Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc77.63 Carica papaya HOM05D006003 ORTHO05D007388 4.1e-165 584.7 312 100.0
Dinv13362 Davidia involucrata HOM05D006003 ORTHO05D007388 3.2e-125 452.2 313 72.2
CSS0003385 Camellia sinensis var. sinensis HOM05D006003 ORTHO05D007388 2.6e-119 432.6 313 69.0
Atru.chr2.1938 Acer truncatum HOM05D006003 ORTHO05D007388 1.7e-118 429.9 313 69.3
Hma1.2p1_0050F.1_g028770 Hydrangea macrophylla HOM05D006003 ORTHO05D007388 2.2e-118 429.5 313 69.0
CSS0022288 Camellia sinensis var. sinensis HOM05D006003 ORTHO05D007388 2.9e-118 429.1 313 68.4
Potri.011G104400 Populus trichocarpa HOM05D006003 ORTHO05D007388 2.9e-118 429.1 307 69.4
MD11G1270000 Malus domestica HOM05D006003 ORTHO05D007388 3.8e-118 428.7 311 67.2
Atru.chr2.1967 Acer truncatum HOM05D006003 ORTHO05D007388 2.5e-117 426.0 313 68.7
Sabra11G0081200 Salix brachista HOM05D006003 ORTHO05D007388 5.5e-117 424.9 307 69.7
Gorai.002G047000 Gossypium raimondii HOM05D006003 ORTHO05D007388 9.4e-117 424.1 313 67.7
Gohir.A01G047600 Gossypium hirsutum HOM05D006003 ORTHO05D007388 2.7e-116 422.5 313 67.4
Thecc.07G133000 Theobroma cacao HOM05D006003 ORTHO05D007388 3.6e-116 422.2 313 68.4
Sabra11G0076500 Salix brachista HOM05D006003 ORTHO05D007388 1.0e-115 420.6 307 68.7
Ciclev10021233m.g Citrus clementina HOM05D006003 ORTHO05D007388 3.3e-114 415.6 313 66.5
TAR626G1650 Trochodendron aralioides HOM05D006003 ORTHO05D007388 3.3e-114 415.6 316 66.1
Eucgr.F03233 Eucalyptus grandis HOM05D006003 ORTHO05D007388 5.7e-114 414.8 314 65.6
CAN.G375.51 Capsicum annuum HOM05D006003 ORTHO05D007388 4.8e-113 411.8 315 66.3
Manes.15G098700 Manihot esculenta HOM05D006003 ORTHO05D007388 8.2e-113 411.0 307 66.1
CANSAT56G1876 Cannabis sativa HOM05D006003 ORTHO05D007388 1.8e-112 409.8 313 66.5
vmacro11973 Vaccinium macrocarpon HOM05D006003 ORTHO05D007388 3.1e-112 409.1 318 66.7
Actinidia12605 Actinidia chinensis HOM05D006003 ORTHO05D007388 4.1e-112 408.7 313 67.4
GSVIVG01014095001 Vitis vinifera HOM05D006003 ORTHO05D007388 6.9e-112 407.9 316 66.5
Haze_09249 Corylus avellana HOM05D006003 ORTHO05D007388 9.1e-112 407.5 311 70.7
TWI39G0770 Tripterygium wilfordii HOM05D006003 ORTHO05D007388 9.1e-112 407.5 310 64.2
QL08p024148 Quercus lobata HOM05D006003 ORTHO05D007388 5.9e-111 404.8 311 69.5
AUR62019651 Chenopodium quinoa HOM05D006003 ORTHO05D007388 5.0e-110 401.7 312 62.8
Prupe.4G156300 Prunus persica HOM05D006003 ORTHO05D007388 6.5e-110 401.4 316 64.2
Rhsim06G0211900 Rhododendron simsii HOM05D006003 ORTHO05D007388 1.9e-109 399.8 332 63.0
Prupe.4G156400 Prunus persica HOM05D006003 ORTHO05D007388 2.5e-109 399.4 314 62.7
Nitab4.5_0003230g0040 Nicotiana tabacum HOM05D006003 ORTHO05D007388 4.2e-109 398.7 312 63.5
PGR031G3165 Punica granatum HOM05D006003 ORTHO05D007388 4.2e-109 398.7 312 62.5
