Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc768.4 Carica papaya HOM05D005366 ORTHO05D006323 7.7e-163 577.8 308 100.0
Thecc.09G008500 Theobroma cacao HOM05D005366 ORTHO05D006323 1.4e-34 151.8 254 39.4
Ciclev10007223m.g Citrus clementina HOM05D005366 ORTHO05D006323 1.8e-34 151.4 348 34.2
COL.COLO4_19020 Corchorus olitorius HOM05D005366 ORTHO05D006323 1.2e-33 148.7 163 50.9
Gohir.D07G002400 Gossypium hirsutum HOM05D005366 ORTHO05D006323 2.2e-32 144.4 163 50.3
Gohir.A07G002100 Gossypium hirsutum HOM05D005366 ORTHO05D006323 2.9e-32 144.1 163 49.7
Duzib168G0091 Durio zibethinus HOM05D005366 ORTHO05D006323 8.3e-32 142.5 163 49.7
Gorai.001G002300 Gossypium raimondii HOM05D005366 ORTHO05D006323 2.4e-31 141.0 163 49.1
TAR625G0579 Trochodendron aralioides HOM05D005366 ORTHO05D006323 7.8e-30 136.0 169 46.7
MD08G1126800 Malus domestica HOM05D005366 ORTHO05D006323 1.0e-29 135.6 162 48.1
AL343U10020 Arabidopsis lyrata HOM05D005366 ORTHO05D006323 1.3e-29 135.2 346 33.8
Haze_21759 Corylus avellana HOM05D005366 ORTHO05D006323 3.9e-29 133.7 351 31.9
TWI63G1827 Tripterygium wilfordii HOM05D005366 ORTHO05D006323 5.6e-28 129.8 180 39.4
RcHm_v2.0_Chr6g0305291 Rosa chinensis HOM05D005366 ORTHO05D006323 1.6e-27 128.3 306 35.3
Manes.16G134600 Manihot esculenta HOM05D005366 ORTHO05D006323 6.2e-27 126.3 169 45.6
CANSAT25G3462 Cannabis sativa HOM05D005366 ORTHO05D006323 8.0e-27 125.9 281 35.2
Potri.018G008600 Populus trichocarpa HOM05D005366 ORTHO05D006323 8.0e-27 125.9 183 44.8
C01p07430 Brassica napus HOM05D005366 ORTHO05D006323 5.2e-26 123.2 344 32.3
Prupe.1G459000 Prunus persica HOM05D005366 ORTHO05D006323 2.2e-24 117.9 160 44.4
Hma1.2p1_0272F.1_g109220 Hydrangea macrophylla HOM05D005366 ORTHO05D006323 8.3e-24 115.9 218 38.1
Sed0008947 Sechium edule HOM05D005366 ORTHO05D006323 2.0e-22 111.3 307 30.0
Actinidia06431 Actinidia chinensis HOM05D005366 ORTHO05D006323 1.7e-21 108.2 172 38.4
MBI16_g05842_MAGBIO Magnolia biondii HOM05D005366 ORTHO05D006323 1.7e-21 108.2 162 39.5
QL12p025430 Quercus lobata HOM05D005366 ORTHO05D006323 8.6e-21 105.9 353 28.3
Aa31LG2G18730 Aethionema arabicum HOM05D005366 ORTHO05D006323 5.6e-20 103.2 327 30.6
Rhsim11G0005000 Rhododendron simsii HOM05D005366 ORTHO05D006323 5.6e-20 103.2 162 36.4
TPR.G12019 Trifolium pratense HOM05D005366 ORTHO05D006323 5.6e-20 103.2 253 31.6
AT4G31570 Arabidopsis thaliana HOM05D005366 ORTHO05D006323 9.5e-20 102.4 341 29.3
BcaC09g51938 Brassica carinata HOM05D005366 ORTHO05D006323 1.2e-19 102.1 304 30.3
MD15G1106500 Malus domestica HOM05D005366 ORTHO05D006323 3.1e-18 97.4 162 40.1
Lj7C748G6 Lonicera japonica HOM05D005366 ORTHO05D006323 4.0e-18 97.1 149 38.9
PSO063G0316 Papaver somniferum HOM05D005366 ORTHO05D006323 4.0e-18 97.1 162 37.0
Medtr1g009610 Medicago truncatula HOM05D005366 ORTHO05D006323 1.5e-17 95.1 250 31.6
MELO3C003621.2 Cucumis melo HOM05D005366 ORTHO05D006323 2.0e-17 94.7 304 26.6
CiPaw.07G211400 Carya illinoinensis HOM05D005366 ORTHO05D006323 9.9e-17 92.4 346 29.8
