Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc77.52 Carica papaya HOM05D002452 ORTHO05D006766 6.3e-222 773.9 409 100.0
Actinidia12591 Actinidia chinensis HOM05D002452 ORTHO05D006766 3.3e-93 346.3 376 55.1
QL08p025729 Quercus lobata HOM05D002452 ORTHO05D006766 1.2e-92 344.4 377 57.0
Haze_09304 Corylus avellana HOM05D002452 ORTHO05D006766 1.5e-90 337.4 382 58.1
Cfa019543 Carpinus fangiana HOM05D002452 ORTHO05D006766 7.5e-90 335.1 378 57.9
vmacro11955 Vaccinium macrocarpon HOM05D002452 ORTHO05D006766 2.2e-89 333.6 380 54.7
CSS0001384 Camellia sinensis var. sinensis HOM05D002452 ORTHO05D006766 2.9e-86 323.2 377 54.4
Thecc.07G126400 Theobroma cacao HOM05D002452 ORTHO05D006766 1.1e-85 321.2 377 53.3
TAR626G0804 Trochodendron aralioides HOM05D002452 ORTHO05D006766 3.6e-84 316.2 378 53.2
Duzib213G0380 Durio zibethinus HOM05D002452 ORTHO05D006766 4.7e-84 315.8 379 52.8
Rhsim06G0210300 Rhododendron simsii HOM05D002452 ORTHO05D006766 4.0e-83 312.8 390 52.1
Potri.001G387300 Populus trichocarpa HOM05D002452 ORTHO05D006766 3.4e-82 309.7 374 54.3
TAR627G0084 Trochodendron aralioides HOM05D002452 ORTHO05D006766 4.4e-82 309.3 378 51.6
Ciclev10019497m.g Citrus clementina HOM05D002452 ORTHO05D006766 5.8e-82 308.9 385 51.9
CiPaw.12G112400 Carya illinoinensis HOM05D002452 ORTHO05D006766 7.5e-82 308.5 386 54.4
Atru.chr2.2062 Acer truncatum HOM05D002452 ORTHO05D006766 1.7e-81 307.4 379 52.5
Manes.03G099700 Manihot esculenta HOM05D002452 ORTHO05D006766 1.7e-81 307.4 379 53.3
Atru.chr10.1169 Acer truncatum HOM05D002452 ORTHO05D006766 6.4e-81 305.4 379 52.2
Gohir.A04G043100 Gossypium hirsutum HOM05D002452 ORTHO05D006766 1.1e-77 294.7 374 50.8
Prupe.4G160000 Prunus persica HOM05D002452 ORTHO05D006766 2.5e-77 293.5 386 50.8
Dinv18382 Davidia involucrata HOM05D002452 ORTHO05D006766 5.6e-77 292.4 376 51.1
COL.COLO4_17511 Corchorus olitorius HOM05D002452 ORTHO05D006766 9.5e-77 291.6 391 51.2
Lj8C147T4 Lonicera japonica HOM05D002452 ORTHO05D006766 1.6e-76 290.8 412 48.1
TWI39G0752 Tripterygium wilfordii HOM05D002452 ORTHO05D006766 1.6e-76 290.8 375 50.9
Gohir.D05G340400 Gossypium hirsutum HOM05D002452 ORTHO05D006766 1.1e-75 288.1 377 50.9
Gorai.009G366800 Gossypium raimondii HOM05D002452 ORTHO05D006766 8.9e-75 285.0 377 50.7
Nn3g21096 Nelumbo nucifera HOM05D002452 ORTHO05D006766 4.4e-74 282.7 379 50.4
Actinidia07509 Actinidia chinensis HOM05D002452 ORTHO05D006766 1.4e-72 277.7 315 52.1
GSVIVG01014168001 Vitis vinifera HOM05D002452 ORTHO05D006766 7.1e-72 275.4 386 49.5
MD11G1266100 Malus domestica HOM05D002452 ORTHO05D006766 1.6e-71 274.2 376 50.5
Gohir.D01G040900 Gossypium hirsutum HOM05D002452 ORTHO05D006766 1.0e-70 271.6 378 47.1
Sed0025986 Sechium edule HOM05D002452 ORTHO05D006766 1.7e-70 270.8 385 50.1
RcHm_v2.0_Chr5g0030441 Rosa chinensis HOM05D002452 ORTHO05D006766 2.3e-70 270.4 411 46.5
