Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc74.83 Carica papaya HOM05D002977 ORTHO05D003225 1.3e-100 369.8 188 100.0
Duzib084G1184 Durio zibethinus HOM05D002977 ORTHO05D003225 5.2e-30 135.2 193 45.1
Potri.003G121100 Populus trichocarpa HOM05D002977 ORTHO05D003225 5.2e-30 135.2 193 43.5
Duzib205G0359 Durio zibethinus HOM05D002977 ORTHO05D003225 4.4e-29 132.1 195 43.6
Gohir.D08G197000 Gossypium hirsutum HOM05D002977 ORTHO05D003225 1.7e-28 130.2 188 43.1
Gorai.004G207700 Gossypium raimondii HOM05D002977 ORTHO05D003225 3.8e-28 129.0 188 42.6
TPR.G37675 Trifolium pratense HOM05D002977 ORTHO05D003225 3.8e-28 129.0 183 39.3
Gohir.A08G178500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 6.4e-28 128.3 188 42.6
Thecc.03G270800 Theobroma cacao HOM05D002977 ORTHO05D003225 1.1e-27 127.5 194 42.3
Dinv37695 Davidia involucrata HOM05D002977 ORTHO05D003225 1.9e-27 126.7 191 41.9
Potri.001G110900 Populus trichocarpa HOM05D002977 ORTHO05D003225 3.2e-27 125.9 193 42.5
Sabra01G0084500 Salix brachista HOM05D002977 ORTHO05D003225 5.4e-27 125.2 186 41.9
Sabra03G0085100 Salix brachista HOM05D002977 ORTHO05D003225 7.1e-27 124.8 193 38.9
Actinidia02049 Actinidia chinensis HOM05D002977 ORTHO05D003225 6.0e-26 121.7 193 39.4
Ciclev10023310m.g Citrus clementina HOM05D002977 ORTHO05D003225 1.0e-25 120.9 184 39.1
Medtr4g102650 Medicago truncatula HOM05D002977 ORTHO05D003225 1.0e-25 120.9 186 39.8
TWI81G0253 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 2.3e-25 119.8 184 42.9
QL12p017099 Quercus lobata HOM05D002977 ORTHO05D003225 1.1e-24 117.5 191 38.7
COL.COLO4_05272 Corchorus olitorius HOM05D002977 ORTHO05D003225 3.3e-24 115.9 184 40.2
Cc08_g13950 Coffea canephora HOM05D002977 ORTHO05D003225 7.3e-24 114.8 193 40.4
VMungo1215G3066 Vigna mungo HOM05D002977 ORTHO05D003225 2.1e-23 113.2 193 38.3
Prupe.5G089800 Prunus persica HOM05D002977 ORTHO05D003225 8.1e-23 111.3 190 38.9
Lj4g0001816 Lotus japonicus HOM05D002977 ORTHO05D003225 1.1e-22 110.9 191 36.6
Manes.02G027900 Manihot esculenta HOM05D002977 ORTHO05D003225 1.1e-22 110.9 189 38.6
Phvul.003G212900 Phaseolus vulgaris HOM05D002977 ORTHO05D003225 3.1e-22 109.4 192 37.5
arahy.Tifrunner.gnm1.ann1.ELA92E Arachis hypogaea HOM05D002977 ORTHO05D003225 6.9e-22 108.2 190 38.4
Glyma.17G132000 Glycine max HOM05D002977 ORTHO05D003225 9.0e-22 107.8 187 36.9
CiPaw.11G141500 Carya illinoinensis HOM05D002977 ORTHO05D003225 1.2e-21 107.5 192 42.7
Atru.chr9.1537 Acer truncatum HOM05D002977 ORTHO05D003225 2.6e-21 106.3 186 40.3
arahy.Tifrunner.gnm1.ann1.BQI3IB Arachis hypogaea HOM05D002977 ORTHO05D003225 2.6e-21 106.3 191 37.2
TWI60G0323 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 2.6e-21 106.3 192 41.1
Nitab4.5_0011100g0010 Nicotiana tabacum HOM05D002977 ORTHO05D003225 3.8e-20 102.4 184 36.4
Glyma.05G050000 Glycine max HOM05D002977 ORTHO05D003225 4.9e-20 102.1 193 35.2
CAN.G981.38 Capsicum annuum HOM05D002977 ORTHO05D003225 6.4e-20 101.7 183 35.5
