Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc72.14 Carica papaya HOM05D004165 ORTHO05D005063 9.6e-158 560.1 273 100.0
QL06p031619 Quercus lobata HOM05D004165 ORTHO05D005063 2.3e-103 379.4 247 72.5
Haze_25068 Corylus avellana HOM05D004165 ORTHO05D005063 4.8e-101 371.7 245 72.7
Prupe.6G168600 Prunus persica HOM05D004165 ORTHO05D005063 4.5e-99 365.2 247 70.9
Potri.007G078650 Populus trichocarpa HOM05D004165 ORTHO05D005063 7.7e-99 364.4 247 70.4
Cfa002775 Carpinus fangiana HOM05D004165 ORTHO05D005063 1.0e-98 364.0 245 70.6
CiPaw.03G132500 Carya illinoinensis HOM05D004165 ORTHO05D005063 1.0e-98 364.0 245 71.8
Atru.chr4.460 Acer truncatum HOM05D004165 ORTHO05D005063 3.8e-98 362.1 251 69.7
Dinv21242 Davidia involucrata HOM05D004165 ORTHO05D005063 8.5e-98 360.9 247 71.7
RcHm_v2.0_Chr2g0117761 Rosa chinensis HOM05D004165 ORTHO05D005063 8.5e-98 360.9 251 67.3
Sabra05G0071000 Salix brachista HOM05D004165 ORTHO05D005063 1.1e-97 360.5 252 69.0
TAR628G1404 Trochodendron aralioides HOM05D004165 ORTHO05D005063 1.9e-97 359.8 247 69.2
FvH4_1g23050 Fragaria vesca HOM05D004165 ORTHO05D005063 3.2e-97 359.0 251 66.9
COL.COLO4_22364 Corchorus olitorius HOM05D004165 ORTHO05D005063 1.6e-96 356.7 263 66.2
Gohir.A12G083100 Gossypium hirsutum HOM05D004165 ORTHO05D005063 1.6e-96 356.7 245 69.0
Thecc.01G115900 Theobroma cacao HOM05D004165 ORTHO05D005063 1.6e-96 356.7 247 69.6
Gorai.008G100800 Gossypium raimondii HOM05D004165 ORTHO05D005063 2.1e-96 356.3 245 68.6
FAN26G2965 Fragaria x ananassa HOM05D004165 ORTHO05D005063 2.7e-96 355.9 251 66.9
Gohir.D12G093100 Gossypium hirsutum HOM05D004165 ORTHO05D005063 2.7e-96 355.9 245 68.2
Duzib147G0774 Durio zibethinus HOM05D004165 ORTHO05D005063 4.7e-96 355.1 246 67.5
FAN19G2841 Fragaria x ananassa HOM05D004165 ORTHO05D005063 6.1e-96 354.8 251 66.1
Actinidia28449 Actinidia chinensis HOM05D004165 ORTHO05D005063 3.0e-95 352.4 246 68.7
Potri.005G086100 Populus trichocarpa HOM05D004165 ORTHO05D005063 4.0e-95 352.1 248 69.0
FAN28G2110 Fragaria x ananassa HOM05D004165 ORTHO05D005063 6.7e-95 351.3 252 67.1
CANSAT01G1143 Cannabis sativa HOM05D004165 ORTHO05D005063 1.2e-94 350.5 251 65.3
Ciclev10024679m.g Citrus clementina HOM05D004165 ORTHO05D005063 2.6e-94 349.4 245 69.4
FAN23G0468 Fragaria x ananassa HOM05D004165 ORTHO05D005063 7.5e-94 347.8 251 65.7
CSS0013219 Camellia sinensis var. sinensis HOM05D004165 ORTHO05D005063 9.7e-94 347.4 246 69.9
THA.LOC104804480 Tarenaya hassleriana HOM05D004165 ORTHO05D005063 2.2e-93 346.3 251 66.5
Aa31LG6G15850 Aethionema arabicum HOM05D004165 ORTHO05D005063 1.8e-92 343.2 247 66.0
Manes.12G144600 Manihot esculenta HOM05D004165 ORTHO05D005063 1.2e-91 340.5 247 68.4
A01p00380 Brassica napus HOM05D004165 ORTHO05D005063 1.6e-91 340.1 247 64.8
C01p00530 Brassica napus HOM05D004165 ORTHO05D005063 1.6e-91 340.1 247 64.4
BraA01t00046Z Brassica rapa HOM05D004165 ORTHO05D005063 1.6e-91 340.1 247 64.8
