Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc73.42 Carica papaya HOM05D004830 ORTHO05D005310 8.3e-137 490.3 244 100.0
Thecc.05G236700 Theobroma cacao HOM05D004830 ORTHO05D005310 7.7e-66 254.6 194 64.9
COL.COLO4_33470 Corchorus olitorius HOM05D004830 ORTHO05D005310 1.3e-65 253.8 194 64.9
Duzib106G0998 Durio zibethinus HOM05D004830 ORTHO05D005310 2.5e-64 249.6 194 63.4
Manes.08G155600 Manihot esculenta HOM05D004830 ORTHO05D005310 9.4e-64 247.7 194 64.4
Gohir.A11G224212 Gossypium hirsutum HOM05D004830 ORTHO05D005310 2.6e-61 239.6 196 61.2
TWI34G0970 Tripterygium wilfordii HOM05D004830 ORTHO05D005310 3.7e-60 235.7 225 57.3
Atru.chr2.1607 Acer truncatum HOM05D004830 ORTHO05D005310 4.1e-59 232.3 191 60.7
Dinv14555 Davidia involucrata HOM05D004830 ORTHO05D005310 7.0e-59 231.5 195 61.0
Gohir.D11G237500 Gossypium hirsutum HOM05D004830 ORTHO05D005310 4.5e-58 228.8 196 60.7
Gorai.007G250900 Gossypium raimondii HOM05D004830 ORTHO05D005310 4.5e-58 228.8 196 60.7
TAR633G1142 Trochodendron aralioides HOM05D004830 ORTHO05D005310 4.5e-58 228.8 215 56.3
GSVIVG01029897001 Vitis vinifera HOM05D004830 ORTHO05D005310 8.5e-57 224.6 192 58.9
Ciclev10032343m.g Citrus clementina HOM05D004830 ORTHO05D005310 1.4e-54 217.2 193 61.7
RhsimUnG0023100 Rhododendron simsii HOM05D004830 ORTHO05D005310 2.6e-53 213.0 241 50.6
CiPaw.09G053100 Carya illinoinensis HOM05D004830 ORTHO05D005310 1.2e-50 204.1 194 58.8
Lalb_Chr22g0358351 Lupinus albus HOM05D004830 ORTHO05D005310 1.6e-50 203.8 188 54.3
Prupe.7G025800 Prunus persica HOM05D004830 ORTHO05D005310 3.8e-49 199.1 159 67.3
Sabra13G0059800 Salix brachista HOM05D004830 ORTHO05D005310 7.2e-48 194.9 194 56.7
QL07p015956 Quercus lobata HOM05D004830 ORTHO05D005310 1.2e-47 194.1 173 57.2
Prupe.1G058500 Prunus persica HOM05D004830 ORTHO05D005310 3.6e-47 192.6 130 75.4
MBI19_g15087_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 1.0e-46 191.0 195 53.3
PGR042G2697 Punica granatum HOM05D004830 ORTHO05D005310 5.2e-46 188.7 185 53.5
Potri.013G068900 Populus trichocarpa HOM05D004830 ORTHO05D005310 1.5e-45 187.2 225 49.8
Haze_20367 Corylus avellana HOM05D004830 ORTHO05D005310 2.0e-45 186.8 194 56.7
MD14G1012800 Malus domestica HOM05D004830 ORTHO05D005310 2.0e-45 186.8 137 69.3
Nn7g37285 Nelumbo nucifera HOM05D004830 ORTHO05D005310 1.1e-43 181.0 119 73.9
TPR.G23653 Trifolium pratense HOM05D004830 ORTHO05D005310 9.1e-43 177.9 174 54.6
MBI19_g09302_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 7.7e-42 174.9 160 60.0
Lj1g0023159 Lotus japonicus HOM05D004830 ORTHO05D005310 1.0e-41 174.5 231 45.9