RcHm_v2.0_Chr5g0030521 Rosa chinensis HOM05D002452 ORTHO05D006766 3.0e-70 270.0 414 46.4
CsaV3_4G033030 Cucumis sativus L. HOM05D002452 ORTHO05D006766 8.6e-70 268.5 382 51.3
FAN11G1668 Fragaria x ananassa HOM05D003130 ORTHO05D003547 5.6e-69 265.8 415 46.5
Gorai.002G051000 Gossypium raimondii HOM05D002452 ORTHO05D006766 5.6e-69 265.8 378 46.6
Cc05_g10930 Coffea canephora HOM05D002452 ORTHO05D006766 9.5e-69 265.0 377 48.5
FvH4_3g18120 Fragaria vesca HOM05D002452 ORTHO05D006766 1.6e-68 264.2 415 46.5
ClCG11G017390 Citrullus lanatus HOM05D002452 ORTHO05D006766 2.8e-68 263.5 402 48.0
Glyma.12G231200 Glycine max HOM05D002452 ORTHO05D006766 3.6e-68 263.1 377 47.5
FAN16G1664 Fragaria x ananassa HOM05D002452 ORTHO05D006766 4.7e-68 262.7 414 46.1
CANSAT35G1635 Cannabis sativa HOM05D002452 ORTHO05D006766 2.3e-67 260.4 398 45.7
arahy.Tifrunner.gnm1.ann1.69X35Q Arachis hypogaea HOM05D002452 ORTHO05D006766 1.2e-66 258.1 376 46.8
MELO3C025646.2 Cucumis melo HOM05D002452 ORTHO05D006766 1.5e-66 257.7 381 48.3
Psat0s2485g0160 Pisum sativum HOM05D002452 ORTHO05D006766 3.4e-66 256.5 379 47.2
Lj3g0025969 Lotus japonicus HOM05D002452 ORTHO05D006766 8.3e-65 251.9 379 44.9
TPR.G16056 Trifolium pratense HOM05D002452 ORTHO05D006766 1.1e-64 251.5 376 48.4
Gohir.A01G051100 Gossypium hirsutum HOM05D002452 ORTHO05D006766 7.1e-64 248.8 373 45.6
Eucgr.F01252 Eucalyptus grandis HOM05D002452 ORTHO05D006766 1.6e-63 247.7 373 45.0
Lalb_Chr20g0109181 Lupinus albus HOM05D002452 ORTHO05D006766 1.6e-63 247.7 374 45.2
THA.LOC104808089 Tarenaya hassleriana HOM05D002452 ORTHO05D006766 1.6e-63 247.7 375 48.0
PGR083G1533 Punica granatum HOM05D002452 ORTHO05D006766 2.1e-63 247.3 375 46.7
Sc03g0010610 Simmondsia chinensis HOM05D002452 ORTHO05D006766 3.5e-63 246.5 375 47.7
SalBow8G0660 Salvia bowleyana HOM05D002452 ORTHO05D006766 2.3e-62 243.8 375 45.3
SalBow1G0777 Salvia bowleyana HOM05D002452 ORTHO05D006766 3.0e-62 243.4 375 45.3
arahy.Tifrunner.gnm1.ann1.T9SFGX Arachis hypogaea HOM05D002452 ORTHO05D006766 1.1e-61 241.5 381 44.6
Nitab4.5_0000383g0070 Nicotiana tabacum HOM05D002452 ORTHO05D006766 5.6e-61 239.2 374 44.4
MSTRG.14972 Avicennia marina HOM05D002452 ORTHO05D006766 2.8e-60 236.9 387 44.2
DCAR_013269 Daucus carota HOM05D002452 ORTHO05D006766 4.7e-60 236.1 422 44.1
TAR636G0392 Trochodendron aralioides HOM05D001914 ORTHO05D006766 1.1e-59 235.0 401 42.1
Phvul.005G080800 Phaseolus vulgaris HOM05D002452 ORTHO05D006766 2.4e-59 233.8 383 42.3
AUR62037577 Chenopodium quinoa HOM05D002452 ORTHO05D006766 5.2e-59 232.6 384 46.4
Oeu025328.2 Olea europaea HOM05D002452 ORTHO05D006766 5.2e-59 232.6 382 44.0
AUR62019605 Chenopodium quinoa HOM05D002452 ORTHO05D006766 6.8e-59 232.3 383 44.6
Aa31LG4G2320 Aethionema arabicum HOM05D002452 ORTHO05D006766 8.9e-59 231.9 380 42.1
Aqoxy1G01990 Aquilegia oxysepala HOM05D002452 ORTHO05D006766 5.8e-58 229.2 386 44.0
