Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc73.14 Carica papaya HOM05D006025 ORTHO05D008547 4.6e-172 607.8 315 100.0
Actinidia31175 Actinidia chinensis HOM05D006025 ORTHO05D008547 5.9e-103 378.3 254 76.8
Manes.05G096000 Manihot esculenta HOM05D006025 ORTHO05D008547 8.6e-102 374.4 321 66.0
Sabra10G0030400 Salix brachista HOM05D006025 ORTHO05D008547 3.3e-101 372.5 276 71.4
Cfa009042 Carpinus fangiana HOM05D006025 ORTHO05D008547 9.5e-101 370.9 309 65.4
Potri.010G034400 Populus trichocarpa HOM05D006025 ORTHO05D008547 9.5e-101 370.9 248 76.2
Dinv34195 Davidia involucrata HOM05D006025 ORTHO05D008547 1.2e-100 370.5 242 78.5
Thecc.02G232800 Theobroma cacao HOM05D006025 ORTHO05D008547 1.2e-100 370.5 324 65.4
COL.COLO4_36182 Corchorus olitorius HOM05D006025 ORTHO05D008547 2.1e-100 369.8 324 63.6
CANSAT78G1034 Cannabis sativa HOM05D006025 ORTHO05D008547 8.0e-100 367.9 324 64.8
Ciclev10032129m.g Citrus clementina HOM05D006025 ORTHO05D008547 4.0e-99 365.5 250 72.0
CiPaw.05G140400 Carya illinoinensis HOM05D006025 ORTHO05D008547 6.8e-99 364.8 319 63.6
Atru.chr11.1861 Acer truncatum HOM05D006025 ORTHO05D008547 2.6e-98 362.8 319 65.8
Thhalv10004613m.g Eutrema salsugineum HOM05D006025 ORTHO05D008547 3.4e-98 362.5 315 64.8
FAN12G1990 Fragaria x ananassa HOM05D006025 ORTHO05D008547 3.4e-98 362.5 324 65.1
FvH4_4g32070 Fragaria vesca HOM05D006025 ORTHO05D008547 5.8e-98 361.7 328 64.3
MD16G1079500 Malus domestica HOM05D006025 ORTHO05D008547 7.5e-98 361.3 328 62.8
QL03p065944 Quercus lobata HOM05D006025 ORTHO05D008547 2.2e-97 359.8 317 63.7
FAN22G0508 Fragaria x ananassa HOM05D006025 ORTHO05D008547 2.9e-97 359.4 319 64.3
Rhsim12G0129700 Rhododendron simsii HOM05D006025 ORTHO05D008547 3.7e-97 359.0 313 64.2
FAN07G0827 Fragaria x ananassa HOM05D006025 ORTHO05D008547 4.9e-97 358.6 326 63.8
Phvul.002G080900 Phaseolus vulgaris HOM05D006025 ORTHO05D008547 6.4e-97 358.2 330 60.9
TPR.G26717 Trifolium pratense HOM05D006025 ORTHO05D008547 1.1e-96 357.5 234 76.1
Medtr5g037600 Medicago truncatula HOM05D006025 ORTHO05D008547 2.4e-96 356.3 275 68.0
Glyma.01G040500 Glycine max HOM05D006025 ORTHO05D008547 3.2e-96 355.9 234 75.6
VMungo1215G1908 Vigna mungo HOM05D006025 ORTHO05D008547 3.2e-96 355.9 292 65.1
Prupe.1G267200 Prunus persica HOM05D006025 ORTHO05D008547 4.1e-96 355.5 327 64.5
Lj2g0002167 Lotus japonicus HOM05D006025 ORTHO05D008547 1.2e-95 354.0 324 61.7
PGR119G0173 Punica granatum HOM05D006025 ORTHO05D008547 1.2e-95 354.0 322 60.9
Gorai.009G347000 Gossypium raimondii HOM05D006025 ORTHO05D008547 1.6e-95 353.6 319 62.1