SGA_v2.0_scaffold196G40889 Striga asiatica HOM05D002977 ORTHO05D003225 2.4e-19 99.8 188 36.7
Sopen08g028630 Solanum pennellii HOM05D002977 ORTHO05D003225 3.2e-19 99.4 182 34.6
MSTRG.25572 Avicennia marina HOM05D002977 ORTHO05D003225 5.4e-19 98.6 198 37.9
Manes.01G067700 Manihot esculenta HOM05D002977 ORTHO05D003225 7.1e-19 98.2 187 36.4
Cfa012096 Carpinus fangiana HOM05D002524 ORTHO05D002718 9.3e-19 97.8 181 38.7
Lalb_Chr05g0225091 Lupinus albus HOM05D002977 ORTHO05D003225 9.3e-19 97.8 195 35.4
Eucgr.E00527 Eucalyptus grandis HOM05D002977 ORTHO05D003225 1.2e-18 97.4 166 42.2
Peaxi162Scf00714g00621 Petunia axillaris HOM05D002977 ORTHO05D003225 1.2e-18 97.4 187 35.3
Hma1.2p1_0371F.1_g138190 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 1.6e-18 97.1 174 36.2
Nitab4.5_0001714g0160 Nicotiana tabacum HOM05D002977 ORTHO05D003225 2.1e-18 96.7 185 35.1
DCAR_006762 Daucus carota HOM05D002977 ORTHO05D003225 2.7e-18 96.3 183 34.4
Haze_08955 Corylus avellana HOM05D002977 ORTHO05D003225 3.5e-18 95.9 186 36.0
Psat4g067560 Pisum sativum HOM05D002977 ORTHO05D003225 2.3e-17 93.2 179 34.1
CiPaw.12G098800 Carya illinoinensis HOM05D002977 ORTHO05D003225 5.1e-17 92.0 197 36.5
Migut.E01299 Erythranthe guttata HOM05D002977 ORTHO05D003225 5.1e-17 92.0 186 32.8
Aqoxy7G00463 Aquilegia oxysepala HOM05D002977 ORTHO05D003225 8.7e-17 91.3 195 34.4
Solyc08g080280.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 8.7e-17 91.3 182 33.5
PGSC0003DMG400022757 Solanum tuberosum HOM05D002977 ORTHO05D003225 8.7e-17 91.3 183 33.3
Thecc.01G369200 Theobroma cacao HOM05D002977 ORTHO05D003225 8.7e-17 91.3 183 36.6
CANSAT21G2154 Cannabis sativa HOM05D002977 ORTHO05D003225 2.5e-16 89.7 187 35.3
PGR042G2476 Punica granatum HOM05D002977 ORTHO05D003225 3.3e-16 89.4 185 34.1
TAR629G3293 Trochodendron aralioides HOM05D002977 ORTHO05D003225 5.6e-16 88.6 184 39.7
Lsat_1_v5_gn_6_13021 Lactuca sativa HOM05D002977 ORTHO05D003225 1.3e-15 87.4 182 30.8
SGA_v2.0_scaffold286G47104 Striga asiatica HOM05D002977 ORTHO05D003225 2.1e-15 86.7 190 32.6
Nn6g34271 Nelumbo nucifera HOM05D002977 ORTHO05D003225 6.2e-15 85.1 190 34.7
THA.LOC104806370 Tarenaya hassleriana HOM05D002977 ORTHO05D003225 1.4e-14 84.0 180 35.6
Ca_20242_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 2.4e-14 83.2 183 31.7
Ca_29496_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 2.4e-14 83.2 183 31.7
COL.COLO4_06963 Corchorus olitorius HOM05D002977 ORTHO05D003225 1.2e-13 80.9 183 33.9
Glyma.01G215900 Glycine max HOM05D002977 ORTHO05D003225 5.8e-13 78.6 195 33.8
Migut.A00919 Erythranthe guttata HOM05D002977 ORTHO05D003225 9.9e-13 77.8 184 31.5
Ah.02g116430 Amaranthus hybridus HOM05D002977 ORTHO05D003225 1.7e-12 77.0 199 30.2
Ah.12g057650 Amaranthus hybridus HOM05D002977 ORTHO05D003225 1.7e-12 77.0 196 31.1
ClCG01G003130 Citrullus lanatus HOM05D002977 ORTHO05D003225 1.7e-12 77.0 183 32.2
HanXRQChr07g0188421 Helianthus annuus HOM05D002977 ORTHO05D003225 1.7e-12 77.0 168 32.1
FvH4_5g01430 Fragaria vesca HOM05D002977 ORTHO05D003225 2.2e-12 76.6 191 30.4