Ca_03951_v3 Cicer arietinum L. HOM05D002452 ORTHO05D006766 2.2e-57 227.3 387 44.4
Lalb_Chr25g0285731 Lupinus albus HOM05D002452 ORTHO05D006766 4.9e-57 226.1 375 42.7
Medtr2g075820 Medicago truncatula HOM05D002452 ORTHO05D006766 4.9e-57 226.1 379 44.6
FAN25G3870 Fragaria x ananassa HOM05D003130 ORTHO05D003547 1.9e-56 224.2 425 42.4
Migut.M00711 Erythranthe guttata HOM05D002452 ORTHO05D006766 3.2e-56 223.4 387 43.4
SGA_v2.0_scaffold181G39753 Striga asiatica HOM05D002452 ORTHO05D006766 2.7e-55 220.3 382 41.9
VMungo1080G0044 Vigna mungo HOM05D002452 ORTHO05D006766 7.8e-55 218.8 374 42.2
SGA_v2.0_scaffold73G24396 Striga asiatica HOM05D002452 ORTHO05D006766 2.3e-54 217.2 383 40.7
PSO541G2585 Papaver somniferum HOM05D002452 ORTHO05D006766 3.9e-54 216.5 373 42.4
Thhalv10018425m.g Eutrema salsugineum HOM05D002452 ORTHO05D006766 8.7e-54 215.3 379 41.7
Sopen10g003230 Solanum pennellii HOM05D002452 ORTHO05D006766 8.7e-54 215.3 396 42.4
Eucgr.F01259 Eucalyptus grandis HOM05D002452 ORTHO05D006766 1.1e-53 214.9 373 42.9
EL10Ac4g08382 Beta vulgaris HOM05D002452 ORTHO05D006766 2.5e-53 213.8 380 41.8
Sp5g33730 Schrenkiella parvula HOM05D002452 ORTHO05D006766 3.3e-53 213.4 392 38.8
HanXRQChr15g0495181 Helianthus annuus HOM05D002452 ORTHO05D006766 9.6e-53 211.8 392 41.1
Peaxi162Scf00692g00318 Petunia axillaris HOM05D002452 ORTHO05D006766 1.3e-52 211.5 375 42.9
Solyc10g007400.4 Solanum lycopersicum HOM05D002452 ORTHO05D006766 6.2e-52 209.1 396 42.2
AT1G78650 Arabidopsis thaliana HOM05D002452 ORTHO05D006766 1.1e-51 208.4 383 39.2
Hund10543 Selenicereus undatus HOM05D002452 ORTHO05D006766 2.4e-51 207.2 396 39.6
Ah.04g164150 Amaranthus hybridus HOM05D003130 ORTHO05D003547 3.1e-51 206.8 401 42.1
AL2G39060 Arabidopsis lyrata HOM05D002452 ORTHO05D006766 3.1e-51 206.8 379 37.5
PSO675G8136 Papaver somniferum HOM05D002452 ORTHO05D006766 6.9e-51 205.7 375 40.8
Lsat_1_v5_gn_7_102200 Lactuca sativa HOM05D002452 ORTHO05D006766 9.0e-51 205.3 384 44.0
CARHR072180 Cardamine hirsuta HOM05D002452 ORTHO05D006766 1.5e-50 204.5 379 37.7
RcHm_v2.0_Chr5g0030351 Rosa chinensis HOM05D002452 ORTHO05D006766 1.7e-49 201.1 369 43.4
Carub.0002s2550 Capsella rubella HOM05D002452 ORTHO05D006766 1.9e-48 197.6 385 38.4
PGSC0003DMG400021257 Solanum tuberosum HOM05D002452 ORTHO05D006766 3.2e-48 196.8 422 39.6
MD03G1244600 Malus domestica HOM05D002452 ORTHO05D006766 5.4e-48 196.1 230 53.5
CAN.G904.34 Capsicum annuum HOM05D002452 ORTHO05D006766 9.3e-48 195.3 385 42.3
RcHm_v2.0_Chr5g0030181 Rosa chinensis HOM05D002452 ORTHO05D006766 3.5e-47 193.4 370 43.0
A07p43910 Brassica napus HOM05D002452 ORTHO05D006766 7.3e-45 185.7 376 38.6
BraA07t31897Z Brassica rapa HOM05D002452 ORTHO05D006766 7.3e-45 185.7 376 38.6
BcaC08g47423 Brassica carinata HOM05D002452 ORTHO05D006766 1.4e-43 181.4 382 38.5
C06p52530 Brassica napus HOM05D002452 ORTHO05D006585 1.4e-43 181.4 382 38.5
