Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc76.25 Carica papaya HOM05D006685 ORTHO05D008244 3.8e-249 864.4 436 100.0
Cfa004216 Carpinus fangiana HOM05D006685 ORTHO05D008244 1.2e-106 391.0 414 51.9
QL06p043714 Quercus lobata HOM05D006685 ORTHO05D008244 3.7e-103 379.4 442 47.7
Sabra05G0107200 Salix brachista HOM05D006685 ORTHO05D008244 1.2e-98 364.4 433 46.9
RcHm_v2.0_Chr1g0329901 Rosa chinensis HOM05D006685 ORTHO05D008244 1.3e-95 354.4 409 47.9
Lj7A17G42 Lonicera japonica HOM05D006685 ORTHO05D008244 1.7e-95 354.0 437 43.9
Potri.005G133500 Populus trichocarpa HOM05D006685 ORTHO05D008244 1.1e-94 351.3 433 46.0
RcHm_v2.0_Chr2g0103811 Rosa chinensis HOM05D006685 ORTHO05D008244 1.4e-94 350.9 428 46.5
Lj7A20T60 Lonicera japonica HOM05D006685 ORTHO05D008244 4.1e-94 349.4 415 45.1
CSS0018173 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 5.9e-93 345.5 412 47.1
MD15G1276100 Malus domestica HOM05D006685 ORTHO05D008244 7.7e-93 345.1 409 47.9
FAN28G0684 Fragaria x ananassa HOM05D006685 ORTHO05D008244 1.7e-92 344.0 436 44.5
Dinv26751 Davidia involucrata HOM05D006685 ORTHO05D008244 3.8e-92 342.8 417 46.8
FAN23G0082 Fragaria x ananassa HOM05D006685 ORTHO05D008244 3.8e-92 342.8 429 44.3
FvH4_1g14850 Fragaria vesca HOM05D006685 ORTHO05D008244 6.5e-92 342.0 409 46.2
Atru.chr3.446 Acer truncatum HOM05D006685 ORTHO05D008244 8.5e-92 341.7 436 44.7
FAN28G1646 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.1e-90 337.0 436 43.8
Hma1.2p1_0546F.1_g176210 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 2.1e-90 337.0 408 46.8
Ciclev10025347m.g Citrus clementina HOM05D006685 ORTHO05D008244 6.1e-90 335.5 409 45.7
FAN26G3106 Fragaria x ananassa HOM05D006685 ORTHO05D008244 8.0e-90 335.1 436 43.6
Manes.13G130000 Manihot esculenta HOM05D006685 ORTHO05D008244 3.4e-88 329.7 435 44.4
Duzib187G0300 Durio zibethinus HOM05D006685 ORTHO05D008244 5.7e-88 328.9 406 44.3
CiPaw.02G011900 Carya illinoinensis HOM05D006685 ORTHO05D008244 2.9e-84 316.6 422 43.1
Thecc.01G048300 Theobroma cacao HOM05D006685 ORTHO05D008244 6.6e-84 315.5 408 44.4
Actinidia36520 Actinidia chinensis HOM05D006685 ORTHO05D008244 8.6e-84 315.1 420 44.5
COL.COLO4_11329 Corchorus olitorius HOM05D006685 ORTHO05D008244 3.6e-82 309.7 404 42.6
TAR376G1120 Trochodendron aralioides HOM05D006685 ORTHO05D008244 8.9e-81 305.1 448 41.5
CANSAT01G2373 Cannabis sativa HOM05D006685 ORTHO05D008244 1.7e-79 300.8 411 42.6
Gohir.A12G068800 Gossypium hirsutum HOM05D006685 ORTHO05D008244 3.7e-79 299.7 406 43.1
Gohir.D12G090400 Gossypium hirsutum HOM05D006685 ORTHO05D008244 7.0e-78 295.4 406 42.9
Lalb_Chr16g0388451 Lupinus albus HOM05D006685 ORTHO05D008244 7.0e-78 295.4 418 43.3
Gorai.008G072600 Gossypium raimondii HOM05D006685 ORTHO05D008244 9.2e-78 295.0 406 42.9
VMungo0251G1647 Vigna mungo HOM05D006685 ORTHO05D008244 1.6e-77 294.3 415 41.4
Phvul.003G248400 Phaseolus vulgaris HOM05D006685 ORTHO05D008244 2.7e-77 293.5 414 40.3
DCAR_025691 Daucus carota HOM05D006685 ORTHO05D008244 1.3e-76 291.2 419 39.4