Cfa019519 Carpinus fangiana HOM05D006003 ORTHO05D007388 1.6e-108 396.7 292 70.9
PGR083G1570 Punica granatum HOM05D006003 ORTHO05D007388 2.1e-108 396.4 310 63.2
Eucgr.F01368 Eucalyptus grandis HOM05D006003 ORTHO05D007388 2.7e-108 396.0 313 64.9
Nitab4.5_0000347g0030 Nicotiana tabacum HOM05D006003 ORTHO05D007388 7.9e-108 394.4 302 65.6
PGSC0003DMG400007060 Solanum tuberosum HOM05D006003 ORTHO05D007388 3.0e-107 392.5 315 63.5
Cc05_g10700 Coffea canephora HOM05D006003 ORTHO05D007388 6.7e-107 391.3 315 63.2
TAR624G1186 Trochodendron aralioides HOM05D006003 ORTHO05D007388 6.7e-107 391.3 360 56.9
ClCG07G010140 Citrullus lanatus HOM05D006003 ORTHO05D007388 8.8e-107 391.0 309 60.8
MD11G1270100 Malus domestica HOM05D006003 ORTHO05D007388 2.0e-106 389.8 307 62.2
EL10Ac4g08418 Beta vulgaris HOM05D006003 ORTHO05D007388 2.6e-106 389.4 314 62.7
CsaV3_4G008190 Cucumis sativus L. HOM05D006003 ORTHO05D007388 1.3e-105 387.1 306 60.8
HanXRQChr14g0439341 Helianthus annuus HOM05D006003 ORTHO05D007388 1.3e-105 387.1 310 62.6
Solyc07g062150.3 Solanum lycopersicum HOM05D006003 ORTHO05D007388 6.3e-105 384.8 315 61.9
MSTRG.6692 Avicennia marina HOM05D006003 ORTHO05D007388 8.2e-105 384.4 317 62.1
MELO3C016117.2 Cucumis melo HOM05D006003 ORTHO05D007388 1.4e-104 383.6 309 60.2
Sopen07g030420 Solanum pennellii HOM05D006003 ORTHO05D007388 1.8e-104 383.3 315 61.9
Medtr2g073350 Medicago truncatula HOM05D006003 ORTHO05D007388 5.3e-104 381.7 309 62.5
FAN16G0946 Fragaria x ananassa HOM05D006003 ORTHO05D007388 7.0e-104 381.3 314 61.1
Glyma.12G234000 Glycine max HOM05D006003 ORTHO05D007388 5.9e-103 378.3 309 62.1
Sed0005123 Sechium edule HOM05D006003 ORTHO05D007388 5.9e-103 378.3 309 59.5
Ah.04g164020 Amaranthus hybridus HOM05D006003 ORTHO05D007388 7.7e-103 377.9 312 61.5
FvH4_3g17730 Fragaria vesca HOM05D006003 ORTHO05D007388 1.7e-102 376.7 314 60.5
DCAR_019616 Daucus carota HOM05D006003 ORTHO05D007388 2.2e-102 376.3 317 61.2
Lj3g0003080 Lotus japonicus HOM05D006003 ORTHO05D007388 2.5e-101 372.9 306 61.4
Lj3g0000598 Lotus japonicus HOM05D006003 ORTHO05D007388 4.2e-101 372.1 306 61.4
FAN25G0059 Fragaria x ananassa HOM05D006003 ORTHO05D007388 5.5e-101 371.7 321 58.6
THA.LOC104813991 Tarenaya hassleriana HOM05D006003 ORTHO05D007388 9.4e-101 370.9 314 63.7
Lalb_Chr20g0109151 Lupinus albus HOM05D006003 ORTHO05D007388 2.7e-100 369.4 313 61.0
Ca_03928_v3 Cicer arietinum L. HOM05D006003 ORTHO05D007388 6.1e-100 368.2 309 60.2
Ca_30126_v3 Cicer arietinum L. HOM05D006003 ORTHO05D007388 6.1e-100 368.2 309 60.2
Peaxi162Scf00111g01321 Petunia axillaris HOM05D006003 ORTHO05D007388 6.1e-100 368.2 282 65.2
Thhalv10018897m.g Eutrema salsugineum HOM05D006003 ORTHO05D007388 3.0e-99 365.9 306 65.7
Glyma.13G264900 Glycine max HOM05D006003 ORTHO05D007388 3.0e-99 365.9 306 62.4