RcHm_v2.0_Chr3g0495501 Rosa chinensis HOM05D004830 ORTHO05D005310 3.8e-41 172.6 156 57.1
Ca_03431_v3 Cicer arietinum L. HOM05D004830 ORTHO05D005310 1.1e-40 171.0 173 53.2
arahy.Tifrunner.gnm1.ann1.TSAG7F Arachis hypogaea HOM05D004830 ORTHO05D005310 1.5e-40 170.6 201 46.8
Eucgr.A02163 Eucalyptus grandis HOM05D004830 ORTHO05D005310 3.3e-40 169.5 204 49.0
ATR0307G071 Amborella trichopoda HOM05D004830 ORTHO05D005310 8.9e-38 161.4 194 46.9
Medtr7g087480 Medicago truncatula HOM05D004830 ORTHO05D005310 2.6e-37 159.8 222 45.0
FAN26G1469 Fragaria x ananassa HOM05D004830 ORTHO05D005310 3.4e-37 159.5 114 68.4
Psat3g084280 Pisum sativum HOM05D004830 ORTHO05D005310 9.8e-37 157.9 205 45.4
MSTRG.6264 Avicennia marina HOM05D004830 ORTHO05D005310 2.2e-36 156.8 183 50.8
FvH4_1g29410 Fragaria vesca HOM05D004830 ORTHO05D005310 1.8e-35 153.7 164 54.3
FAN19G2808 Fragaria x ananassa HOM05D004830 ORTHO05D005310 1.8e-35 153.7 164 54.3
FAN28G2201 Fragaria x ananassa HOM05D004830 ORTHO05D005310 5.4e-35 152.1 167 53.9
Aqoxy2G00040 Aquilegia oxysepala HOM05D004830 ORTHO05D005310 7.0e-35 151.8 158 53.8
PSO591G0293 Papaver somniferum HOM05D004830 ORTHO05D005310 1.6e-34 150.6 241 44.4
PSO832G0423 Papaver somniferum HOM05D004830 ORTHO05D005310 1.3e-33 147.5 246 42.7
SEGI_37187 Sequoiadendron giganteum HOM05D004830 ORTHO05D005310 5.6e-32 142.1 178 42.1
Glyma.19G121200 Glycine max HOM05D004830 ORTHO05D005310 6.1e-31 138.7 121 56.2
Cfa019887 Carpinus fangiana HOM05D004830 ORTHO05D005310 5.2e-30 135.6 194 45.9
Migut.J01591 Erythranthe guttata HOM05D004830 ORTHO05D005310 3.4e-29 132.9 190 41.1
Phvul.001G101700 Phaseolus vulgaris HOM05D004830 ORTHO05D005310 3.3e-24 116.3 147 44.9
ATR0561G210 Amborella trichopoda HOM05D004830 ORTHO05D005310 1.2e-23 114.4 119 45.4
VMungo1383G2348 Vigna mungo HOM05D004830 ORTHO05D005310 1.2e-23 114.4 151 44.4
Medtr3g089170 Medicago truncatula HOM05D004830 ORTHO05D005310 8.0e-23 111.7 119 47.1
Ca_24504_v3 Cicer arietinum L. HOM05D004830 ORTHO05D005310 5.2e-22 109.0 119 43.7
Thecc.03G128400 Theobroma cacao HOM05D004830 ORTHO05D005310 2.0e-21 107.1 119 44.5
unitig_8.g3032 Utricularia gibba HOM05D004830 ORTHO05D005310 2.0e-21 107.1 121 44.6
VMungo1309G0155 Vigna mungo HOM05D004830 ORTHO05D005310 2.0e-21 107.1 121 41.3
Peaxi162Scf00536g00113 Petunia axillaris HOM05D004830 ORTHO05D005310 2.6e-21 106.7 115 42.6
Atru.chr9.1044 Acer truncatum HOM05D004830 ORTHO05D005310 4.4e-21 105.9 119 43.7
GSVIVG01008536001 Vitis vinifera HOM05D004830 ORTHO05D005310 4.4e-21 105.9 119 42.0
