Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc71.30 Carica papaya HOM05D006262 ORTHO05D007266 3.1e-44 181.4 92 100.0
A03p24130 Brassica napus HOM05D006262 ORTHO05D007266 1.2e-30 136.3 86 81.4
BraA03t11623Z Brassica rapa HOM05D006262 ORTHO05D007266 1.2e-30 136.3 86 81.4
AL4G41890 Arabidopsis lyrata HOM05D006262 ORTHO05D007266 1.5e-30 136.0 86 81.4
AT2G43235 Arabidopsis thaliana HOM05D006262 ORTHO05D007266 1.5e-30 136.0 86 81.4
GSVIVG01013579001 Vitis vinifera HOM05D006262 ORTHO05D007266 1.5e-30 136.0 86 79.1
BcaC01g05249 Brassica carinata HOM05D006262 ORTHO05D007266 2.6e-30 135.2 86 81.4
BolC3t15234H Brassica oleracea HOM05D006262 ORTHO05D007266 2.6e-30 135.2 86 80.2
Sp4g25360 Schrenkiella parvula HOM05D006262 ORTHO05D007266 2.6e-30 135.2 86 80.2
BcaB01g03403 Brassica carinata HOM05D006262 ORTHO05D007266 1.3e-29 132.9 86 80.2
C03p28720 Brassica napus HOM05D006262 ORTHO05D007266 2.2e-29 132.1 86 79.1
Carub.0004s2570 Capsella rubella HOM05D006262 ORTHO05D007266 2.2e-29 132.1 86 79.1
Cfa015775 Carpinus fangiana HOM05D006262 ORTHO05D007266 3.7e-29 131.3 86 80.2
COL.COLO4_14416 Corchorus olitorius HOM05D006262 ORTHO05D007266 3.7e-29 131.3 85 78.8
Thhalv10001453m.g Eutrema salsugineum HOM05D006262 ORTHO05D007266 6.3e-29 130.6 86 79.1
Aa31LG1G25040 Aethionema arabicum HOM05D006262 ORTHO05D007266 8.2e-29 130.2 87 78.2
FvH4_4g11340 Fragaria vesca HOM05D006262 ORTHO05D007266 8.2e-29 130.2 86 77.9
Gorai.012G119900 Gossypium raimondii HOM05D006262 ORTHO05D007266 8.2e-29 130.2 85 76.5
RcHm_v2.0_Chr4g0407651 Rosa chinensis HOM05D006262 ORTHO05D007266 8.2e-29 130.2 86 77.9
Thecc.05G002700 Theobroma cacao HOM05D006262 ORTHO05D007266 1.1e-28 129.8 85 77.6
CARHR138310 Cardamine hirsuta HOM05D006262 ORTHO05D007266 1.4e-28 129.4 86 77.9
Prupe.1G187900 Prunus persica HOM05D006262 ORTHO05D007266 1.4e-28 129.4 86 77.9
Rhsim09G0030700 Rhododendron simsii HOM05D006262 ORTHO05D007266 1.4e-28 129.4 85 76.5
Manes.04G048800 Manihot esculenta HOM05D006262 ORTHO05D007266 1.8e-28 129.0 86 76.7
Potri.007G124600 Populus trichocarpa HOM05D006262 ORTHO05D007266 2.4e-28 128.6 86 80.2
Gohir.D04G136100 Gossypium hirsutum HOM05D006262 ORTHO05D007266 7.0e-28 127.1 85 75.3
Sabra07G0100700 Salix brachista HOM05D006262 ORTHO05D002297 9.1e-28 126.7 86 77.9
vmacro00601 Vaccinium macrocarpon HOM05D006262 ORTHO05D007266 9.1e-28 126.7 82 76.8
Gohir.A04G096300 Gossypium hirsutum HOM05D006262 ORTHO05D007266 1.2e-27 126.3 85 75.3
QL10p047365 Quercus lobata HOM05D006262 ORTHO05D007266 2.0e-27 125.6 86 77.9
CSS0049911 Camellia sinensis var. sinensis HOM05D006262 ORTHO05D007266 2.7e-27 125.2 79 79.7
TAR362G0090 Trochodendron aralioides HOM05D006262 ORTHO05D007266 3.5e-27 124.8 80 81.2
Ciclev10020134m.g Citrus clementina HOM05D006262 ORTHO05D007266 4.5e-27 124.4 86 76.7
Lalb_Chr02g0144321 Lupinus albus HOM05D006262 ORTHO05D007266 4.5e-27 124.4 86 73.3
Duzib093G0344 Durio zibethinus HOM05D006262 ORTHO05D007266 5.9e-27 124.0 85 74.1
