Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc71.65 Carica papaya HOM05D007134 ORTHO05D009004 2.8e-66 255.0 117 100.0
CiPaw.11G091800 Carya illinoinensis HOM05D007134 ORTHO05D009004 7.7e-40 167.2 87 79.3
Duzib205G1618 Durio zibethinus HOM05D007134 ORTHO05D009004 1.7e-39 166.0 89 75.3
Thecc.03G230400 Theobroma cacao HOM05D007134 ORTHO05D009004 3.8e-39 164.9 89 76.4
COL.COLO4_17065 Corchorus olitorius HOM05D007134 ORTHO05D009004 6.6e-39 164.1 89 73.0
Gohir.D12G211900 Gossypium hirsutum HOM05D007134 ORTHO05D009004 6.6e-39 164.1 87 74.7
Gorai.008G227500 Gossypium raimondii HOM05D007134 ORTHO05D009004 6.6e-39 164.1 87 74.7
QL12p006104 Quercus lobata HOM05D007134 ORTHO05D009004 8.6e-39 163.7 87 77.0
Atru.chr6.1744 Acer truncatum HOM05D007134 ORTHO05D009004 1.5e-38 162.9 87 78.2
GSVIVG01013189001 Vitis vinifera HOM05D007134 ORTHO05D009004 1.5e-38 162.9 87 77.0
TAR629G3531 Trochodendron aralioides HOM05D007134 ORTHO05D009004 3.3e-38 161.8 87 73.6
Haze_08260 Corylus avellana HOM05D007134 ORTHO05D009004 1.6e-37 159.5 90 73.3
Hma1.2p1_0991F.1_g244990 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 4.7e-37 157.9 87 74.7
Hma1.2p1_2785F.1_g328490 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 4.7e-37 157.9 87 74.7
Cfa012416 Carpinus fangiana HOM05D007134 ORTHO05D009004 1.4e-36 156.4 102 65.7
Dinv28939 Davidia involucrata HOM05D007134 ORTHO05D009004 1.4e-36 156.4 91 69.2
Potri.001G144000 Populus trichocarpa HOM05D007134 ORTHO05D009004 1.8e-36 156.0 90 68.9
PGR042G2424 Punica granatum HOM05D007134 ORTHO05D009004 3.0e-36 155.2 89 71.9
Sed0020644 Sechium edule HOM05D007134 ORTHO05D009004 3.0e-36 155.2 87 71.3
ClCG10G001760 Citrullus lanatus HOM05D007134 ORTHO05D009004 4.0e-36 154.8 87 70.1
FAN13G3184 Fragaria x ananassa HOM05D007134 ORTHO05D009004 4.0e-36 154.8 87 74.7
RcHm_v2.0_Chr7g0209231 Rosa chinensis HOM05D007134 ORTHO05D009004 4.0e-36 154.8 87 74.7
FAN04G0135 Fragaria x ananassa HOM05D007134 ORTHO05D009004 5.2e-36 154.5 87 74.7
Sabra01G0112400 Salix brachista HOM05D007134 ORTHO05D009004 5.2e-36 154.5 90 67.8
FvH4_5g21740 Fragaria vesca HOM05D007134 ORTHO05D009004 6.8e-36 154.1 87 73.6
FAN18G1678 Fragaria x ananassa HOM05D007134 ORTHO05D009004 6.8e-36 154.1 87 73.6
Manes.15G172000 Manihot esculenta HOM05D007134 ORTHO05D009004 6.8e-36 154.1 89 71.9
Nn6g33621 Nelumbo nucifera HOM05D007134 ORTHO05D009004 1.5e-35 152.9 87 71.3
Actinidia03384 Actinidia chinensis HOM05D007134 ORTHO05D009004 3.4e-35 151.8 89 69.7
Ca_22068_v3 Cicer arietinum L. HOM05D007134 ORTHO05D009004 7.5e-35 150.6 90 67.8
Ciclev10032247m.g Citrus clementina HOM05D007134 ORTHO05D009004 7.5e-35 150.6 87 73.6
MD06G1032400 Malus domestica HOM05D007134 ORTHO05D009004 7.5e-35 150.6 87 72.4
FAN08G2031 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.3e-34 149.8 87 71.3
CSS0021568 Camellia sinensis var. sinensis HOM05D007134 ORTHO05D009004 2.2e-34 149.1 84 70.2
MELO3C013860.2 Cucumis melo HOM05D007134 ORTHO05D009004 2.2e-34 149.1 87 67.8