FAN18G2499 Fragaria x ananassa HOM05D002524 ORTHO05D002718 2.2e-12 76.6 190 30.5
Nn1g01342 Nelumbo nucifera HOM05D002977 ORTHO05D003225 2.2e-12 76.6 190 36.3
AL6G46490 Arabidopsis lyrata HOM05D002977 ORTHO05D003225 8.4e-12 74.7 187 32.6
Cpa.g.c33531 Carica papaya HOM05D002977 ORTHO05D003225 8.4e-12 74.7 182 32.4
AT4G11780 Arabidopsis thaliana HOM05D002977 ORTHO05D003225 3.2e-11 72.8 187 32.1
Lj2C196G7 Lonicera japonica HOM05D002977 ORTHO05D003225 3.2e-11 72.8 73 45.2
Hund28360 Selenicereus undatus HOM05D002977 ORTHO05D003225 4.2e-11 72.4 122 39.3
Hund28364 Selenicereus undatus HOM05D002977 ORTHO05D003225 4.2e-11 72.4 122 39.3
Carub.0006s3089 Capsella rubella HOM05D002977 ORTHO05D003225 5.4e-11 72.0 186 31.2
CsaV3_5G003260 Cucumis sativus L. HOM05D002977 ORTHO05D003225 5.4e-11 72.0 179 31.8
Sp7g21110 Schrenkiella parvula HOM05D002977 ORTHO05D003225 5.4e-11 72.0 186 34.4
CARHR254530 Cardamine hirsuta HOM05D002977 ORTHO05D003225 7.1e-11 71.6 185 31.9
RcHm_v2.0_Chr7g0199421 Rosa chinensis HOM05D002977 ORTHO05D003225 7.1e-11 71.6 185 28.6
FAN04G2551 Fragaria x ananassa HOM05D002524 ORTHO05D002718 1.2e-10 70.9 187 29.4
ECA233G2885 Erigeron canadensis HOM05D002977 ORTHO05D003225 3.5e-10 69.3 182 30.2
Thhalv10028604m.g Eutrema salsugineum HOM05D002977 ORTHO05D003225 3.5e-10 69.3 185 31.9
MBI04_g42596_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 3.5e-10 69.3 182 33.0
Duzib138G0317 Durio zibethinus HOM05D002977 ORTHO05D003225 4.6e-10 68.9 132 36.4
MBI12_g11809_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 6.0e-10 68.6 184 31.0
CSS0040991 Camellia sinensis var. sinensis HOM05D002977 ORTHO05D003225 7.9e-10 68.2 185 31.4
Potri.002G152700 Populus trichocarpa HOM05D002977 ORTHO05D003225 7.9e-10 68.2 193 29.5
Sabra02G0121100 Salix brachista HOM05D002977 ORTHO05D003225 7.9e-10 68.2 198 30.3
Sed0005409 Sechium edule HOM05D002977 ORTHO05D003225 7.9e-10 68.2 169 32.0
Thhalv10025169m.g Eutrema salsugineum HOM05D002977 ORTHO05D003225 1.0e-09 67.8 182 28.6
Sc01g0008790 Simmondsia chinensis HOM05D002977 ORTHO05D003225 1.3e-09 67.4 72 41.7
A01p14320 Brassica napus HOM05D002977 ORTHO05D003225 1.8e-09 67.0 186 33.3
BraA01t01377Z Brassica rapa HOM05D002977 ORTHO05D003225 1.8e-09 67.0 186 33.3
CARHR230080 Cardamine hirsuta HOM05D002977 ORTHO05D003225 2.3e-09 66.6 187 32.1
FAN08G2595 Fragaria x ananassa HOM05D002524 ORTHO05D002718 3.0e-09 66.2 174 29.9
Actinidia33447 Actinidia chinensis HOM05D002977 ORTHO05D003225 3.9e-09 65.9 164 32.3
BcaC09g51034 Brassica carinata HOM05D002977 ORTHO05D003225 3.9e-09 65.9 186 32.3
C01p17640 Brassica napus HOM05D002977 ORTHO05D003225 3.9e-09 65.9 186 32.8
Duzib133G0091 Durio zibethinus HOM05D002977 ORTHO05D003225 3.9e-09 65.9 187 33.2
ECA246G0913 Erigeron canadensis HOM05D002977 ORTHO05D003225 3.9e-09 65.9 168 29.8
GSVIVG01027598001 Vitis vinifera HOM05D002977 ORTHO05D003225 6.7e-09 65.1 131 35.9
Cfa004177 Carpinus fangiana HOM05D002977 ORTHO05D003225 1.5e-08 63.9 185 27.0