Atru.chr3.1601 Acer truncatum HOM05D006262 ORTHO05D007266 7.7e-27 123.6 86 77.9
Atru.chr3.1609 Acer truncatum HOM05D006262 ORTHO05D007266 7.7e-27 123.6 86 77.9
HanXRQChr15g0494811 Helianthus annuus HOM05D006262 ORTHO05D007266 7.7e-27 123.6 85 76.5
CANSAT78G0581 Cannabis sativa HOM05D006262 ORTHO05D007266 1.3e-26 122.9 85 75.3
Dinv22693 Davidia involucrata HOM05D006262 ORTHO05D007266 1.3e-26 122.9 86 74.4
VMungo0720G2273 Vigna mungo HOM05D006262 ORTHO05D007266 5.0e-26 120.9 88 69.3
PGSC0003DMG400021613 Solanum tuberosum HOM05D006262 ORTHO05D007266 6.5e-26 120.6 81 74.1
Hma1.2p1_0597F.1_g186420 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 1.1e-25 119.8 80 75.0
Hma1.2p1_0597F.1_g186430 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 1.1e-25 119.8 80 75.0
TWI63G1082 Tripterygium wilfordii HOM05D006262 ORTHO05D007266 1.1e-25 119.8 86 70.9
arahy.Tifrunner.gnm1.ann1.BL35NN Arachis hypogaea HOM05D006262 ORTHO05D007266 1.5e-25 119.4 86 70.9
Oeu029569.3 Olea europaea HOM05D006262 ORTHO05D007266 1.5e-25 119.4 81 74.1
arahy.Tifrunner.gnm1.ann1.6Y9ITK Arachis hypogaea HOM05D006262 ORTHO05D007266 2.5e-25 118.6 86 69.8
Glyma.20G245900 Glycine max HOM05D006262 ORTHO05D007266 2.5e-25 118.6 86 69.8
TPR.G10421 Trifolium pratense HOM05D006262 ORTHO05D007266 2.5e-25 118.6 86 72.1
Ca_29592_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 3.2e-25 118.2 88 69.3
Solyc09g098530.4 Solanum lycopersicum HOM05D006262 ORTHO05D007266 3.2e-25 118.2 81 72.8
Sopen09g036450 Solanum pennellii HOM05D006262 ORTHO05D007266 3.2e-25 118.2 81 72.8
ECA238G4140 Erigeron canadensis HOM05D000005 ORTHO05D000012 5.5e-25 117.5 86 74.4
Phvul.007G004000 Phaseolus vulgaris HOM05D006262 ORTHO05D007266 5.5e-25 117.5 86 68.6
Ca_11400_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 9.4e-25 116.7 84 71.4
Ca_11403_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 9.4e-25 116.7 84 71.4
MSTRG.24585 Avicennia marina HOM05D006262 ORTHO05D007266 1.2e-24 116.3 80 71.2
Lj3A232G38 Lonicera japonica HOM05D006262 ORTHO05D007266 2.1e-24 115.5 81 71.6
PSO675G4698 Papaver somniferum HOM05D006262 ORTHO05D007266 2.1e-24 115.5 86 64.0
Eucgr.A00253 Eucalyptus grandis HOM05D006262 ORTHO05D007266 3.6e-24 114.8 81 70.4
Nitab4.5_0002908g0080 Nicotiana tabacum HOM05D006262 ORTHO05D007266 3.6e-24 114.8 81 71.6
PSO017G4626 Papaver somniferum HOM05D006262 ORTHO05D007266 8.0e-24 113.6 86 62.8
Peaxi162Scf00286g00119 Petunia axillaris HOM05D006262 ORTHO05D007266 8.0e-24 113.6 81 70.4
Psat6g241480 Pisum sativum HOM05D006262 ORTHO05D007266 8.0e-24 113.6 86 65.1
Cc03_g13170 Coffea canephora HOM05D006262 ORTHO05D007266 1.0e-23 113.2 81 71.6
Nitab4.5_0001049g0110 Nicotiana tabacum HOM05D006262 ORTHO05D007266 1.0e-23 113.2 81 70.4
Lj5g0018354 Lotus japonicus HOM05D006262 ORTHO05D007266 1.8e-23 112.5 86 67.4
DCAR_023918 Daucus carota HOM05D006262 ORTHO05D007266 2.3e-23 112.1 86 72.1
MD04G1038000 Malus domestica HOM05D006262 ORTHO05D007266 3.0e-23 111.7 88 70.5