THA.LOC104814437 Tarenaya hassleriana HOM05D007134 ORTHO05D009004 2.2e-34 149.1 86 73.3
AL457U10010 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 2.8e-34 148.7 90 68.9
AL4G31350 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 2.8e-34 148.7 90 68.9
A03p19520 Brassica napus HOM05D007134 ORTHO05D009004 3.7e-34 148.3 90 68.9
BolC3t14673H Brassica oleracea HOM05D007134 ORTHO05D009004 3.7e-34 148.3 90 68.9
BraA03t11205Z Brassica rapa HOM05D007134 ORTHO05D009004 3.7e-34 148.3 90 68.9
Lj4g0007831 Lotus japonicus HOM05D007134 ORTHO05D009004 6.3e-34 147.5 89 66.3
AT2G35320 Arabidopsis thaliana HOM05D007134 ORTHO05D009004 8.3e-34 147.1 90 67.8
C03p22750 Brassica napus HOM05D007134 ORTHO05D009004 8.3e-34 147.1 90 68.9
Eucgr.E00292 Eucalyptus grandis HOM05D007134 ORTHO05D009004 8.3e-34 147.1 93 63.4
Glyma.05G112400 Glycine max HOM05D007134 ORTHO05D009004 8.3e-34 147.1 87 69.0
Prupe.5G039700 Prunus persica HOM05D007134 ORTHO05D009004 8.3e-34 147.1 87 69.0
Thhalv10016981m.g Eutrema salsugineum HOM05D007134 ORTHO05D009004 1.1e-33 146.7 90 68.9
Glyma.17G154600 Glycine max HOM05D007134 ORTHO05D009004 1.4e-33 146.4 87 67.8
BcaC01g05731 Brassica carinata HOM05D007134 ORTHO05D009004 1.8e-33 146.0 90 67.8
TWI81G0484 Tripterygium wilfordii HOM05D007134 ORTHO05D009004 1.8e-33 146.0 87 70.1
Carub.0004s1701 Capsella rubella HOM05D007134 ORTHO05D009004 3.1e-33 145.2 89 67.4
Sp4g17520 Schrenkiella parvula HOM05D007134 ORTHO05D009004 3.1e-33 145.2 90 65.6
CANSAT21G0276 Cannabis sativa HOM05D007134 ORTHO05D009004 4.1e-33 144.8 85 70.6
Phvul.003G230000 Phaseolus vulgaris HOM05D007134 ORTHO05D009004 4.1e-33 144.8 85 68.2
Lalb_Chr05g0220571 Lupinus albus HOM05D007134 ORTHO05D009004 5.4e-33 144.4 87 67.8
VMungo0251G0669 Vigna mungo HOM05D007134 ORTHO05D009004 5.4e-33 144.4 85 67.1
Sc01g0007540 Simmondsia chinensis HOM05D007134 ORTHO05D009004 7.0e-33 144.1 89 62.9
TPR.G28658 Trifolium pratense HOM05D007134 ORTHO05D009004 9.2e-33 143.7 87 67.8
Lj8A293T18 Lonicera japonica HOM05D007134 ORTHO05D009004 1.2e-32 143.3 85 69.4
Nitab4.5_0001276g0070 Nicotiana tabacum HOM05D007134 ORTHO05D009004 1.2e-32 143.3 85 68.2
CARHR129460 Cardamine hirsuta HOM05D007134 ORTHO05D009004 2.0e-32 142.5 90 64.4
CsaV3_3G001860 Cucumis sativus L. HOM05D007134 ORTHO05D009004 2.0e-32 142.5 78 73.1
PGSC0003DMG400017530 Solanum tuberosum HOM05D007134 ORTHO05D009004 2.0e-32 142.5 85 68.2
Aa31LG9G15330 Aethionema arabicum HOM05D007134 ORTHO05D009004 3.5e-32 141.7 84 69.0
arahy.Tifrunner.gnm1.ann1.40JZG2 Arachis hypogaea HOM05D007134 ORTHO05D009004 3.5e-32 141.7 85 68.2
Solyc08g077090.3 Solanum lycopersicum HOM05D007134 ORTHO05D009004 3.5e-32 141.7 85 68.2
Sopen08g025670 Solanum pennellii HOM05D007134 ORTHO05D009004 3.5e-32 141.7 84 69.0
Psat4g079040 Pisum sativum HOM05D007134 ORTHO05D009004 5.9e-32 141.0 87 67.8
arahy.Tifrunner.gnm1.ann1.2XNM6Q Arachis hypogaea HOM05D007134 ORTHO05D009004 7.8e-32 140.6 85 67.1
Peaxi162Scf00006g04220 Petunia axillaris HOM05D007134 ORTHO05D009004 7.8e-32 140.6 85 64.7
