Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc71.54 Carica papaya HOM05D000595 ORTHO05D004141 6.9e-75 283.9 143 100.0
CANSAT21G1418 Cannabis sativa HOM05D000595 ORTHO05D004141 7.2e-40 167.5 114 71.9
arahy.Tifrunner.gnm1.ann1.BJDV4A Arachis hypogaea HOM05D000595 ORTHO05D004141 2.1e-39 166.0 115 71.3
arahy.Tifrunner.gnm1.ann1.NQH3GN Arachis hypogaea HOM05D000595 ORTHO05D004141 2.1e-39 166.0 115 71.3
Atru.chr6.1509 Acer truncatum HOM05D000595 ORTHO05D004141 4.7e-39 164.9 114 71.1
Prupe.5G018900 Prunus persica HOM05D000595 ORTHO05D004141 1.0e-38 163.7 114 68.4
Glyma.04G123900 Glycine max HOM05D000595 ORTHO05D004141 1.4e-38 163.3 114 69.3
Ciclev10011016m.g Citrus clementina HOM05D000595 ORTHO05D004141 1.8e-38 162.9 114 70.2
CSS0032199 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D004141 2.3e-38 162.5 114 70.2
Ciclev10000152m.g Citrus clementina HOM05D000595 ORTHO05D004141 2.3e-38 162.5 114 70.2
Gohir.A02G091200 Gossypium hirsutum HOM05D000595 ORTHO05D004141 2.3e-38 162.5 113 69.0
MD00G1148100 Malus domestica HOM05D000595 ORTHO05D004141 2.3e-38 162.5 114 68.4
Manes.15G187301 Manihot esculenta HOM05D000595 ORTHO05D004141 2.3e-38 162.5 114 65.8
Lalb_Chr16g0380651 Lupinus albus HOM05D000595 ORTHO05D004141 4.0e-38 161.8 115 67.8
Dinv37419 Davidia involucrata HOM05D000595 ORTHO05D004141 5.2e-38 161.4 114 69.3
Gohir.D02G109400 Gossypium hirsutum HOM05D000595 ORTHO05D004141 6.8e-38 161.0 113 69.9
Phvul.002G127000 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 6.8e-38 161.0 114 68.4
Duzib116G0431 Durio zibethinus HOM05D000595 ORTHO05D004141 1.5e-37 159.8 113 67.3
Gorai.005G124100 Gossypium raimondii HOM05D000595 ORTHO05D004141 2.6e-37 159.1 113 69.0
THA.LOC104822230 Tarenaya hassleriana HOM05D000595 ORTHO05D004141 3.4e-37 158.7 114 66.7
TPR.G17247 Trifolium pratense HOM05D000595 ORTHO05D004141 4.4e-37 158.3 115 66.1
RcHm_v2.0_Chr7g0213911 Rosa chinensis HOM05D000595 ORTHO05D004141 5.7e-37 157.9 114 64.9
CiPaw.11G104000 Carya illinoinensis HOM05D000595 ORTHO05D004141 7.5e-37 157.5 114 65.8
QL02p060306 Quercus lobata HOM05D000595 ORTHO05D004141 9.8e-37 157.1 114 67.5
Ciclev10000404m.g Citrus clementina HOM05D000595 ORTHO05D004141 1.3e-36 156.8 114 68.4
Medtr5g026610 Medicago truncatula HOM05D000595 ORTHO05D004141 1.3e-36 156.8 115 64.3
Ah.02g117460 Amaranthus hybridus HOM05D000595 ORTHO05D004141 1.7e-36 156.4 114 66.7
TWI60G0525 Tripterygium wilfordii HOM05D000595 ORTHO05D004141 1.7e-36 156.4 114 64.9
VMungo1215G0102 Vigna mungo HOM05D000595 ORTHO05D004141 1.7e-36 156.4 114 66.7
AL3G38380 Arabidopsis lyrata HOM05D000595 ORTHO05D004141 2.2e-36 156.0 113 63.7
Duzib116G0855 Durio zibethinus HOM05D000595 ORTHO05D004141 2.2e-36 156.0 113 67.3
Carub.0003s2390 Capsella rubella HOM05D000595 ORTHO05D004141 2.8e-36 155.6 113 63.7
QL02p060347 Quercus lobata HOM05D000595 ORTHO05D004141 2.8e-36 155.6 114 67.5
Thecc.03G325300 Theobroma cacao HOM05D000595 ORTHO05D004141 2.8e-36 155.6 113 64.6