Migut.N03113 Erythranthe guttata HOM05D006262 ORTHO05D007266 6.8e-23 110.5 80 68.8
PGR142G3389 Punica granatum HOM05D006262 ORTHO05D007266 8.8e-23 110.2 86 69.8
Medtr1g116540 Medicago truncatula HOM05D006262 ORTHO05D007266 2.6e-22 108.6 77 71.4
Nn1g09825 Nelumbo nucifera HOM05D006262 ORTHO05D007266 9.8e-22 106.7 77 68.8
Ah.07g204100 Amaranthus hybridus HOM05D006262 ORTHO05D007266 1.7e-21 105.9 80 67.5
AUR62002605 Chenopodium quinoa HOM05D006262 ORTHO05D007266 2.2e-21 105.5 80 66.2
AUR62030023 Chenopodium quinoa HOM05D006262 ORTHO05D007266 2.2e-21 105.5 80 66.2
ClCG07G015820 Citrullus lanatus HOM05D006262 ORTHO05D007266 2.8e-21 105.1 86 62.8
EL10Ac3g06302 Beta vulgaris HOM05D006262 ORTHO05D007266 4.8e-21 104.4 81 65.4
MBI08_g33651_MAGBIO Magnolia biondii HOM05D006262 ORTHO05D007266 4.8e-21 104.4 86 62.8
Aqoxy2G04115 Aquilegia oxysepala HOM05D006262 ORTHO05D007266 1.1e-20 103.2 80 67.5
Os05g0299200 Oryza sativa ssp. japonica HOM05D006262 ORTHO05D007266 9.1e-20 100.1 88 59.1
Sc13g0007690 Simmondsia chinensis HOM05D006262 ORTHO05D007266 9.1e-20 100.1 73 69.9
ATR0743G268 Amborella trichopoda HOM05D006262 ORTHO05D007266 2.0e-19 99.0 79 65.8
MELO3C017699.2 Cucumis melo HOM05D006262 ORTHO05D007266 2.7e-19 98.6 86 60.5
Sed0004128 Sechium edule HOM05D006262 ORTHO05D007266 3.5e-19 98.2 86 60.5
Zm00001eb350760 Zea mays HOM05D006262 ORTHO05D007266 3.5e-19 98.2 88 55.7
CsaV3_4G003530 Cucumis sativus L. HOM05D006262 ORTHO05D007266 5.9e-19 97.4 86 60.5
SalBow6G1208 Salvia bowleyana HOM05D006262 ORTHO05D007266 5.9e-19 97.4 107 51.4
HPP92_024424 Vanilla planifolia HOM05D006262 ORTHO05D007266 5.9e-19 97.4 86 57.0
CDE09G0849 Ceratophyllum demersum HOM05D006262 ORTHO05D007266 1.3e-18 96.3 86 58.1
Lsat_1_v5_gn_2_51881 Lactuca sativa HOM05D006262 ORTHO05D007266 3.8e-18 94.7 86 62.8
unitig_27.g25149 Utricularia gibba HOM05D006262 ORTHO05D007266 1.9e-17 92.4 76 60.5
Hund22599 Selenicereus undatus HOM05D006262 ORTHO05D007266 3.6e-16 88.2 73 61.6
Haze_00720 Corylus avellana HOM05D006262 ORTHO05D007266 4.7e-16 87.8 57 80.7
SEGI_17174 Sequoiadendron giganteum HOM05D006262 ORTHO05D007266 7.5e-14 80.5 83 54.2
SGA_v2.0_scaffold31G12573 Striga asiatica HOM05D006262 ORTHO05D007266 8.3e-13 77.0 80 50.0
AagrBONN_evm.TU.Sc2ySwM_344.5117 Anthoceros agrestis HOM05D006262 ORTHO05D007266 4.1e-12 74.7 77 55.8
Mapoly0004s0159 Marchantia polymorpha HOM05D006262 ORTHO05D007266 1.2e-11 73.2 72 61.1
SMO351G0235 Selaginella moellendorffii HOM05D006262 ORTHO05D007266 2.7e-11 72.0 76 48.7
AagrBONN_evm.TU.Sc2ySwM_368.1862 Anthoceros agrestis HOM05D005935 ORTHO05D007012 5.9e-11 70.9 72 56.9
Pp3c12_3930 Physcomitrium patens HOM05D006262 ORTHO05D007266 2.3e-07 58.9 77 44.2
BcaC07g41819 Brassica carinata HOM05D003128 ORTHO05D024111 1.5e-06 56.2 69 52.2
QL09p046233 Quercus lobata HOM05D006262 ORTHO05D007266 1.5e-06 56.2 53 66.0


User provided reference genes

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