Prupe.7G141900 Prunus persica HOM05D006685 ORTHO05D008244 1.3e-76 291.2 373 45.0
Hma1.2p1_0546F.1_g176200 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 2.3e-76 290.4 414 42.0
Nn5g29383 Nelumbo nucifera HOM05D006685 ORTHO05D008244 6.6e-76 288.9 417 41.7
vmacro05297 Vaccinium macrocarpon HOM05D006685 ORTHO05D008244 7.3e-75 285.4 400 42.0
Hund16306 Selenicereus undatus HOM05D006685 ORTHO05D008244 9.5e-75 285.0 414 42.5
Lj4g0023849 Lotus japonicus HOM05D006685 ORTHO05D008244 4.7e-74 282.7 413 38.5
Ca_22212_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 3.1e-73 280.0 413 38.7
Ca_22230_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 3.1e-73 280.0 413 38.7
Medtr8g079100 Medicago truncatula HOM05D006685 ORTHO05D008244 4.0e-73 279.6 409 39.6
Sp5g11730 Schrenkiella parvula HOM05D006685 ORTHO05D008244 4.4e-72 276.2 406 41.1
AL5G30586 Arabidopsis lyrata HOM05D006685 ORTHO05D008244 9.8e-72 275.0 406 38.4
Glyma.02G062800 Glycine max HOM05D006685 ORTHO05D008244 1.3e-71 274.6 416 39.9
A01p24130 Brassica napus HOM05D006685 ORTHO05D008244 1.1e-70 271.6 405 38.5
BraA01t02325Z Brassica rapa HOM05D006685 ORTHO05D008244 1.1e-70 271.6 405 38.5
ClCG02G012840 Citrullus lanatus HOM05D006685 ORTHO05D008244 1.1e-70 271.6 414 42.3
Psat4g089520 Pisum sativum HOM05D006685 ORTHO05D008244 1.1e-70 271.6 413 38.3
BcaB05g23218 Brassica carinata HOM05D006685 ORTHO05D008244 2.4e-70 270.4 421 37.8
AT3G50430 Arabidopsis thaliana HOM05D006685 ORTHO05D008244 3.2e-70 270.0 407 38.6
TPR.G30340 Trifolium pratense HOM05D006685 ORTHO05D008244 3.2e-70 270.0 416 38.5
Sed0001332 Sechium edule HOM05D006685 ORTHO05D008244 9.2e-70 268.5 423 39.7
C01p29820 Brassica napus HOM05D006685 ORTHO05D008244 1.2e-69 268.1 426 38.0
BolC1t02922H Brassica oleracea HOM05D006685 ORTHO05D008244 1.2e-69 268.1 426 38.0
BcaC09g50030 Brassica carinata HOM05D006685 ORTHO05D008244 2.0e-69 267.3 406 38.9
arahy.Tifrunner.gnm1.ann1.5EE2XW Arachis hypogaea HOM05D006685 ORTHO05D008244 6.0e-69 265.8 401 40.6
CARHR159940 Cardamine hirsuta HOM05D006685 ORTHO05D008244 6.0e-69 265.8 404 38.1
Thhalv10010194m.g Eutrema salsugineum HOM05D006685 ORTHO05D008244 1.7e-68 264.2 409 39.6
Aqoxy6G00915 Aquilegia oxysepala HOM05D006685 ORTHO05D008244 1.5e-67 261.2 404 39.6
Nitab4.5_0000108g0340 Nicotiana tabacum HOM05D006685 ORTHO05D008244 1.9e-67 260.8 427 37.2
CsaV3_2G016900 Cucumis sativus L. HOM05D006685 ORTHO05D008244 2.5e-67 260.4 412 41.3
MELO3C020890.2 Cucumis melo HOM05D006685 ORTHO05D008244 4.3e-67 259.6 412 40.0
Aa31LG4G18660 Aethionema arabicum HOM05D006685 ORTHO05D008244 9.5e-67 258.5 432 36.6
THA.LOC104821263 Tarenaya hassleriana HOM05D006685 ORTHO05D008244 1.6e-66 257.7 429 38.0
Nitab4.5_0001014g0040 Nicotiana tabacum HOM05D006685 ORTHO05D008244 2.8e-66 256.9 427 36.1
Peaxi162Scf00993g00018 Petunia axillaris HOM05D006685 ORTHO05D008244 5.2e-65 252.7 385 39.5
Sc03g0001280 Simmondsia chinensis HOM05D006685 ORTHO05D008244 5.2e-65 252.7 436 38.3