C01p40000 Brassica napus HOM05D000595 ORTHO05D004141 3.7e-36 155.2 113 61.9
FAN13G2264 Fragaria x ananassa HOM05D000595 ORTHO05D004141 4.9e-36 154.8 112 67.0
A01p31410 Brassica napus HOM05D000595 ORTHO05D004141 6.3e-36 154.5 113 61.1
BolC1t03957H Brassica oleracea HOM05D000595 ORTHO05D004141 6.3e-36 154.5 113 62.8
BraA01t03266Z Brassica rapa HOM05D000595 ORTHO05D004141 6.3e-36 154.5 113 61.1
Ca_25085_v3 Cicer arietinum L. HOM05D000595 ORTHO05D004141 6.3e-36 154.5 115 64.3
Lj8A330G11 Lonicera japonica HOM05D000595 ORTHO05D004141 6.3e-36 154.5 116 66.4
ClCG10G000900 Citrullus lanatus HOM05D000595 ORTHO05D004141 8.3e-36 154.1 114 64.0
A01p31400 Brassica napus HOM05D000595 ORTHO05D004141 1.1e-35 153.7 103 66.0
RcHm_v2.0_Chr7g0213851 Rosa chinensis HOM05D000595 ORTHO05D004141 1.1e-35 153.7 114 64.0
TAR629G2634 Trochodendron aralioides HOM05D000595 ORTHO05D004141 1.1e-35 153.7 114 66.7
AUR62007422 Chenopodium quinoa HOM05D000595 ORTHO05D004141 1.4e-35 153.3 112 65.2
Thhalv10019990m.g Eutrema salsugineum HOM05D000595 ORTHO05D004141 1.4e-35 153.3 113 61.9
Phvul.002G126900 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 1.4e-35 153.3 115 67.0
GSVIVG01022815001 Vitis vinifera HOM05D000595 ORTHO05D004141 1.4e-35 153.3 114 68.4
AUR62027310 Chenopodium quinoa HOM05D000595 ORTHO05D004141 2.4e-35 152.5 112 66.1
TPR.G39643 Trifolium pratense HOM05D000595 ORTHO05D004141 3.1e-35 152.1 108 66.7
Sp3g21350 Schrenkiella parvula HOM05D000595 ORTHO05D004141 4.1e-35 151.8 113 60.2
Aqoxy3G02180 Aquilegia oxysepala HOM05D000595 ORTHO05D004141 5.4e-35 151.4 114 63.2
Carub.0003s2391 Capsella rubella HOM05D000595 ORTHO05D004141 5.4e-35 151.4 113 61.1
Cfa012657 Carpinus fangiana HOM05D000595 ORTHO05D004141 5.4e-35 151.4 114 64.9
Eucgr.E01209 Eucalyptus grandis HOM05D000595 ORTHO05D004141 5.4e-35 151.4 113 61.1
Lalb_Chr09g0325191 Lupinus albus HOM05D000595 ORTHO05D004141 5.4e-35 151.4 115 64.3
Eucgr.E01212 Eucalyptus grandis HOM05D000595 ORTHO05D004141 7.0e-35 151.0 113 61.1
FvH4_5g24150 Fragaria vesca HOM05D000595 ORTHO05D004141 9.2e-35 150.6 112 65.2
PSO384G3519 Papaver somniferum HOM05D000595 ORTHO05D004141 9.2e-35 150.6 112 63.4
PGR042G2013 Punica granatum HOM05D000595 ORTHO05D004141 9.2e-35 150.6 113 62.8
C01p39990 Brassica napus HOM05D000595 ORTHO05D004141 1.2e-34 150.2 113 61.1
Lj8A331G39 Lonicera japonica HOM05D000595 ORTHO05D004141 1.2e-34 150.2 116 64.7
Psat2g142920 Pisum sativum HOM05D000595 ORTHO05D004141 1.2e-34 150.2 115 63.5
Sp3g21340 Schrenkiella parvula HOM05D000595 ORTHO05D004141 1.2e-34 150.2 113 61.1
GSVIVG01036947001 Vitis vinifera HOM05D000595 ORTHO05D004141 1.2e-34 150.2 104 72.1
AT3G23640 Arabidopsis thaliana HOM05D000595 ORTHO05D004141 1.6e-34 149.8 113 61.1
Cfa012654 Carpinus fangiana HOM05D000595 ORTHO05D004141 2.7e-34 149.1 104 68.3
CsaV3_3G000980 Cucumis sativus L. HOM05D000595 ORTHO05D004141 2.7e-34 149.1 114 61.4
HanXRQChr17g0537211 Helianthus annuus HOM05D000595 ORTHO05D004141 2.7e-34 149.1 114 62.3