Gohir.A05G321100 Gossypium hirsutum HOM05D006025 ORTHO05D008547 2.7e-95 352.8 320 62.5
Carub.0005s0158 Capsella rubella HOM05D006025 ORTHO05D008547 1.3e-94 350.5 318 62.3
Gohir.D05G323300 Gossypium hirsutum HOM05D006025 ORTHO05D008547 1.3e-94 350.5 316 61.7
Sp2g13810 Schrenkiella parvula HOM05D006025 ORTHO05D008547 1.7e-94 350.1 320 62.2
vmacro16324 Vaccinium macrocarpon HOM05D006025 ORTHO05D008547 1.7e-94 350.1 359 58.5
MD13G1079600 Malus domestica HOM05D006025 ORTHO05D008547 2.3e-94 349.7 331 60.4
TAR481G0011 Trochodendron aralioides HOM05D006025 ORTHO05D008547 6.6e-94 348.2 269 66.5
Sc11g0001660 Simmondsia chinensis HOM05D006025 ORTHO05D008547 8.6e-94 347.8 231 76.2
Lalb_Chr05g0217521 Lupinus albus HOM05D006025 ORTHO05D008547 1.1e-93 347.4 323 61.3
RcHm_v2.0_Chr4g0440761 Rosa chinensis HOM05D006025 ORTHO05D008547 1.5e-93 347.1 325 61.2
GSVIVG01020079001 Vitis vinifera HOM05D006025 ORTHO05D008547 1.5e-93 347.1 321 62.0
CAN.G27.7 Capsicum annuum HOM05D006025 ORTHO05D008547 1.9e-93 346.7 307 62.5
BraA09t37996Z Brassica rapa HOM05D006025 ORTHO05D008547 4.3e-93 345.5 319 60.8
BcaC06g34048 Brassica carinata HOM05D006025 ORTHO05D008547 9.5e-93 344.4 225 75.6
Ca_04692_v3 Cicer arietinum L. HOM05D006025 ORTHO05D008547 9.5e-93 344.4 323 60.1
BolC7t43841H Brassica oleracea HOM05D006025 ORTHO05D008547 1.2e-92 344.0 225 76.0
BcaC06g31223 Brassica carinata HOM05D006025 ORTHO05D008547 1.6e-92 343.6 323 60.7
AL5G11850 Arabidopsis lyrata HOM05D006025 ORTHO05D008547 2.8e-92 342.8 319 60.8
Psat2g115440 Pisum sativum HOM05D006025 ORTHO05D008547 6.2e-92 341.7 317 61.5
AT2G02590 Arabidopsis thaliana HOM05D006025 ORTHO05D008547 1.4e-91 340.5 319 60.2
A06p43550 Brassica napus HOM05D006025 ORTHO05D008547 1.4e-91 340.5 248 70.2
CsaV3_5G032300 Cucumis sativus L. HOM05D006025 ORTHO05D008547 1.8e-91 340.1 245 71.8
TWI18G0579 Tripterygium wilfordii HOM05D006025 ORTHO05D008547 1.8e-91 340.1 239 71.5
BraA06t27240Z Brassica rapa HOM05D006025 ORTHO05D008547 2.3e-91 339.7 248 70.2
Duzib268G1145 Durio zibethinus HOM05D006025 ORTHO05D008547 3.1e-91 339.3 299 65.2
C07p33300 Brassica napus HOM05D006025 ORTHO05D008547 4.0e-91 339.0 318 61.0
Lj6A795T74 Lonicera japonica HOM05D006025 ORTHO05D008547 4.0e-91 339.0 299 62.9
MELO3C012062.2 Cucumis melo HOM05D006025 ORTHO05D008547 8.9e-91 337.8 245 71.8
Aa31LG2G7560 Aethionema arabicum HOM05D006025 ORTHO05D008547 1.2e-90 337.4 316 59.2
A09p23920 Brassica napus HOM05D006025 ORTHO05D008547 1.2e-90 337.4 319 60.2
Nitab4.5_0000679g0100 Nicotiana tabacum HOM05D006025 ORTHO05D008547 1.5e-90 337.0 250 70.4
