Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc75.87 Carica papaya HOM05D008081 ORTHO05D010223 3.3e-214 748.0 361 100.0
COL.COLO4_34977 Corchorus olitorius HOM05D008081 ORTHO05D010223 5.6e-121 438.3 369 59.6
Duzib168G0460 Durio zibethinus HOM05D008081 ORTHO05D010223 3.6e-120 435.6 365 59.7
Thecc.09G118700 Theobroma cacao HOM05D008081 ORTHO05D010223 4.0e-119 432.2 368 59.8
Hma1.2p1_0018F.1_g012950 Hydrangea macrophylla HOM05D008081 ORTHO05D010223 3.5e-115 419.1 370 56.2
Manes.14G127800 Manihot esculenta HOM05D008081 ORTHO05D010223 9.5e-113 411.0 368 56.2
Nitab4.5_0000282g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 1.6e-112 410.2 368 55.7
Gohir.A06G059000 Gossypium hirsutum HOM05D008081 ORTHO05D010223 2.3e-111 406.4 363 57.9
Gorai.010G066900 Gossypium raimondii HOM05D008081 ORTHO05D010223 2.3e-111 406.4 363 57.6
DCAR_009223 Daucus carota HOM05D008081 ORTHO05D010223 3.1e-111 406.0 371 56.6
Ciclev10008639m.g Citrus clementina HOM05D008081 ORTHO05D010223 5.2e-111 405.2 368 56.5
Gohir.D06G057200 Gossypium hirsutum HOM05D008081 ORTHO05D010223 6.8e-111 404.8 363 57.3
Cc06_g09100 Coffea canephora HOM05D008081 ORTHO05D010223 4.4e-110 402.1 379 54.9
Atru.chr7.1264 Acer truncatum HOM05D008081 ORTHO05D010223 9.8e-110 401.0 379 54.9
Psat1g025520 Pisum sativum HOM05D008081 ORTHO05D010223 2.4e-108 396.4 365 57.8
QL02p086958 Quercus lobata HOM05D008081 ORTHO05D010223 9.2e-108 394.4 369 55.0
Glyma.06G213000 Glycine max HOM05D008081 ORTHO05D010223 3.5e-107 392.5 368 56.2
Medtr2g055250 Medicago truncatula HOM05D008081 ORTHO05D010223 1.3e-106 390.6 368 57.1
Aqoxy7G01970 Aquilegia oxysepala HOM05D008081 ORTHO05D010223 1.9e-105 386.7 365 54.5
Glyma.04G150400 Glycine max HOM05D008081 ORTHO05D010223 4.3e-105 385.6 366 56.3
CANSAT56G1336 Cannabis sativa HOM05D008081 ORTHO05D010223 7.3e-105 384.8 367 54.0
HanXRQChr10g0316871 Helianthus annuus HOM05D008081 ORTHO05D010223 9.5e-105 384.4 372 54.6
Sopen08g011800 Solanum pennellii HOM05D008081 ORTHO05D010223 2.8e-104 382.9 378 51.3
Solyc08g041700.1 Solanum lycopersicum HOM05D008081 ORTHO05D010223 8.1e-104 381.3 378 51.1
TWI34G1060 Tripterygium wilfordii HOM05D008081 ORTHO05D010223 8.1e-104 381.3 364 53.6
Ca_02616_v3 Cicer arietinum L. HOM05D008081 ORTHO05D010223 1.1e-103 380.9 366 56.8
Lj1g0011101 Lotus japonicus HOM05D008081 ORTHO05D010223 1.1e-103 380.9 376 54.8
ECA234G2703 Erigeron canadensis HOM05D008081 ORTHO05D010223 3.1e-103 379.4 374 53.2
PGSC0003DMG400015624 Solanum tuberosum HOM05D008081 ORTHO05D010223 5.2e-103 378.6 376 51.9
Lsat_1_v5_gn_5_98420 Lactuca sativa HOM05D008081 ORTHO05D010223 6.8e-103 378.3 370 52.7
Phvul.009G199400 Phaseolus vulgaris HOM05D008081 ORTHO05D010223 6.8e-103 378.3 367 56.7
Eucgr.L02382 Eucalyptus grandis HOM05D008081 ORTHO05D010223 2.0e-102 376.7 373 52.8
Nn2g11886 Nelumbo nucifera HOM05D008081 ORTHO05D010223 3.4e-102 375.9 367 54.2
Lalb_Chr01g0020971 Lupinus albus HOM05D008081 ORTHO05D010223 3.7e-101 372.5 366 53.3
PGR142G1327 Punica granatum HOM05D008081 ORTHO05D010223 6.4e-101 371.7 357 51.0
VMungo1309G1591 Vigna mungo HOM05D008081 ORTHO05D010223 6.4e-101 371.7 371 55.5