BcaC08g47430 Brassica carinata HOM05D006003 ORTHO05D007388 4.0e-99 365.5 306 66.0
Gohir.D01G038300 Gossypium hirsutum HOM05D006003 ORTHO05D007388 5.2e-99 365.2 273 67.0
Lj1C824T4 Lonicera japonica HOM05D006003 ORTHO05D007388 5.2e-99 365.2 281 65.1
Lj8A146G66 Lonicera japonica HOM05D006003 ORTHO05D007388 6.7e-99 364.8 311 60.8
Migut.M00692 Erythranthe guttata HOM05D006003 ORTHO05D007388 1.2e-98 364.0 315 58.7
CARHR072080 Cardamine hirsuta HOM05D006003 ORTHO05D007388 4.4e-98 362.1 306 64.7
Sc16g0007750 Simmondsia chinensis HOM05D006003 ORTHO05D007388 4.4e-98 362.1 280 63.2
Aa31LG4G2370 Aethionema arabicum HOM05D006003 ORTHO05D007388 9.7e-98 360.9 311 62.1
BraA07t31893Z Brassica rapa HOM05D006003 ORTHO05D007388 9.7e-98 360.9 306 65.4
A07p43860 Brassica napus HOM05D006003 ORTHO05D007388 1.3e-97 360.5 306 65.4
Sp5g33680 Schrenkiella parvula HOM05D006003 ORTHO05D007388 1.3e-97 360.5 306 65.4
AL2G38990 Arabidopsis lyrata HOM05D006003 ORTHO05D007388 2.8e-97 359.4 311 64.3
HanXRQChr13g0389731 Helianthus annuus HOM05D006003 ORTHO05D007388 2.8e-97 359.4 310 59.7
THA.LOC104808088 Tarenaya hassleriana HOM05D006003 ORTHO05D007388 2.8e-97 359.4 310 64.5
BcaC03g15825 Brassica carinata HOM05D006003 ORTHO05D007388 3.7e-97 359.0 306 64.7
C06p52490 Brassica napus HOM05D006003 ORTHO05D007388 3.7e-97 359.0 306 64.7
BolC6t40268H Brassica oleracea HOM05D006003 ORTHO05D007388 3.7e-97 359.0 306 64.7
Psat5g233200 Pisum sativum HOM05D006003 ORTHO05D007388 4.8e-97 358.6 309 60.2
TPR.G12996 Trifolium pratense HOM05D006003 ORTHO05D007388 4.8e-97 358.6 274 63.9
A02p22240 Brassica napus HOM05D006003 ORTHO05D007388 8.2e-97 357.8 306 64.7
C02p35670 Brassica napus HOM05D006003 ORTHO05D007388 1.1e-96 357.5 306 64.4
BolC2t09587H Brassica oleracea HOM05D006003 ORTHO05D007388 1.1e-96 357.5 306 64.4
BraA02t07230Z Brassica rapa HOM05D006003 ORTHO05D007388 1.1e-96 357.5 306 64.7
AT1G78590 Arabidopsis thaliana HOM05D006003 ORTHO05D007388 5.3e-96 355.1 311 64.3
Oeu005377.2 Olea europaea HOM05D006003 ORTHO05D007388 7.0e-96 354.8 278 61.9
Lsat_1_v5_gn_9_100380 Lactuca sativa HOM05D006003 ORTHO05D007388 2.7e-95 352.8 311 58.8
Oeu059254.1 Olea europaea HOM05D006003 ORTHO05D007388 3.5e-95 352.4 281 61.6
MD03G1247500 Malus domestica HOM05D006003 ORTHO05D007388 2.2e-94 349.7 275 64.7
Carub.0002s2544 Capsella rubella HOM05D006003 ORTHO05D007388 2.9e-94 349.4 311 63.3
PSO541G5634 Papaver somniferum HOM05D006003 ORTHO05D007388 8.5e-94 347.8 327 54.4
PSO675G5422 Papaver somniferum HOM05D006003 ORTHO05D007388 2.5e-93 346.3 330 54.2
FAN21G1616 Fragaria x ananassa HOM05D006003 ORTHO05D007388 4.2e-93 345.5 314 56.7
HPP92_006378 Vanilla planifolia HOM05D006003 ORTHO05D007388 4.2e-93 345.5 307 58.3