CARHR145110 Cardamine hirsuta HOM05D006025 ORTHO05D008547 2.0e-90 336.7 314 61.1
arahy.Tifrunner.gnm1.ann1.1ZL8TB Arachis hypogaea HOM05D006025 ORTHO05D008547 3.4e-90 335.9 333 60.1
arahy.Tifrunner.gnm1.ann1.V5YJYF Arachis hypogaea HOM05D006025 ORTHO05D008547 4.4e-90 335.5 333 59.8
Sed0022227 Sechium edule HOM05D006025 ORTHO05D008547 1.7e-89 333.6 238 70.2
THA.LOC104805137 Tarenaya hassleriana HOM05D000131 ORTHO05D000086 1.7e-89 333.6 323 60.1
ClCG05G024630 Citrullus lanatus HOM05D006025 ORTHO05D008547 3.7e-89 332.4 239 71.5
Migut.E00118 Erythranthe guttata HOM05D006025 ORTHO05D008547 1.1e-88 330.9 319 58.0
Nn4g23031 Nelumbo nucifera HOM05D006025 ORTHO05D008547 1.1e-88 330.9 274 64.2
Hund25274 Selenicereus undatus HOM05D006025 ORTHO05D008547 2.4e-88 329.7 248 70.2
EL10Ac6g13142 Beta vulgaris HOM05D006025 ORTHO05D008547 3.2e-88 329.3 240 70.8
Cc11_g13550 Coffea canephora HOM05D006025 ORTHO05D008547 5.4e-88 328.6 324 57.4
C09p30780 Brassica napus HOM05D006025 ORTHO05D008547 1.6e-87 327.0 274 63.1
BolC9t55941H Brassica oleracea HOM05D006025 ORTHO05D008547 4.6e-87 325.5 269 63.9
SalBow8G3437 Salvia bowleyana HOM05D006025 ORTHO05D008547 3.0e-86 322.8 318 57.2
BcaC04g21520 Brassica carinata HOM05D006025 ORTHO05D008547 3.9e-86 322.4 265 63.8
Migut.L01348 Erythranthe guttata HOM05D006025 ORTHO05D008547 6.6e-86 321.6 324 57.7
Ah.03g132040 Amaranthus hybridus HOM05D006025 ORTHO05D008547 2.5e-85 319.7 231 70.6
Haze_12072 Corylus avellana HOM05D006025 ORTHO05D008547 2.8e-84 316.2 283 62.5
PSO478G1322 Papaver somniferum HOM05D006025 ORTHO05D008547 8.1e-84 314.7 274 61.7
DCAR_024490 Daucus carota HOM05D006025 ORTHO05D008547 2.4e-83 313.2 209 74.2
Eucgr.B02589 Eucalyptus grandis HOM05D006025 ORTHO05D008547 3.1e-83 312.8 219 70.3
Sopen05g002930 Solanum pennellii HOM05D006025 ORTHO05D008547 9.9e-82 307.8 256 63.7
HanXRQChr15g0478181 Helianthus annuus HOM05D006025 ORTHO05D008547 2.2e-81 306.6 295 58.0
PGSC0003DMG400017619 Solanum tuberosum HOM05D006025 ORTHO05D008547 2.9e-81 306.2 252 63.9
MBI04_g22196_MAGBIO Magnolia biondii HOM05D006025 ORTHO05D008547 3.8e-81 305.8 198 76.3
AUR62026262 Chenopodium quinoa HOM05D006025 ORTHO05D008547 4.9e-81 305.4 210 73.3
ATR0665G167 Amborella trichopoda HOM05D006025 ORTHO05D008547 6.4e-81 305.1 274 61.3
BcaB07g30697 Brassica carinata HOM05D006025 ORTHO05D008547 1.1e-80 304.3 291 60.8
Lsat_1_v5_gn_3_49700 Lactuca sativa HOM05D006025 ORTHO05D008547 4.1e-80 302.4 238 64.7
CSS0050443 Camellia sinensis var. sinensis HOM05D006025 ORTHO05D008547 5.4e-80 302.0 198 77.3
Aqoxy3G00786 Aquilegia oxysepala HOM05D006025 ORTHO05D008547 7.8e-79 298.1 234 65.4