Aqoxy5G02023 Aquilegia oxysepala HOM05D004165 ORTHO05D005063 2.0e-91 339.7 247 64.4
BolC1t00056H Brassica oleracea HOM05D004165 ORTHO05D005063 2.0e-91 339.7 247 64.4
Thhalv10024179m.g Eutrema salsugineum HOM05D004165 ORTHO05D005063 2.7e-91 339.3 247 65.2
Lj4C863G6 Lonicera japonica HOM05D004165 ORTHO05D005063 2.7e-91 339.3 247 68.0
AT4G39420 Arabidopsis thaliana HOM05D004165 ORTHO05D005063 3.8e-90 335.5 247 64.4
Nn5g28841 Nelumbo nucifera HOM05D004165 ORTHO05D005063 3.8e-90 335.5 247 64.0
MD15G1330600 Malus domestica HOM05D004165 ORTHO05D005063 5.0e-90 335.1 245 63.3
ClCG01G015940 Citrullus lanatus HOM05D004165 ORTHO05D005063 8.5e-90 334.3 245 66.1
Glyma.05G185300 Glycine max HOM05D004165 ORTHO05D005063 8.5e-90 334.3 241 66.8
Glyma.08G143200 Glycine max HOM05D004165 ORTHO05D005063 8.5e-90 334.3 241 66.0
AL7G11450 Arabidopsis lyrata HOM05D004165 ORTHO05D005063 1.5e-89 333.6 247 64.4
Carub.0007s0134 Capsella rubella HOM05D004165 ORTHO05D005063 1.9e-89 333.2 247 64.4
MELO3C007461.2 Cucumis melo HOM05D004165 ORTHO05D005063 1.6e-88 330.1 245 65.3
CsaV3_6G042210 Cucumis sativus L. HOM05D004165 ORTHO05D005063 2.7e-88 329.3 245 64.9
PSO210G1143 Papaver somniferum HOM05D004165 ORTHO05D005063 8.0e-88 327.8 247 61.9
arahy.Tifrunner.gnm1.ann1.F6TX6D Arachis hypogaea HOM05D004165 ORTHO05D005063 1.4e-87 327.0 241 65.6
Sed0015867 Sechium edule HOM05D004165 ORTHO05D005063 1.4e-87 327.0 245 64.1
Lj4g0014922 Lotus japonicus HOM05D004165 ORTHO05D005063 1.8e-87 326.6 246 63.8
PSO170G0015 Papaver somniferum HOM05D004165 ORTHO05D005063 1.8e-87 326.6 247 61.5
CARHR247290 Cardamine hirsuta HOM05D004165 ORTHO05D005063 2.3e-87 326.2 247 64.0
arahy.Tifrunner.gnm1.ann1.KAY7L7 Arachis hypogaea HOM05D004165 ORTHO05D005063 4.0e-87 325.5 241 65.1
Sp7g36440 Schrenkiella parvula HOM05D004165 ORTHO05D005063 5.2e-87 325.1 247 63.2
Phvul.002G266300 Phaseolus vulgaris HOM05D004165 ORTHO05D005063 6.8e-87 324.7 241 65.6
HanXRQChr08g0218061 Helianthus annuus HOM05D004165 ORTHO05D005063 1.2e-86 323.9 247 63.6
Lalb_Chr13g0296271 Lupinus albus HOM05D004165 ORTHO05D005063 1.5e-86 323.6 240 65.0
Ca_17683_v3 Cicer arietinum L. HOM05D004165 ORTHO05D005063 3.7e-85 318.9 246 63.8
Psat7g050200 Pisum sativum HOM05D004165 ORTHO05D005063 6.3e-85 318.2 241 63.5
VMungo0251G1264 Vigna mungo HOM05D004165 ORTHO05D005063 1.1e-84 317.4 241 65.1
vmacro12886 Vaccinium macrocarpon HOM05D004165 ORTHO05D005063 1.4e-84 317.0 317 53.0
TPR.G2248 Trifolium pratense HOM05D004165 ORTHO05D005063 2.4e-84 316.2 240 64.2
Medtr8g092100 Medicago truncatula HOM05D004165 ORTHO05D005063 7.0e-84 314.7 241 63.5
Nitab4.5_0009050g0010 Nicotiana tabacum HOM05D004165 ORTHO05D005063 7.7e-83 311.2 248 62.5
Nitab4.5_0000184g0120 Nicotiana tabacum HOM05D004165 ORTHO05D005063 3.8e-82 308.9 246 63.4
Solyc04g051570.4 Solanum lycopersicum HOM05D004165 ORTHO05D005063 1.1e-81 307.4 245 62.4
Sopen04g022920 Solanum pennellii HOM05D004165 ORTHO05D005063 2.5e-81 306.2 245 62.0