MBI06_g08515_MAGBIO Magnolia biondii HOM05D006003 ORTHO05D007388 9.4e-93 344.4 282 66.3
SGA_v2.0_scaffold181G39767 Striga asiatica HOM05D006003 ORTHO05D007388 2.7e-92 342.8 325 54.5
ATR0602G094 Amborella trichopoda HOM05D006003 ORTHO05D007388 1.2e-90 337.4 276 59.8
Duzib268G1415 Durio zibethinus HOM05D006003 ORTHO05D007388 4.4e-90 335.5 240 70.8
SalBow8G3868 Salvia bowleyana HOM05D006003 ORTHO05D007388 3.7e-89 332.4 311 56.6
Os09g0345700 Oryza sativa ssp. japonica HOM05D006003 ORTHO05D007388 4.8e-89 332.0 320 53.1
unitig_62.g23076 Utricularia gibba HOM05D006003 ORTHO05D007388 6.3e-89 331.6 310 55.5
BcaB05g25146 Brassica carinata HOM05D006003 ORTHO05D007388 5.4e-88 328.6 278 65.5
Nn6g34421 Nelumbo nucifera HOM05D006003 ORTHO05D007388 1.3e-86 323.9 240 68.3
Dinv26706 Davidia involucrata HOM05D006003 ORTHO05D007388 1.7e-86 323.6 233 70.0
ECA240G1635 Erigeron canadensis HOM05D006003 ORTHO05D007388 2.2e-86 323.2 279 58.4
CiPaw.11G156000 Carya illinoinensis HOM05D006003 ORTHO05D007388 7.2e-85 318.2 277 64.3
arahy.Tifrunner.gnm1.ann1.U60PIC Arachis hypogaea HOM05D006003 ORTHO05D007388 2.1e-84 316.6 309 54.7
COL.COLO4_17472 Corchorus olitorius HOM05D006003 ORTHO05D007388 5.2e-83 312.0 313 55.6
SHI27565 Sapria himalayana HOM05D006003 ORTHO05D007388 2.3e-75 286.6 261 55.6
CDE10G0670 Ceratophyllum demersum HOM05D000595 ORTHO05D001274 1.2e-74 284.3 266 53.4
CDE04G1397 Ceratophyllum demersum HOM05D006003 ORTHO05D007388 1.3e-73 280.8 263 56.3
Sc03g0010720 Simmondsia chinensis HOM05D006003 ORTHO05D007388 3.7e-73 279.3 287 52.6
Phvul.005G076600 Phaseolus vulgaris HOM05D006003 ORTHO05D007388 5.0e-70 268.9 220 61.4
Mapoly0214s0005 Marchantia polymorpha HOM05D006003 ORTHO05D007388 4.1e-64 249.2 274 48.2
Pp3c14_23600 Physcomitrium patens HOM05D006003 ORTHO05D007388 4.6e-63 245.7 279 45.9
CBR_g12698 Chara braunii HOM05D006003 ORTHO05D007388 1.9e-61 240.4 326 41.7
SMO169G0094 Selaginella moellendorffii HOM05D006003 ORTHO05D007388 7.3e-61 238.4 276 45.7
Zm00001eb098430 Zea mays HOM05D006003 ORTHO05D007388 3.0e-54 216.5 216 52.8
FAN11G1972 Fragaria x ananassa HOM05D006003 ORTHO05D007388 6.8e-51 205.3 191 53.9
SalBow7G3240 Salvia bowleyana HOM05D006003 ORTHO05D007388 7.3e-45 185.3 166 55.4
RcHm_v2.0_Chr5g0029501 Rosa chinensis HOM05D006003 ORTHO05D007388 1.2e-44 184.5 137 64.2
MD03G1248900 Malus domestica HOM05D006003 ORTHO05D007388 1.7e-41 174.1 194 53.1
AUR62039577 Chenopodium quinoa HOM05D006003 ORTHO05D007388 5.6e-37 159.1 106 67.0
RcHm_v2.0_Chr5g0029511 Rosa chinensis HOM05D006003 ORTHO05D007388 1.1e-35 154.8 113 69.0
MCO14G555 Micromonas commoda HOM05D006003 ORTHO05D007388 2.7e-31 140.2 282 33.7
Psat5g275400 Pisum sativum HOM05D006003 ORTHO05D007388 1.1e-24 118.2 113 54.0


User provided reference genes

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