Oeu044566.1 Olea europaea HOM05D006025 ORTHO05D008547 7.8e-79 298.1 243 64.2
Nitab4.5_0002969g0040 Nicotiana tabacum HOM05D006025 ORTHO05D008547 5.1e-78 295.4 254 63.4
AUR62026454 Chenopodium quinoa HOM05D006025 ORTHO05D008547 8.7e-78 294.7 217 71.9
Peaxi162Scf00209g00517 Petunia axillaris HOM05D006025 ORTHO05D008547 1.5e-77 293.9 255 62.7
Os03g0800500 Oryza sativa ssp. japonica HOM05D006025 ORTHO05D008547 7.3e-77 291.6 202 71.3
MSTRG.7831 Avicennia marina HOM05D006025 ORTHO05D008547 1.2e-76 290.8 296 59.1
ECA246G2177 Erigeron canadensis HOM05D006025 ORTHO05D008547 9.9e-74 281.2 205 69.3
HanXRQChr17g0544581 Helianthus annuus HOM05D006025 ORTHO05D008547 2.2e-73 280.0 236 61.9
SalBow2G1916 Salvia bowleyana HOM05D006025 ORTHO05D008547 1.1e-72 277.7 277 55.2
unitig_62.g23684 Utricularia gibba HOM05D006025 ORTHO05D008547 1.9e-72 276.9 267 55.8
SEGI_16485 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 3.6e-68 262.7 277 52.3
SGA_v2.0_scaffold87G26972 Striga asiatica HOM05D006025 ORTHO05D008547 4.8e-68 262.3 319 49.2
Zm00001eb212770 Zea mays HOM05D006025 ORTHO05D008547 4.5e-66 255.8 199 63.8
AagrBONN_evm.TU.Sc2ySwM_117.678 Anthoceros agrestis HOM05D006025 ORTHO05D008547 6.7e-62 241.9 254 49.6
CBR_g39595 Chara braunii HOM05D006025 ORTHO05D008547 1.4e-59 234.2 200 56.5
Mapoly0001s0092 Marchantia polymorpha HOM05D006025 ORTHO05D008547 1.3e-57 227.6 313 44.4
SMO147G0037 Selaginella moellendorffii HOM05D006025 ORTHO05D008547 3.5e-55 219.5 211 51.2
HPP92_018837 Vanilla planifolia HOM05D006025 ORTHO05D008547 3.0e-54 216.5 150 74.0
Pp3c22_2360 Physcomitrium patens HOM05D006025 ORTHO05D008547 3.4e-50 203.0 201 52.2
CDE07G0470 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 7.6e-50 201.8 176 58.0
Glyma.02G024100 Glycine max HOM05D006025 ORTHO05D008547 4.5e-34 149.4 211 46.4
CDE06G2488 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 1.7e-33 147.5 177 47.5
SEGI_34054 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 9.4e-32 141.7 110 64.5
Solyc05g006965.1 Solanum lycopersicum HOM05D006025 ORTHO05D008547 1.4e-27 127.9 177 44.1
Hma1.2p1_0808F.1_g221580 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 1.8e-19 100.9 74 63.5
Hma1.2p1_0513F.1_g169540 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 4.1e-19 99.8 92 55.4
DCAR_001229 Daucus carota HOM05D006025 ORTHO05D008547 3.1e-11 73.6 50 76.0
Zm00001eb151370 Zea mays HOM05D006025 ORTHO05D443914 1.0e-09 68.6 54 63.0
Dinv16285 Davidia involucrata HOM05D000027 ORTHO05D000500 3.6e-07 60.1 38 84.2


User provided reference genes

Program Settings