Hma1.2p1_0134F.1_g061540 Hydrangea macrophylla HOM05D004165 ORTHO05D005063 4.2e-81 305.4 259 61.8
Sc03g0004750 Simmondsia chinensis HOM05D004165 ORTHO05D005063 5.5e-81 305.1 251 59.8
DCAR_016674 Daucus carota HOM05D004165 ORTHO05D005063 2.8e-80 302.8 245 59.2
Oeu054941.1 Olea europaea HOM05D004165 ORTHO05D005063 3.6e-80 302.4 247 58.3
SGA_v2.0_scaffold2G01283 Striga asiatica HOM05D004165 ORTHO05D005063 6.1e-80 301.6 251 58.6
Cc07_g16560 Coffea canephora HOM05D004165 ORTHO05D005063 1.4e-79 300.4 251 61.0
Peaxi162Scf00702g00611 Petunia axillaris HOM05D004165 ORTHO05D005063 2.3e-79 299.7 255 60.4
SalBow6G1439 Salvia bowleyana HOM05D004165 ORTHO05D005063 4.0e-79 298.9 247 59.9
ATR1120G060 Amborella trichopoda HOM05D004165 ORTHO05D005063 2.6e-78 296.2 247 61.1
Migut.H02450 Erythranthe guttata HOM05D004165 ORTHO05D005063 2.6e-78 296.2 246 58.5
MSTRG.23305 Avicennia marina HOM05D004165 ORTHO05D005063 4.4e-78 295.4 251 58.6
ECA233G2130 Erigeron canadensis HOM05D004165 ORTHO05D005063 2.8e-77 292.7 247 60.7
PGR004G2408 Punica granatum HOM05D004165 ORTHO05D005063 2.8e-77 292.7 246 60.2
AUR62003622 Chenopodium quinoa HOM05D004165 ORTHO05D005063 1.2e-75 287.3 251 56.2
EL10Ac6g15255 Beta vulgaris HOM05D004165 ORTHO05D005063 5.9e-75 285.0 247 54.7
AUR62017931 Chenopodium quinoa HOM05D004165 ORTHO05D005063 1.7e-74 283.5 251 55.8
CDE07G1357 Ceratophyllum demersum HOM05D004165 ORTHO05D005063 3.3e-73 279.3 248 55.6
SEGI_01323 Sequoiadendron giganteum HOM05D004165 ORTHO05D005063 4.4e-70 268.9 248 54.8
Lsat_1_v5_gn_9_57180 Lactuca sativa HOM05D004165 ORTHO05D005063 7.5e-70 268.1 247 57.9
HPP92_013330 Vanilla planifolia HOM05D004165 ORTHO05D005063 8.3e-69 264.6 245 54.7
HPP92_013326 Vanilla planifolia HOM05D004165 ORTHO05D005063 3.2e-68 262.7 245 54.3
Zm00001eb062420 Zea mays HOM05D004165 ORTHO05D005063 1.5e-65 253.8 248 54.4
unitig_899.g14615 Utricularia gibba HOM05D004165 ORTHO05D005063 4.4e-62 242.3 247 51.8
Mapoly0066s0021 Marchantia polymorpha HOM05D004165 ORTHO05D005063 6.6e-58 228.4 254 47.2
Eucgr.I00310 Eucalyptus grandis HOM05D004165 ORTHO05D005063 7.3e-57 224.9 177 62.7
GSVIVG01022256001 Vitis vinifera HOM05D004165 ORTHO05D005063 2.0e-54 216.9 134 77.6
SHI11786 Sapria himalayana HOM05D004165 ORTHO05D005063 9.2e-52 208.0 251 46.2
Pp3c3_30110 Physcomitrium patens HOM05D004165 ORTHO05D005063 4.4e-38 162.5 256 37.5
Pp3c7_14700 Physcomitrium patens HOM05D004165 ORTHO05D005063 3.2e-36 156.4 253 38.7
Pp3c10_13600 Physcomitrium patens HOM05D004165 ORTHO05D005063 6.0e-35 152.1 272 36.0
SMO116G0288 Selaginella moellendorffii HOM05D004165 ORTHO05D005063 1.9e-28 130.6 194 39.2
GSVIVG01022255001 Vitis vinifera HOM05D004165 ORTHO05D005063 7.1e-20 102.1 74 59.5
Sabra16G0108800 Salix brachista HOM05D000241 ORTHO05D001001 1.3e-16 91.3 74 59.5


User provided reference genes

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