CiPaw.11G008200 Carya illinoinensis HOM05D004830 ORTHO05D005310 5.8e-21 105.5 119 42.9
Lj1g0026153 Lotus japonicus HOM05D004830 ORTHO05D005310 5.8e-21 105.5 129 40.3
Potri.012G097200 Populus trichocarpa HOM05D004830 ORTHO05D005310 5.8e-21 105.5 119 42.0
CSS0034026 Camellia sinensis var. sinensis HOM05D004830 ORTHO05D005310 7.5e-21 105.1 117 42.7
Glyma.06G170600 Glycine max HOM05D004830 ORTHO05D005310 7.5e-21 105.1 119 41.2
Nitab4.5_0002855g0030 Nicotiana tabacum HOM05D004830 ORTHO05D005310 7.5e-21 105.1 111 43.2
Lalb_Chr11g0069591 Lupinus albus HOM05D004830 ORTHO05D005310 9.8e-21 104.8 119 41.2
MBI13_g01839_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 9.8e-21 104.8 135 37.8
Glyma.04G195400 Glycine max HOM05D004830 ORTHO05D005310 1.3e-20 104.4 119 41.2
Cfa018828 Carpinus fangiana HOM05D004830 ORTHO05D005310 1.7e-20 104.0 119 42.0
RcHm_v2.0_Chr7g0190301 Rosa chinensis HOM05D004830 ORTHO05D005310 1.7e-20 104.0 135 39.3
Ciclev10022323m.g Citrus clementina HOM05D004830 ORTHO05D005310 2.2e-20 103.6 146 37.7
Phvul.009G166700 Phaseolus vulgaris HOM05D004830 ORTHO05D005310 2.9e-20 103.2 119 40.3
Actinidia08868 Actinidia chinensis HOM05D004830 ORTHO05D005310 3.7e-20 102.8 210 31.0
Gohir.A03G052400 Gossypium hirsutum HOM05D004830 ORTHO05D005310 3.7e-20 102.8 119 42.0
COL.COLO4_28101 Corchorus olitorius HOM05D004830 ORTHO05D005310 4.9e-20 102.4 119 42.0
Aqoxy5G03391 Aquilegia oxysepala HOM05D004830 ORTHO05D005310 6.4e-20 102.1 119 40.3
Aqoxy7G00964 Aquilegia oxysepala HOM05D004830 ORTHO05D005310 6.4e-20 102.1 119 40.3
Lj5A97T92 Lonicera japonica HOM05D004830 ORTHO05D005310 6.4e-20 102.1 120 44.2
MSTRG.11282 Avicennia marina HOM05D004830 ORTHO05D005310 1.1e-19 101.3 117 40.2
Cpa.g.sc13.124 Carica papaya HOM05D004830 ORTHO05D005310 1.1e-19 101.3 119 40.3
Os08g0530500 Oryza sativa ssp. japonica HOM05D004830 ORTHO05D005310 1.1e-19 101.3 109 43.1
FvH4_5g08220 Fragaria vesca HOM05D004830 ORTHO05D005310 1.4e-19 100.9 105 43.8
FAN08G1417 Fragaria x ananassa HOM05D004830 ORTHO05D005310 1.4e-19 100.9 119 42.0
Manes.14G051600 Manihot esculenta HOM05D004830 ORTHO05D005310 1.4e-19 100.9 119 41.2
Nitab4.5_0002062g0020 Nicotiana tabacum HOM05D004830 ORTHO05D005310 1.4e-19 100.9 111 42.3
Migut.I00505 Erythranthe guttata HOM05D004830 ORTHO05D005310 1.9e-19 100.5 117 39.3
FAN18G1516 Fragaria x ananassa HOM05D004830 ORTHO05D005310 1.9e-19 100.5 105 43.8
Gorai.003G121000 Gossypium raimondii HOM05D004830 ORTHO05D005310 1.9e-19 100.5 119 42.0
TAR622G0015 Trochodendron aralioides HOM05D004830 ORTHO05D005310 1.9e-19 100.5 119 40.3