Carub.0007s0900 Capsella rubella HOM05D005366 ORTHO05D006323 2.9e-16 90.9 336 30.4
Sc06g0000200 Simmondsia chinensis HOM05D005366 ORTHO05D006323 2.9e-16 90.9 161 34.2
TPR.G21359 Trifolium pratense HOM05D005366 ORTHO05D006323 6.4e-16 89.7 253 28.9
Psat0s839g0040 Pisum sativum HOM05D005366 ORTHO05D006323 4.1e-15 87.0 204 30.9
COL.COLO4_30023 Corchorus olitorius HOM05D005366 ORTHO05D006323 2.7e-14 84.3 97 48.5
Dinv04518 Davidia involucrata HOM05D005366 ORTHO05D006323 7.8e-14 82.8 262 29.8
PSO170G4550 Papaver somniferum HOM05D005366 ORTHO05D006323 3.9e-13 80.5 162 33.3
GSVIVG01033179001 Vitis vinifera HOM05D005366 ORTHO05D006323 3.9e-13 80.5 226 31.0
Thhalv10024180m.g Eutrema salsugineum HOM05D005366 ORTHO05D006323 8.6e-13 79.3 302 30.1
AUR62037714 Chenopodium quinoa HOM05D005366 ORTHO05D006323 1.1e-12 79.0 163 33.7
Gohir.A05G063400 Gossypium hirsutum HOM05D005366 ORTHO05D006323 1.1e-12 79.0 88 45.5
Gorai.009G066800 Gossypium raimondii HOM05D005366 ORTHO05D006323 1.1e-12 79.0 85 45.9
MSTRG.25794 Avicennia marina HOM05D005366 ORTHO05D006323 1.5e-12 78.6 182 33.0
Gohir.D05G066000 Gossypium hirsutum HOM05D005366 ORTHO05D006323 1.5e-12 78.6 85 45.9
Nn8g40726 Nelumbo nucifera HOM05D005366 ORTHO05D006323 1.9e-12 78.2 194 31.4
Sp7g29400 Schrenkiella parvula HOM05D005366 ORTHO05D006323 2.5e-12 77.8 164 35.4
DCAR_000688 Daucus carota HOM05D005366 ORTHO05D006323 3.3e-12 77.4 155 32.3
CARHR239450 Cardamine hirsuta HOM05D005366 ORTHO05D006323 2.8e-11 74.3 269 28.3
AUR62020289 Chenopodium quinoa HOM05D005366 ORTHO05D006323 2.8e-11 74.3 163 33.7
Ca_01524_v3 Cicer arietinum L. HOM05D005366 ORTHO05D006323 2.8e-11 74.3 212 28.8
BolC1t00725H Brassica oleracea HOM05D005366 ORTHO05D006323 4.7e-11 73.6 344 27.6
Lalb_Chr22g0361211 Lupinus albus HOM05D005366 ORTHO05D006323 8.1e-11 72.8 139 33.1
Cc08_g06500 Coffea canephora HOM05D005366 ORTHO05D006323 8.9e-10 69.3 299 24.1
THA.LOC104803624 Tarenaya hassleriana HOM05D005366 ORTHO05D006323 1.5e-09 68.6 241 29.5
Ah.12g061220 Amaranthus hybridus HOM05D005366 ORTHO05D006323 5.8e-09 66.6 161 32.3
BolC7t46324H Brassica oleracea HOM05D005366 ORTHO05D006323 4.9e-08 63.5 322 26.4
BcaNung01513 Brassica carinata HOM05D005366 ORTHO05D006323 1.1e-07 62.4 322 26.1
C07p58760 Brassica napus HOM05D005366 ORTHO05D006323 1.9e-07 61.6 322 26.1
Aqoxy7G02854 Aquilegia oxysepala HOM05D005366 ORTHO05D006323 2.4e-07 61.2 85 37.6
Psat3g095480 Pisum sativum HOM05D005366 ORTHO05D006323 7.1e-07 59.7 222 29.3
Lsat_1_v5_gn_5_61021 Lactuca sativa HOM05D005366 ORTHO05D006323 9.2e-07 59.3 111 31.5
Nitab4.5_0000555g0160 Nicotiana tabacum HOM05D005366 ORTHO05D006323 2.1e-06 58.2 138 29.7
A03p60870 Brassica napus HOM05D005366 ORTHO05D006323 2.7e-06 57.8 179 29.6
BraA03t15125Z Brassica rapa HOM05D005366 ORTHO05D006323 2.7e-06 57.8 179 29.6
BcaNung04128 Brassica carinata HOM05D005366 ORTHO05D006323 3.5e-06 57.4 287 24.7
ATR0580G014 Amborella trichopoda HOM05D005366 ORTHO05D006323 4.6e-06 57.0 119 32.8


User provided reference genes

Program Settings