Sc07g0008260 Simmondsia chinensis HOM05D000595 ORTHO05D004141 3.5e-34 148.7 114 63.2
COL.COLO4_24689 Corchorus olitorius HOM05D000595 ORTHO05D004141 4.5e-34 148.3 111 62.2
PSO384G3949 Papaver somniferum HOM05D000595 ORTHO05D004141 5.9e-34 147.9 114 64.0
PSO782G2105 Papaver somniferum HOM05D000595 ORTHO05D004141 5.9e-34 147.9 114 61.4
Peaxi162Scf00053g00618 Petunia axillaris HOM05D000595 ORTHO05D004141 7.8e-34 147.5 114 60.5
Actinidia32782 Actinidia chinensis HOM05D000595 ORTHO05D004141 1.0e-33 147.1 114 64.0
TPR.G17274 Trifolium pratense HOM05D000595 ORTHO05D004141 1.0e-33 147.1 111 64.0
Psat2g142760 Pisum sativum HOM05D000595 ORTHO05D004141 1.3e-33 146.7 115 62.6
EL10Ac5g11905 Beta vulgaris HOM05D000595 ORTHO05D004141 1.7e-33 146.4 105 62.9
Solyc08g075530.3 Solanum lycopersicum HOM05D000595 ORTHO05D004141 1.7e-33 146.4 114 59.6
Rhsim11G0034700 Rhododendron simsii HOM05D000595 ORTHO05D004141 2.3e-33 146.0 112 62.5
Sopen08g024190 Solanum pennellii HOM05D000595 ORTHO05D004141 3.8e-33 145.2 114 58.8
Sed0017541 Sechium edule HOM05D000595 ORTHO05D004141 5.0e-33 144.8 114 60.5
MELO3C013786.2 Cucumis melo HOM05D000595 ORTHO05D004141 6.6e-33 144.4 114 60.5
Lj2g0003822 Lotus japonicus HOM05D000595 ORTHO05D004141 6.6e-33 144.4 116 61.2
Potri.001G129600 Populus trichocarpa HOM05D000595 ORTHO05D004141 8.6e-33 144.1 114 62.3
Aa31LG10G5270 Aethionema arabicum HOM05D000595 ORTHO05D004141 1.1e-32 143.7 113 58.4
Nitab4.5_0000985g0070 Nicotiana tabacum HOM05D000595 ORTHO05D004141 1.1e-32 143.7 114 58.8
Zm00001eb305980 Zea mays HOM05D000595 ORTHO05D004141 1.5e-32 143.3 112 61.6
DCAR_004519 Daucus carota HOM05D000595 ORTHO05D004141 1.9e-32 142.9 114 62.3
Hund14328 Selenicereus undatus HOM05D000595 ORTHO05D004141 1.9e-32 142.9 114 60.5
ECA246G0927 Erigeron canadensis HOM05D000595 ORTHO05D004141 2.5e-32 142.5 114 59.6
CAN.G1731.4 Capsicum annuum HOM05D000595 ORTHO05D004141 3.3e-32 142.1 114 57.0
Nitab4.5_0000030g0360 Nicotiana tabacum HOM05D000595 ORTHO05D004141 3.3e-32 142.1 114 57.9
ECA246G1180 Erigeron canadensis HOM05D000595 ORTHO05D004141 7.3e-32 141.0 112 61.6
Nn1g02038 Nelumbo nucifera HOM05D000595 ORTHO05D004141 9.5e-32 140.6 114 57.9
Zm00001eb096920 Zea mays HOM05D000595 ORTHO05D004141 1.2e-31 140.2 112 59.8
Migut.E01361 Erythranthe guttata HOM05D000595 ORTHO05D004141 6.1e-31 137.9 114 57.0
Sabra01G0099900 Salix brachista HOM05D000595 ORTHO05D004141 1.4e-30 136.7 114 58.8
vmacro00079 Vaccinium macrocarpon HOM05D000595 ORTHO05D004141 1.4e-30 136.7 126 57.1
SalBow4G2071 Salvia bowleyana HOM05D000595 ORTHO05D004141 1.8e-30 136.3 114 59.6
ATR0829G165 Amborella trichopoda HOM05D000595 ORTHO05D004141 3.0e-30 135.6 104 57.7
CSS0050335 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D004141 6.8e-30 134.4 111 62.2
Manes.17G004600 Manihot esculenta HOM05D000595 ORTHO05D004141 6.8e-30 134.4 125 56.8
Os07g0420700 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D004141 6.8e-30 134.4 112 58.0
