Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 3.9e-53 211.1 98 100.0
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 3.2e-39 164.9 96 74.0
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 7.2e-39 163.7 96 74.0
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 7.2e-39 163.7 96 74.0
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 7.2e-39 163.7 96 74.0
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 7.2e-39 163.7 96 74.0
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 1.2e-38 162.9 94 75.5
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 2.7e-38 161.8 96 70.8
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 3.6e-38 161.4 96 71.9
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 6.1e-38 160.6 96 69.8
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 1.8e-37 159.1 96 68.8
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 2.3e-37 158.7 96 68.8
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 5.1e-37 157.5 96 71.9
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 8.8e-37 156.8 98 70.4
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 1.1e-36 156.4 96 68.8
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 1.1e-36 156.4 96 70.8
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 1.5e-36 156.0 96 69.8
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 2.0e-36 155.6 96 69.8
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 2.0e-36 155.6 96 68.8
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 2.5e-36 155.2 96 68.8
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 5.7e-36 154.1 95 70.5
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 5.7e-36 154.1 92 71.7
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 5.7e-36 154.1 92 71.7
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 5.7e-36 154.1 92 71.7
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 9.7e-36 153.3 92 70.7
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 9.7e-36 153.3 96 68.8
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 1.7e-35 152.5 95 69.5
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 1.7e-35 152.5 95 68.4
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 2.2e-35 152.1 93 69.9
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 2.8e-35 151.8 92 71.7
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 3.7e-35 151.4 92 70.7
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 3.7e-35 151.4 91 71.4
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 3.7e-35 151.4 96 66.7
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 4.8e-35 151.0 95 70.5
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 6.3e-35 150.6 96 66.7
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 8.2e-35 150.2 92 70.7
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 8.2e-35 150.2 94 68.1
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 1.1e-34 149.8 96 64.6
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 1.4e-34 149.4 94 68.1
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 3.1e-34 148.3 98 64.3
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 4.1e-34 147.9 93 67.7
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 4.1e-34 147.9 98 66.3
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 4.1e-34 147.9 94 67.0
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 4.1e-34 147.9 92 69.6
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 4.1e-34 147.9 94 68.1
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 6.9e-34 147.1 92 66.3
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 1.2e-33 146.4 92 67.4
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 1.2e-33 146.4 94 67.0
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 2.0e-33 145.6 96 63.5
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 2.0e-33 145.6 91 67.0
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 3.4e-33 144.8 96 64.6
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 4.5e-33 144.4 97 62.9
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 7.7e-33 143.7 92 66.3
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 7.7e-33 143.7 92 66.3
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 1.0e-32 143.3 91 65.9
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 1.0e-32 143.3 94 66.0
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 1.3e-32 142.9 96 64.6
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 5.0e-32 141.0 92 66.3
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 8.5e-32 140.2 92 67.4
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 1.4e-31 139.4 97 58.8
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 2.5e-31 138.7 99 62.6
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 2.5e-31 138.7 99 62.6
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 3.2e-31 138.3 93 65.6
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 3.2e-31 138.3 93 65.6
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 7.2e-31 137.1 95 62.1
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 9.4e-31 136.7 87 67.8
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 1.6e-30 136.0 97 58.8
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 6.1e-30 134.0 83 71.1
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.8e-29 132.5 96 59.4
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 1.1e-28 129.8 96 57.3
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 1.1e-28 129.8 91 60.4
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 1.5e-28 129.4 95 56.8
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 4.4e-28 127.9 96 59.4
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 3.7e-27 124.8 84 66.7
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 3.7e-27 124.8 92 59.8
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 1.8e-26 122.5 95 55.8
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 7.0e-26 120.6 95 54.7
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 9.1e-26 120.2 91 56.0
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 9.1e-26 120.2 93 59.1
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 9.1e-26 120.2 93 59.1
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.5e-25 119.4 85 61.2
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 3.5e-25 118.2 83 60.2
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 5.9e-25 117.5 62 74.2
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 2.9e-24 115.2 111 51.4
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 5.0e-24 114.4 97 59.8
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 1.1e-23 113.2 95 53.7
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 2.5e-23 112.1 89 53.9
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 2.5e-23 112.1 81 59.3
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 3.2e-23 111.7 71 64.8
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 3.2e-23 111.7 87 51.7
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 4.2e-23 111.3 89 52.8
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 5.5e-23 110.9 92 52.2
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 7.2e-23 110.5 90 51.1
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 6.1e-22 107.5 79 59.5
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 6.1e-22 107.5 89 53.9
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 1.0e-21 106.7 91 52.7
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 1.4e-21 106.3 91 52.7
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 3.0e-21 105.1 92 53.3
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 6.7e-21 104.0 61 68.9
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 5.7e-20 100.9 94 50.0
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 2.8e-19 98.6 63 60.3
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 4.8e-19 97.8 106 45.3
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 4.8e-19 97.8 55 72.7
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 7.0e-18 94.0 51 72.5
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 2.2e-16 89.0 110 40.9
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 2.9e-16 88.6 44 81.8
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 1.5e-15 86.3 77 48.1
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 1.4e-13 79.7 80 47.5
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 3.5e-09 65.1 95 34.7


User provided reference genes

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