Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc77.20 Carica papaya HOM05D008148 ORTHO05D010295 5.9e-47 190.7 105 100.0
Atru.chr2.2119 Acer truncatum HOM05D008148 ORTHO05D010295 5.9e-15 84.3 72 59.7
Eucgr.F03276 Eucalyptus grandis HOM05D008148 ORTHO05D010295 1.3e-14 83.2 73 61.6
CiPaw.11G159800 Carya illinoinensis HOM05D008148 ORTHO05D010295 8.5e-14 80.5 71 59.2
Manes.15G095500 Manihot esculenta HOM05D008148 ORTHO05D010295 8.5e-14 80.5 68 61.8
Actinidia12583 Actinidia chinensis HOM05D008148 ORTHO05D010295 1.5e-13 79.7 74 55.4
Potri.011G109100 Populus trichocarpa HOM05D008148 ORTHO05D010295 5.5e-13 77.8 69 60.9
CsaV3_4G032950 Cucumis sativus L. HOM05D008148 ORTHO05D010295 7.2e-13 77.4 72 58.3
Sabra11G0096700 Salix brachista HOM05D008148 ORTHO05D010295 1.6e-12 76.3 73 60.3
PGR031G2401 Punica granatum HOM05D008148 ORTHO05D010295 2.1e-12 75.9 44 77.3
arahy.Tifrunner.gnm1.ann1.MJJR0W Arachis hypogaea HOM05D008148 ORTHO05D010295 2.7e-12 75.5 76 52.6
TPR.G16053 Trifolium pratense HOM05D008148 ORTHO05D010295 4.7e-12 74.7 74 51.4
MELO3C025654.2 Cucumis melo HOM05D008148 ORTHO05D010295 6.1e-12 74.3 72 55.6
Duzib213G0597 Durio zibethinus HOM05D008148 ORTHO05D010295 6.1e-12 74.3 72 56.9
arahy.Tifrunner.gnm1.ann1.GBF3HF Arachis hypogaea HOM05D008148 ORTHO05D010295 8.0e-12 73.9 75 56.0
Thecc.07G117800 Theobroma cacao HOM05D008148 ORTHO05D010295 8.0e-12 73.9 72 54.2
Ca_03959_v3 Cicer arietinum L. HOM05D008148 ORTHO05D010295 1.0e-11 73.6 72 55.6
ClCG11G017320 Citrullus lanatus HOM05D008148 ORTHO05D010295 1.0e-11 73.6 72 55.6
Sc03g0010550 Simmondsia chinensis HOM05D008148 ORTHO05D010295 1.0e-11 73.6 65 55.4
Lalb_Chr25g0285821 Lupinus albus HOM05D008148 ORTHO05D010295 1.8e-11 72.8 72 52.8
Medtr2g076020 Medicago truncatula HOM05D008148 ORTHO05D010295 1.8e-11 72.8 73 52.1
RcHm_v2.0_Chr5g0030781 Rosa chinensis HOM05D008148 ORTHO05D010295 2.3e-11 72.4 66 53.0
Sed0019666 Sechium edule HOM05D008148 ORTHO05D010295 3.0e-11 72.0 46 67.4
Gohir.A01G053800 Gossypium hirsutum HOM05D008148 ORTHO05D010295 4.0e-11 71.6 72 54.2
Prupe.4G164100 Prunus persica HOM05D008148 ORTHO05D010295 5.2e-11 71.2 46 69.6
FAN11G2091 Fragaria x ananassa HOM05D008148 ORTHO05D010295 6.8e-11 70.9 68 54.4
Glyma.12G230300 Glycine max HOM05D008148 ORTHO05D010295 6.8e-11 70.9 72 54.2
Psat5g237240 Pisum sativum HOM05D008148 ORTHO05D010295 6.8e-11 70.9 73 52.1
Gohir.D01G042712 Gossypium hirsutum HOM05D008148 ORTHO05D010295 1.2e-10 70.1 46 69.6
