.8 110 69.1
Lj1A829G32 Lonicera japonica HOM05D000718 ORTHO05D007431 2.3e-35 152.5 113 64.6
arahy.Tifrunner.gnm1.ann1.STN4DM Arachis hypogaea HOM05D000718 ORTHO05D007431 3.0e-35 152.1 118 63.6
Nn1g09174 Nelumbo nucifera HOM05D000718 ORTHO05D007431 3.0e-35 152.1 119 65.5
Rhsim06G0207800 Rhododendron simsii HOM05D000718 ORTHO05D007431 3.0e-35 152.1 121 63.6
arahy.Tifrunner.gnm1.ann1.6IHZ0U Arachis hypogaea HOM05D000718 ORTHO05D007431 3.9e-35 151.8 118 62.7
Psat0s1037g0040 Pisum sativum HOM05D000718 ORTHO05D007431 3.9e-35 151.8 109 64.2
Atru.chr2.2147 Acer truncatum HOM05D000718 ORTHO05D007431 5.1e-35 151.4 119 63.0
Nn1g04439 Nelumbo nucifera HOM05D000718 ORTHO05D007431 5.1e-35 151.4 118 67.8
Sed0007644 Sechium edule HOM05D000718 ORTHO05D007431 5.1e-35 151.4 118 61.0
TAR627G0847 Trochodendron aralioides HOM05D000718 ORTHO05D007431 6.6e-35 151.0 118 68.6
VMungo1127G0879 Vigna mungo HOM05D000718 ORTHO05D007431 8.6e-35 150.6 119 64.7
PSO478G1672 Papaver somniferum HOM05D000718 ORTHO05D007431 1.1e-34 150.2 123 61.8
DCAR_013156 Daucus carota HOM05D000718 ORTHO05D007431 1.5e-34 149.8 117 63.2
PSO782G3001 Papaver somniferum HOM05D000718 ORTHO05D007431 1.5e-34 149.8 123 61.8
Phvul.011G162200 Phaseolus vulgaris HOM05D000718 ORTHO05D007431 1.9e-34 149.4 119 63.9
EL10Ac4g08344 Beta vulgaris HOM05D000718 ORTHO05D007431 2.5e-34 149.1 119 63.0
Glyma.06G228900 Glycine max HOM05D000718 ORTHO05D007431 2.5e-34 149.1 121 62.8
AUR62019575 Chenopodium quinoa HOM05D000718 ORTHO05D007431 3.3e-34 148.7 119 63.0
AUR62042779 Chenopodium quinoa HOM05D000718 ORTHO05D007431 4.3e-34 148.3 119 63.0
Medtr8g464030 Medicago truncatula HOM05D000718 ORTHO05D007431 1.2e-33 146.7 110 63.6
MBI07_g09566_MAGBIO Magnolia biondii HOM05D000718 ORTHO05D007431 2.1e-33 146.0 125 59.2
Glyma.12G157600 Glycine max HOM05D000718 ORTHO05D007431 2.8e-33 145.6 120 63.3
Migut.H01998 Erythranthe guttata HOM05D000718 ORTHO05D007431 4.7e-33 144.8 126 61.1
Oeu025333.1 Olea europaea HOM05D000718 ORTHO05D007431 1.1e-32 143.7 127 60.6
HanXRQChr15g0476211 Helianthus annuus HOM05D000718 ORTHO05D007431 1.4e-32 143.3 120 63.3
Psat3g077000 Pisum sativum HOM05D000718 ORTHO05D007431 1.8e-32 142.9 109 60.6
QL08p026242 Quercus lobata HOM05D000718 ORTHO05D007431 2.4e-32 142.5 117 65.0
Thecc.07G114700 Theobroma cacao HOM05D000718 ORTHO05D007431 4.0e-32 141.7 116 60.3
TPR.G16488 Trifolium pratense HOM05D000718 ORTHO05D007431 5.2e-32 141.4 110 61.8
Lsat_1_v5_gn_9_99900 Lactuca sativa HOM05D000718 ORTHO05D007431 1.5e-31 139.8 114 64.0
SGA_v2.0_scaffold130G34293 Striga asiatica HOM05D000718 ORTHO05D007431 2.2e-30 136.0 126 57.1
Lalb_Chr03g0031171 Lupinus albus HOM05D000718 ORTHO05D007431 1.9e-29 132.9 110 58.2
Aqoxy4G00321 Aquilegia oxysepala HOM05D000718 ORTHO05D007431 9.3e-29 130.6 127 55.9
SalBow7G4178 Salvia bowleyana HOM05D000718 ORTHO05D007431 1.2e-28 130.2 127 55.9
SalBow7G4376 Salvia bowleyana HOM05D000718 ORTHO05D007431 1.2e-28 130.2 127 55.9
MSTRG.14233 Avicennia marina HOM05D000718 ORTHO05D007431 3.5e-28 128.6 126 56.3
CDE04G1093 Ceratophyllum demersum HOM05D000718 ORTHO05D007431 4.6e-28 128.3 112 52.7
CSS0014195 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 1.3e-27 126.7 118 61.0
ECA240G1747 Erigeron canadensis HOM05D000718 ORTHO05D007431 1.3e-27 126.7 112 56.2
CSS0021542 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 5.1e-27 124.8 98 65.3
SHI27609 Sapria himalayana HOM05D000718 ORTHO05D007431 5.1e-27 124.8 110 54.5
ATR0602G196 Amborella trichopoda HOM05D000718 ORTHO05D007431 9.6e-26 120.6 117 55.6
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 9.6e-26 120.6 126 53.2
SEGI_16322 Sequoiadendron giganteum HOM05D000718 ORTHO05D007431 2.4e-24 115.9 115 50.4
Thecc.07G114000 Theobroma cacao HOM05D000718 ORTHO05D007431 3.8e-22 108.6 101 56.4
unitig_52.g17395 Utricularia gibba HOM05D000718 ORTHO05D007431 2.4e-21 105.9 125 52.0
HPP92_023429 Vanilla planifolia HOM05D000718 ORTHO05D007431 7.1e-21 104.4 121 51.2
BcaB06g29518 Brassica carinata HOM05D000718 ORTHO05D002712 1.4e-16 90.1 65 67.7
AagrBONN_evm.TU.Sc2ySwM_228.1801 Anthoceros agrestis HOM05D000718 ORTHO05D007431 2.9e-14 82.4 115 44.3
vmacro11939 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.6e-12 76.6 60 61.7
Pp3c4_25540 Physcomitrium patens HOM05D000718 ORTHO05D007431 1.5e-10 70.1 114 43.0
Os09g0315800 Oryza sativa ssp. japonica HOM05D000718 ORTHO05D007431 1.6e-09 66.6 116 39.7
Mapoly0061s0004 Marchantia polymorpha HOM05D000718 ORTHO05D007431 1.1e-08 63.9 103 37.9
SMO367G0522 Selaginella moellendorffii HOM05D000718 ORTHO05D007431 2.6e-07 59.3 114 35.1


User provided reference genes

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