Haze_15232 Corylus avellana HOM05D002977 ORTHO05D003225 1.5e-08 63.9 187 29.4
PSO782G0819 Papaver somniferum HOM05D002977 ORTHO05D003225 1.5e-08 63.9 215 29.8
Actinidia14518 Actinidia chinensis HOM05D000078 ORTHO05D003225 1.9e-08 63.5 136 33.8
A09p27340 Brassica napus HOM05D002977 ORTHO05D003225 1.9e-08 63.5 186 30.1
CiPaw.02G024700 Carya illinoinensis HOM05D002977 ORTHO05D003225 2.5e-08 63.2 181 27.6
BraA09t38300Z Brassica rapa HOM05D002977 ORTHO05D003225 3.3e-08 62.8 186 29.0
vmacro20976 Vaccinium macrocarpon HOM05D002977 ORTHO05D003225 3.3e-08 62.8 157 29.9
DCAR_008585 Daucus carota HOM05D002977 ORTHO05D003225 4.3e-08 62.4 139 32.4
PSO478G2989 Papaver somniferum HOM05D002977 ORTHO05D003225 4.3e-08 62.4 215 29.3
Prupe.2G153900 Prunus persica HOM05D002977 ORTHO05D003225 4.3e-08 62.4 190 28.9
VMungo0331G1467 Vigna mungo HOM05D002977 ORTHO05D003225 4.3e-08 62.4 179 31.3
BcaB01g01677 Brassica carinata HOM05D002977 ORTHO05D003225 5.6e-08 62.0 185 29.7
C09p34660 Brassica napus HOM05D002977 ORTHO05D003225 9.6e-08 61.2 186 29.6
BolC9t56312H Brassica oleracea HOM05D002977 ORTHO05D003225 9.6e-08 61.2 186 29.6
RcHm_v2.0_Chr1g0352121 Rosa chinensis HOM05D002977 ORTHO05D003225 9.6e-08 61.2 185 29.7
MD07G1125600 Malus domestica HOM05D002977 ORTHO05D003225 1.3e-07 60.8 185 29.7
FAN01G0110 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.6e-07 60.5 189 30.2
Glyma.03G017800 Glycine max HOM05D002977 ORTHO05D003225 1.6e-07 60.5 177 30.5
Potri.014G077400 Populus trichocarpa HOM05D002977 ORTHO05D003225 1.6e-07 60.5 197 28.9
ECA236G0338 Erigeron canadensis HOM05D002977 ORTHO05D003225 2.1e-07 60.1 178 27.0
Glyma.07G079500 Glycine max HOM05D002977 ORTHO05D003225 6.2e-07 58.5 120 33.3
Sabra14G0054900 Salix brachista HOM05D002977 ORTHO05D003225 6.2e-07 58.5 193 27.5
HanXRQChr06g0168991 Helianthus annuus HOM05D002977 ORTHO05D003225 8.1e-07 58.2 124 28.2
MD01G1047600 Malus domestica HOM05D002977 ORTHO05D003225 8.1e-07 58.2 186 29.6
QL08p050716 Quercus lobata HOM05D002977 ORTHO05D003225 8.1e-07 58.2 181 28.2
Sp6g05680 Schrenkiella parvula HOM05D002977 ORTHO05D003225 8.1e-07 58.2 184 29.3
arahy.Tifrunner.gnm1.ann1.YQQF81 Arachis hypogaea HOM05D002977 ORTHO05D003225 1.1e-06 57.8 121 34.7
AUR62010660 Chenopodium quinoa HOM05D002977 ORTHO05D003225 1.1e-06 57.8 183 26.8
CSS0002536 Camellia sinensis var. sinensis HOM05D002977 ORTHO05D003225 4.0e-06 55.8 103 33.0
Dinv43754 Davidia involucrata HOM05D002977 ORTHO05D003225 6.9e-06 55.1 115 29.6
Gorai.004G156200 Gossypium raimondii HOM05D002977 ORTHO05D003225 6.9e-06 55.1 177 30.5
TWI59G0633 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 6.9e-06 55.1 197 30.5
Dinv39013 Davidia involucrata HOM05D002977 ORTHO05D003225 9.0e-06 54.7 183 30.1
Gohir.D08G150500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 9.0e-06 54.7 177 30.5
SGA_v2.0_scaffold153G37063 Striga asiatica HOM05D002977 ORTHO05D003225 9.0e-06 54.7 120 30.0


User provided reference genes

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