BolC6t40272H Brassica oleracea HOM05D002452 ORTHO05D006585 1.4e-43 181.4 382 38.5
Zm00001eb120810 Zea mays HOM05D002452 ORTHO05D006766 1.5e-42 177.9 378 37.6
ECA236G2857 Erigeron canadensis HOM05D002452 ORTHO05D006766 7.6e-42 175.6 386 36.8
Eucgr.F01317 Eucalyptus grandis HOM05D002452 ORTHO05D006766 4.9e-41 172.9 211 45.5
BcaC08g47422 Brassica carinata HOM05D002452 ORTHO05D006766 1.4e-40 171.4 376 36.7
Zm00001eb338160 Zea mays HOM05D002452 ORTHO05D006766 9.3e-40 168.7 382 35.9
HPP92_024061 Vanilla planifolia HOM05D002452 ORTHO05D006766 3.5e-39 166.8 399 37.3
PSO541G6050 Papaver somniferum HOM05D002452 ORTHO05D006766 8.7e-38 162.2 245 42.4
CDE04G3284 Ceratophyllum demersum HOM05D002452 ORTHO05D006766 9.6e-37 158.7 394 37.1
Glyma.13G268300 Glycine max HOM05D002452 ORTHO05D006766 9.6e-37 158.7 205 46.8
Os01g0204000 Oryza sativa ssp. japonica HOM05D002452 ORTHO05D006766 2.5e-32 144.1 389 37.0
SEGI_19501 Sequoiadendron giganteum HOM05D002452 ORTHO05D006766 5.5e-32 142.9 411 34.5
Zm00001eb317290 Zea mays HOM05D002452 ORTHO05D006766 7.1e-32 142.5 264 37.9
ATR0012G041 Amborella trichopoda HOM05D002452 ORTHO05D006766 1.1e-29 135.2 381 33.1
Eucgr.F01264 Eucalyptus grandis HOM05D002452 ORTHO05D006766 3.8e-25 120.2 346 35.3
Pp3c27_7450 Physcomitrium patens HOM05D002452 ORTHO05D006766 1.8e-19 101.3 406 32.3
Zm00001eb370750 Zea mays HOM05D002452 ORTHO05D006766 4.1e-19 100.1 228 35.5
AagrBONN_evm.TU.Sc2ySwM_368.2647 Anthoceros agrestis HOM05D002452 ORTHO05D006766 5.1e-14 83.2 405 26.7
CBR_g36415 Chara braunii HOM05D002452 ORTHO05D006766 1.1e-13 82.0 92 44.6
Zm00001eb309500 Zea mays HOM05D002452 ORTHO05D006766 1.1e-13 82.0 71 54.9
SMO172G0197 Selaginella moellendorffii HOM05D000586 ORTHO05D003356 2.0e-13 81.3 217 34.1
Zm00001eb137460 Zea mays HOM05D002452 ORTHO05D006766 7.4e-13 79.3 327 29.7
SpUn0074_0010 Schrenkiella parvula HOM05D002452 ORTHO05D006766 9.7e-13 79.0 171 37.4
Zm00001eb409150 Zea mays HOM05D002452 ORTHO05D006766 9.7e-13 79.0 218 31.7
Zm00001eb002150 Zea mays HOM05D002452 ORTHO05D006766 1.3e-12 78.6 214 36.0
Mapoly0011s0137 Marchantia polymorpha HOM05D002452 ORTHO05D006766 7.7e-10 69.3 409 26.2
MD03G1244500 Malus domestica HOM05D002452 ORTHO05D006766 3.2e-08 63.9 101 44.6
Zm00001eb017750 Zea mays HOM05D002452 ORTHO05D006766 4.2e-08 63.5 99 44.4
Zm00001eb038850 Zea mays HOM05D002452 ORTHO05D006766 4.2e-08 63.5 99 44.4
Zm00001eb100520 Zea mays HOM05D002452 ORTHO05D006766 4.2e-08 63.5 99 44.4
Zm00001eb188790 Zea mays HOM05D002452 ORTHO05D006766 4.2e-08 63.5 99 44.4
Zm00001eb309510 Zea mays HOM05D002452 ORTHO05D006766 4.2e-08 63.5 96 42.7
Zm00001eb319080 Zea mays HOM05D002452 ORTHO05D006766 4.2e-08 63.5 99 44.4
Zm00001eb343810 Zea mays HOM05D002452 ORTHO05D006766 4.2e-08 63.5 99 44.4
Zm00001eb024250 Zea mays HOM05D002452 ORTHO05D006766 7.2e-08 62.8 197 31.5


User provided reference genes

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