Aqoxy3G02427 Aquilegia oxysepala HOM05D007134 ORTHO05D009004 1.0e-31 140.2 88 64.8
CAN.G1659.3 Capsicum annuum HOM05D007134 ORTHO05D009004 1.0e-31 140.2 87 67.8
Hund11255 Selenicereus undatus HOM05D007134 ORTHO05D009004 1.0e-31 140.2 86 64.0
Ah.12g054890 Amaranthus hybridus HOM05D007134 ORTHO05D009004 1.7e-31 139.4 89 64.0
vmacro00339 Vaccinium macrocarpon HOM05D007134 ORTHO05D009004 1.7e-31 139.4 86 64.0
Nitab4.5_0002931g0030 Nicotiana tabacum HOM05D007134 ORTHO05D009004 2.3e-31 139.0 85 65.9
PSO782G3567 Papaver somniferum HOM05D007134 ORTHO05D009004 3.8e-31 138.3 104 53.8
DCAR_032214 Daucus carota HOM05D007134 ORTHO05D009004 5.0e-31 137.9 91 60.4
Cc08_g02480 Coffea canephora HOM05D007134 ORTHO05D009004 1.5e-30 136.3 86 62.8
AUR62007266 Chenopodium quinoa HOM05D007134 ORTHO05D009004 2.5e-30 135.6 89 58.4
Rhsim11G0013400 Rhododendron simsii HOM05D007134 ORTHO05D009004 2.5e-30 135.6 86 62.8
CDE04G0512 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 3.3e-30 135.2 90 65.6
AUR62018733 Chenopodium quinoa HOM05D007134 ORTHO05D009004 9.5e-30 133.7 89 57.3
SGA_v2.0_scaffold34G13941 Striga asiatica HOM05D007134 ORTHO05D009004 1.2e-29 133.3 89 64.0
PSO063G6706 Papaver somniferum HOM05D007134 ORTHO05D009004 1.6e-29 132.9 99 54.5
CDE12G0960 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 3.6e-29 131.7 88 63.6
Oeu036071.3 Olea europaea HOM05D007134 ORTHO05D009004 3.6e-29 131.7 86 62.8
HanXRQChr06g0178411 Helianthus annuus HOM05D007134 ORTHO05D009004 6.1e-29 131.0 89 62.9
EL10Ac5g12144 Beta vulgaris HOM05D007134 ORTHO05D009004 8.0e-29 130.6 85 62.4
Os06g0110100 Oryza sativa ssp. japonica HOM05D007134 ORTHO05D009004 8.0e-29 130.6 79 69.6
Zm00001eb417090 Zea mays HOM05D007134 ORTHO05D009004 1.4e-28 129.8 79 68.4
MSTRG.6669 Avicennia marina HOM05D007134 ORTHO05D009004 1.2e-27 126.7 84 61.9
SalBow7G1996 Salvia bowleyana HOM05D007134 ORTHO05D009004 1.2e-27 126.7 87 60.9
SalBow7G3039 Salvia bowleyana HOM05D007134 ORTHO05D009004 1.2e-27 126.7 89 58.4
Lsat_1_v5_gn_6_64760 Lactuca sativa HOM05D007134 ORTHO05D009004 4.4e-27 124.8 84 61.9
ECA233G0754 Erigeron canadensis HOM05D007134 ORTHO05D009004 2.2e-26 122.5 81 63.0
Migut.M00165 Erythranthe guttata HOM05D007134 ORTHO05D009004 3.2e-25 118.6 76 67.1
unitig_749.g14086 Utricularia gibba HOM05D007134 ORTHO05D009004 3.2e-25 118.6 81 63.0
ATR0049G037 Amborella trichopoda HOM05D007134 ORTHO05D009004 4.1e-25 118.2 92 59.8
Gohir.A12G209200 Gossypium hirsutum HOM05D007134 ORTHO05D009004 6.8e-20 100.9 50 80.0
AagrBONN_evm.TU.Sc2ySwM_117.2263 Anthoceros agrestis HOM05D007134 ORTHO05D009004 6.4e-18 94.4 84 46.4
Pp3c2_15970 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.9e-17 92.8 79 46.8
Pp3c1_31250 Physcomitrium patens HOM05D007134 ORTHO05D009004 6.2e-13 77.8 83 43.4
Pp3c17_17110 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.3e-10 70.1 79 38.0
Pp3c2_10940 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.0e-07 60.5 68 41.2


User provided reference genes

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