AL6G31500 Arabidopsis lyrata HOM05D008081 ORTHO05D010223 7.1e-100 368.2 372 50.5
CSS0001106 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 7.1e-100 368.2 326 57.7
Thhalv10013905m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 1.2e-99 367.5 371 51.5
Potri.018G071900 Populus trichocarpa HOM05D008081 ORTHO05D010223 1.2e-99 367.5 378 51.6
TAR383G0366 Trochodendron aralioides HOM05D008081 ORTHO05D010223 3.5e-99 365.9 355 55.2
CSS0008637 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 7.8e-99 364.8 326 57.7
Thhalv10013658m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 7.8e-99 364.8 371 51.2
CARHR192880 Cardamine hirsuta HOM05D008081 ORTHO05D010223 1.7e-98 363.6 371 49.1
AT5G19970 Arabidopsis thaliana HOM05D008081 ORTHO05D010223 1.9e-97 360.1 372 50.0
PSO765G0202 Papaver somniferum HOM05D008081 ORTHO05D010223 1.9e-97 360.1 364 51.1
MBI04_g33811_MAGBIO Magnolia biondii HOM05D008081 ORTHO05D010223 7.3e-97 358.2 362 52.2
BNapus_Darmor_BZH_scaffold_38p01920 Brassica napus HOM05D008081 ORTHO05D010223 1.6e-96 357.1 370 50.3
BolC2t06998H Brassica oleracea HOM05D008081 ORTHO05D010223 1.6e-96 357.1 370 50.3
PSO349G0241 Papaver somniferum HOM05D008081 ORTHO05D010223 1.6e-96 357.1 366 51.6
A02p05940 Brassica napus HOM05D008081 ORTHO05D010223 2.1e-96 356.7 370 50.0
BraA02t05546Z Brassica rapa HOM05D008081 ORTHO05D010223 2.1e-96 356.7 370 50.0
Nitab4.5_0003085g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 6.2e-96 355.1 328 53.7
GSVIVG01015465001 Vitis vinifera HOM05D008081 ORTHO05D010223 4.0e-95 352.4 364 51.1
Sp6g24410 Schrenkiella parvula HOM05D008081 ORTHO05D010223 6.8e-95 351.7 372 49.7
Sabra18G0062600 Salix brachista HOM05D008081 ORTHO05D010223 2.0e-94 350.1 371 50.4
Carub.0006s1834 Capsella rubella HOM05D008081 ORTHO05D010223 2.6e-94 349.7 372 49.7
CSS0031360 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.1e-92 344.4 326 55.8
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 2.7e-91 339.7 358 47.8
Oeu032197.1 Olea europaea HOM05D008081 ORTHO05D010223 3.5e-91 339.3 364 48.6
Peaxi162Scf00292g00051 Petunia axillaris HOM05D008081 ORTHO05D010223 5.1e-90 335.5 307 55.4
Eucgr.C01103 Eucalyptus grandis HOM05D008081 ORTHO05D010223 8.1e-88 328.2 331 52.3
Actinidia09389 Actinidia chinensis HOM05D008081 ORTHO05D010223 4.4e-86 322.4 369 47.4
THA.LOC104815107 Tarenaya hassleriana HOM05D008081 ORTHO05D010223 8.4e-77 291.6 368 43.5
Zm00001eb158500 Zea mays HOM05D008081 ORTHO05D010223 2.7e-75 286.6 375 42.9
Os01g0647000 Oryza sativa ssp. japonica HOM05D008081 ORTHO05D010223 3.6e-72 276.2 367 44.1
CSS0020794 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.3e-66 257.7 350 43.4
Dinv36582 Davidia involucrata HOM05D008081 ORTHO05D010223 1.3e-66 257.7 269 50.9
ATR0083G076 Amborella trichopoda HOM05D008081 ORTHO05D010223 2.6e-62 243.4 353 38.0
TPR.G30892 Trifolium pratense HOM05D008081 ORTHO05D010223 1.6e-51 207.6 208 52.9
BcaB05g22890 Brassica carinata HOM05D008081 ORTHO05D010223 4.6e-51 206.1 246 44.7
BcaC03g13723 Brassica carinata HOM05D008081 ORTHO05D010223 3.1e-31 140.2 142 47.9


User provided reference genes

Program Settings