PGSC0003DMG402010073 Solanum tuberosum HOM05D006685 ORTHO05D008244 2.6e-64 250.4 441 36.1
MBI16_g19900_MAGBIO Magnolia biondii HOM05D006685 ORTHO05D008244 3.7e-63 246.5 424 37.5
Solyc02g090260.3 Solanum lycopersicum HOM05D006685 ORTHO05D008244 4.9e-63 246.1 441 34.7
Sopen02g034940 Solanum pennellii HOM05D006685 ORTHO05D008244 4.9e-63 246.1 441 34.9
Migut.H00483 Erythranthe guttata HOM05D006685 ORTHO05D008244 8.3e-63 245.4 427 37.0
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 8.3e-63 245.4 434 36.2
Cc07_g05580 Coffea canephora HOM05D006685 ORTHO05D008244 5.4e-62 242.7 428 36.7
PSO541G3044 Papaver somniferum HOM05D006685 ORTHO05D008244 5.4e-62 242.7 440 35.2
MD06G1092200 Malus domestica HOM05D006685 ORTHO05D008244 7.1e-62 242.3 324 46.0
CAN.G836.36 Capsicum annuum HOM05D006685 ORTHO05D008244 1.2e-61 241.5 412 35.0
Haze_15195 Corylus avellana HOM05D006685 ORTHO05D008244 2.8e-58 230.3 251 51.0
SGA_v2.0_scaffold204G41611 Striga asiatica HOM05D006685 ORTHO05D008244 9.9e-56 221.9 428 35.0
Eucgr.I01015 Eucalyptus grandis HOM05D006685 ORTHO05D008244 7.1e-54 215.7 390 37.4
Carub.0005s1677 Capsella rubella HOM05D006685 ORTHO05D008244 1.3e-52 211.5 304 37.5
CSS0022206 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 9.6e-51 205.3 252 46.0
PGR119G2375 Punica granatum HOM05D006685 ORTHO05D008244 9.3e-46 188.7 413 34.4
HanXRQChr12g0378291 Helianthus annuus HOM05D006685 ORTHO05D008244 1.2e-45 188.3 409 32.8
ECA246G1174 Erigeron canadensis HOM05D006685 ORTHO05D008244 3.1e-41 173.7 346 35.8
ATR0733G107 Amborella trichopoda HOM05D006685 ORTHO05D008244 1.7e-39 167.9 416 29.6
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 7.1e-38 162.5 367 33.0
HPP92_017771 Vanilla planifolia HOM05D006685 ORTHO05D008244 2.5e-35 154.1 423 31.0
Lsat_1_v5_gn_3_92360 Lactuca sativa HOM05D006685 ORTHO05D008244 7.3e-35 152.5 398 30.4
AUR62001974 Chenopodium quinoa HOM05D006685 ORTHO05D008244 9.6e-35 152.1 327 31.8
AUR62003829 Chenopodium quinoa HOM05D006685 ORTHO05D008244 2.1e-34 151.0 227 36.6
PGR044G2727 Punica granatum HOM05D006685 ORTHO05D008244 4.5e-32 143.3 230 39.1
Zm00001eb209640 Zea mays HOM05D006685 ORTHO05D008244 4.5e-32 143.3 408 30.4
Zm00001eb209650 Zea mays HOM05D006685 ORTHO05D008244 4.5e-32 143.3 408 30.4
GSVIVG01036190001 Vitis vinifera HOM05D006685 ORTHO05D008244 3.2e-30 137.1 168 44.6
Oeu003945.1 Olea europaea HOM05D006685 ORTHO05D008244 6.0e-29 132.9 161 40.4
Os07g0120700 Oryza sativa ssp. japonica HOM05D006685 ORTHO05D008244 2.1e-26 124.4 425 28.0
unitig_749.g14219 Utricularia gibba HOM05D006685 ORTHO05D008244 2.6e-16 90.9 182 34.1
SEGI_02281 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 1.4e-14 85.1 308 29.2
CDE07G1850 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 2.8e-10 70.9 147 29.9
SEGI_32623 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 2.8e-10 70.9 263 29.3
unitig_78.g29629 Utricularia gibba HOM05D006685 ORTHO05D008244 2.0e-08 64.7 89 44.9


User provided reference genes

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