Gorai.002G054100 Gossypium raimondii HOM05D008148 ORTHO05D010295 1.2e-10 70.1 46 69.6
CSS0001630 Camellia sinensis var. sinensis HOM05D008148 ORTHO05D010295 1.5e-10 69.7 46 69.6
MD11G1264400 Malus domestica HOM05D008148 ORTHO05D010295 2.0e-10 69.3 46 67.4
BraA09t41440Z Brassica rapa HOM05D008148 ORTHO05D010295 2.6e-10 68.9 65 52.3
Thhalv10009282m.g Eutrema salsugineum HOM05D008148 ORTHO05D010295 3.4e-10 68.6 65 55.4
AL1G29090 Arabidopsis lyrata HOM05D008148 ORTHO05D010295 4.4e-10 68.2 66 51.5
COL.COLO4_17536 Corchorus olitorius HOM05D008148 ORTHO05D010295 5.7e-10 67.8 72 50.0
Glyma.13G269300 Glycine max HOM05D008148 ORTHO05D010295 5.7e-10 67.8 72 54.2
Prupe.4G163600 Prunus persica HOM05D008148 ORTHO05D010295 5.7e-10 67.8 46 67.4
THA.LOC104812318 Tarenaya hassleriana HOM05D008148 ORTHO05D010295 5.7e-10 67.8 68 54.4
A09p60700 Brassica napus HOM05D008148 ORTHO05D010295 9.8e-10 67.0 65 52.3
FAN21G2680 Fragaria x ananassa HOM05D008148 ORTHO05D010295 9.8e-10 67.0 68 52.9
Sp1g15050 Schrenkiella parvula HOM05D008148 ORTHO05D010295 9.8e-10 67.0 65 53.8
Carub.0001s1665 Capsella rubella HOM05D008148 ORTHO05D010295 1.3e-09 66.6 65 49.2
C08p44200 Brassica napus HOM05D008148 ORTHO05D010295 2.2e-09 65.9 65 50.8
GSVIVG01014187001 Vitis vinifera HOM05D008148 ORTHO05D010295 2.2e-09 65.9 44 68.2
AT1G16916 Arabidopsis thaliana HOM05D008148 ORTHO05D010295 2.8e-09 65.5 84 45.2
Lj3g0020996 Lotus japonicus HOM05D008148 ORTHO05D010295 4.9e-09 64.7 72 47.2
CARHR017420 Cardamine hirsuta HOM05D008148 ORTHO05D010295 1.1e-08 63.5 65 50.8
BcaC07g41389 Brassica carinata HOM05D008148 ORTHO05D010295 1.8e-08 62.8 65 52.3
DCAR_013159 Daucus carota HOM05D008148 ORTHO05D010295 7.0e-08 60.8 40 70.0
Oeu059259.1 Olea europaea HOM05D008148 ORTHO05D010295 7.0e-08 60.8 71 57.7
Phvul.005G081700 Phaseolus vulgaris HOM05D008148 ORTHO05D010295 1.2e-07 60.1 42 59.5
FAN25G0037 Fragaria x ananassa HOM05D008148 ORTHO05D010295 1.6e-07 59.7 71 49.3
Cc05_g11020 Coffea canephora HOM05D008148 ORTHO05D010295 2.0e-07 59.3 45 66.7
SalBow6G6640 Salvia bowleyana HOM05D008148 ORTHO05D010295 2.0e-07 59.3 94 43.6
SalBow7G3203 Salvia bowleyana HOM05D008148 ORTHO05D010295 1.0e-06 57.0 71 49.3
Migut.M00719 Erythranthe guttata HOM05D008148 ORTHO05D010295 1.3e-06 56.6 47 63.8
Atru.chr1.2298 Acer truncatum HOM05D008148 ORTHO05D010295 8.6e-06 53.9 61 45.9


User provided reference genes

Program Settings