Lsat_1_v5_gn_3_23561 Lactuca sativa HOM05D000595 ORTHO05D004141 2.0e-29 132.9 114 56.1
CDE01G0028 Ceratophyllum demersum HOM05D000595 ORTHO05D004141 3.4e-29 132.1 114 51.8
MSTRG.24716 Avicennia marina HOM05D000595 ORTHO05D004141 7.5e-29 131.0 114 56.1
DCAR_004520 Daucus carota HOM05D000595 ORTHO05D004141 7.5e-29 131.0 114 56.1
Os07g0421300 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D004141 7.5e-29 131.0 112 57.1
HPP92_020874 Vanilla planifolia HOM05D000595 ORTHO05D004141 2.9e-28 129.0 114 51.8
MBI04_g21145_MAGBIO Magnolia biondii HOM05D000595 ORTHO05D004141 1.1e-27 127.1 114 57.0
Haze_07994 Corylus avellana HOM05D000595 ORTHO05D004141 1.8e-27 126.3 87 67.8
Migut.A00539 Erythranthe guttata HOM05D000595 ORTHO05D004141 3.2e-27 125.6 114 53.5
SGA_v2.0_scaffold111G31354 Striga asiatica HOM05D000595 ORTHO05D004141 3.2e-27 125.6 104 58.7
CSS0006745 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D004141 2.0e-26 122.9 111 55.9
BcaB04g20431 Brassica carinata HOM05D000595 ORTHO05D004141 5.6e-24 114.8 80 63.8
BcaB04g20429 Brassica carinata HOM05D000595 ORTHO05D004141 2.1e-23 112.8 113 49.6
Oeu042206.1 Olea europaea HOM05D000595 ORTHO05D004141 6.2e-23 111.3 92 54.3
Cc08_g05420 Coffea canephora HOM05D000595 ORTHO05D004141 5.2e-22 108.2 81 63.0
Ca_25052_v3 Cicer arietinum L. HOM05D002908 ORTHO05D009379 6.8e-22 107.8 75 66.7
Oeu042200.2 Olea europaea HOM05D000595 ORTHO05D004141 6.8e-22 107.8 86 57.0
Oeu042228.5 Olea europaea HOM05D000595 ORTHO05D004141 8.9e-22 107.5 86 58.1
GSVIVG01013642001 Vitis vinifera HOM05D000595 ORTHO05D004141 7.5e-21 104.4 84 63.1
Pp3c16_2470 Physcomitrium patens HOM05D000595 ORTHO05D004141 1.1e-19 100.5 114 45.6
Oeu042205.1 Olea europaea HOM05D000595 ORTHO05D004141 5.4e-19 98.2 99 49.5
Oeu042195.1 Olea europaea HOM05D000595 ORTHO05D004141 9.2e-19 97.4 71 63.4
SGA_v2.0_scaffold89G27418 Striga asiatica HOM05D000595 ORTHO05D004141 3.0e-17 92.4 87 49.4
Pp3c3_9200 Physcomitrium patens HOM05D000595 ORTHO05D004141 1.5e-16 90.1 118 40.7
Pp3c5_4460 Physcomitrium patens HOM05D000595 ORTHO05D004141 2.5e-16 89.4 112 40.2
SMO116G0166 Selaginella moellendorffii HOM05D000595 ORTHO05D004141 2.5e-16 89.4 100 46.0
Pp3c13_11140 Physcomitrium patens HOM05D000595 ORTHO05D004141 3.3e-16 89.0 116 37.9
AagrBONN_evm.TU.Sc2ySwM_344.2687 Anthoceros agrestis HOM05D000595 ORTHO05D004141 7.3e-16 87.8 122 36.9
Mapoly0135s0001 Marchantia polymorpha HOM05D000595 ORTHO05D004141 3.6e-15 85.5 109 39.4
Mapoly0633s0002 Marchantia polymorpha HOM05D000595 ORTHO05D004141 1.1e-14 84.0 109 39.4
Pp3c4_24030 Physcomitrium patens HOM05D000595 ORTHO05D004141 1.8e-14 83.2 116 37.9
Oeu042203.1 Olea europaea HOM05D000595 ORTHO05D004141 1.2e-13 80.5 76 48.7
AagrBONN_evm.TU.Sc2ySwM_228.2586 Anthoceros agrestis HOM05D000595 ORTHO05D004141 2.9e-12 75.9 90 42.2
CARHR099600 Cardamine hirsuta HOM05D000595 ORTHO05D004141 2.8e-07 59.3 53 52.8


User provided reference genes

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