ECA232G3637 Erigeron canadensis HOM05D004830 ORTHO05D005310 2.4e-19 100.1 114 41.2
Eucgr.K02732 Eucalyptus grandis HOM05D004830 ORTHO05D005310 2.4e-19 100.1 109 43.1
Rhsim12G0174200 Rhododendron simsii HOM05D004830 ORTHO05D005310 2.4e-19 100.1 119 38.7
ATR0332G003 Amborella trichopoda HOM05D004830 ORTHO05D005310 3.2e-19 99.8 119 42.0
Prupe.5G151800 Prunus persica HOM05D004830 ORTHO05D005310 3.2e-19 99.8 135 36.3
arahy.Tifrunner.gnm1.ann1.CC2DBD Arachis hypogaea HOM05D004830 ORTHO05D005310 4.1e-19 99.4 119 40.3
Duzib084G0035 Durio zibethinus HOM05D004830 ORTHO05D005310 4.1e-19 99.4 119 41.2
QL10p003269 Quercus lobata HOM05D004830 ORTHO05D005310 5.4e-19 99.0 119 41.2
FAN13G1978 Fragaria x ananassa HOM05D004830 ORTHO05D005310 7.0e-19 98.6 105 42.9
HanXRQChr09g0273121 Helianthus annuus HOM05D004830 ORTHO05D005310 7.0e-19 98.6 114 43.0
Oeu056012.1 Olea europaea HOM05D004830 ORTHO05D005310 9.2e-19 98.2 153 34.6
MD06G1142500 Malus domestica HOM05D004830 ORTHO05D005310 1.2e-18 97.8 135 36.3
vmacro16674 Vaccinium macrocarpon HOM05D004830 ORTHO05D005310 1.2e-18 97.8 114 40.4
PSO782G4089 Papaver somniferum HOM05D004830 ORTHO05D005310 4.6e-18 95.9 119 42.0
arahy.Tifrunner.gnm1.ann1.228PAQ Arachis hypogaea HOM05D004830 ORTHO05D005310 6.0e-18 95.5 119 38.7
Lsat_1_v5_gn_4_80120 Lactuca sativa HOM05D004830 ORTHO05D005310 7.8e-18 95.1 114 39.5
PSO063G3292 Papaver somniferum HOM05D004830 ORTHO05D005310 7.8e-18 95.1 119 41.2
QL10p003237 Quercus lobata HOM05D004830 ORTHO05D005310 1.0e-17 94.7 119 39.5
CANSAT78G0784 Cannabis sativa HOM05D004830 ORTHO05D005310 1.3e-17 94.4 167 35.9
QL10p003210 Quercus lobata HOM05D004830 ORTHO05D005310 1.3e-17 94.4 119 41.2
PGR044G2645 Punica granatum HOM05D004830 ORTHO05D005310 1.7e-17 94.0 119 36.1
CDE02G3469 Ceratophyllum demersum HOM05D004830 ORTHO05D005310 2.3e-17 93.6 118 39.0
Cc00_g11930 Coffea canephora HOM05D004830 ORTHO05D005310 3.3e-16 89.7 111 39.6
Hma1.2p1_0894F.1_g233680 Hydrangea macrophylla HOM05D004830 ORTHO05D005310 1.2e-15 87.8 96 49.0
MBI11_g07465_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 2.8e-15 86.7 119 36.1
Haze_07222 Corylus avellana HOM05D004830 ORTHO05D005310 3.7e-12 76.3 89 40.4
Nn3g16476 Nelumbo nucifera HOM05D004830 ORTHO05D005310 3.5e-10 69.7 62 46.8
DCAR_013505 Daucus carota HOM05D004830 ORTHO05D005310 6.2e-07 58.9 58 50.0
Gohir.D06G037550 Gossypium hirsutum HOM05D004830 ORTHO05D005310 2.4e-06 57.0 57 43.9
Dinv23140 Davidia involucrata HOM05D004830 ORTHO05D005310 8.9e-06 55.1 51 45.1


User provided reference genes

Program Settings