Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc71.16 Carica papaya HOM05D005615 ORTHO05D007558 6.3e-55 217.2 113 100.0
Aa31LG1G25060 Aethionema arabicum HOM05D005615 ORTHO05D007558 1.0e-36 156.8 99 82.8
AT2G43360 Arabidopsis thaliana HOM05D005615 ORTHO05D007558 1.7e-36 156.0 99 82.8
Dinv44241 Davidia involucrata HOM05D005615 ORTHO05D007558 2.9e-36 155.2 100 83.0
TAR362G0587 Trochodendron aralioides HOM05D005615 ORTHO05D007558 5.0e-36 154.5 100 84.0
BcaC01g05236 Brassica carinata HOM05D005615 ORTHO05D007558 1.5e-35 152.9 99 80.8
A03p24210 Brassica napus HOM05D005615 ORTHO05D007558 1.5e-35 152.9 99 80.8
BraA03t11630Z Brassica rapa HOM05D005615 ORTHO05D007558 1.5e-35 152.9 99 80.8
CARHR138440 Cardamine hirsuta HOM05D005615 ORTHO05D007558 1.9e-35 152.5 99 80.8
AL4G42040 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 2.5e-35 152.1 99 79.8
Carub.0004s2582 Capsella rubella HOM05D005615 ORTHO05D007558 2.5e-35 152.1 99 80.8
Sp4g25460 Schrenkiella parvula HOM05D005615 ORTHO05D007558 3.2e-35 151.8 99 79.8
BraA05t19360Z Brassica rapa HOM05D005615 ORTHO05D007558 4.2e-35 151.4 96 81.2
Gohir.D01G221300 Gossypium hirsutum HOM05D005615 ORTHO05D007558 4.2e-35 151.4 95 78.9
Gorai.002G267900 Gossypium raimondii HOM05D005615 ORTHO05D007558 4.2e-35 151.4 95 78.9
EL10Ac3g05574 Beta vulgaris HOM05D005615 ORTHO05D007558 5.5e-35 151.0 95 80.0
Thhalv10001495m.g Eutrema salsugineum HOM05D005615 ORTHO05D007558 5.5e-35 151.0 99 79.8
Duzib093G1513 Durio zibethinus HOM05D005615 ORTHO05D007558 7.2e-35 150.6 100 81.0
RcHm_v2.0_Chr4g0408131 Rosa chinensis HOM05D005615 ORTHO05D007558 7.2e-35 150.6 100 79.0
BcaB01g03390 Brassica carinata HOM05D005615 ORTHO05D007558 9.5e-35 150.2 99 78.8
BolC4t22075H Brassica oleracea HOM05D005615 ORTHO05D007558 9.5e-35 150.2 96 80.2
HanXRQChr14g0434901 Helianthus annuus HOM05D005615 ORTHO05D007558 9.5e-35 150.2 96 79.2
Atru.chr3.1563 Acer truncatum HOM05D005615 ORTHO05D007558 1.2e-34 149.8 99 79.8
Atru.chr3.1585 Acer truncatum HOM05D005615 ORTHO05D007558 1.2e-34 149.8 99 79.8
TWI36G1239 Tripterygium wilfordii HOM05D005615 ORTHO05D007558 1.2e-34 149.8 99 78.8
A05p03730 Brassica napus HOM05D005615 ORTHO05D007558 1.6e-34 149.4 96 80.2
C04p04420 Brassica napus HOM05D005615 ORTHO05D007558 1.6e-34 149.4 96 80.2
BcaC02g12407 Brassica carinata HOM05D005615 ORTHO05D007558 2.1e-34 149.1 96 80.2
FAN17G1451 Fragaria x ananassa HOM05D005615 ORTHO05D007558 2.1e-34 149.1 100 79.0
Thecc.05G003200 Theobroma cacao HOM05D005615 ORTHO05D007558 2.1e-34 149.1 100 80.0
Hund03143 Selenicereus undatus HOM05D005615 ORTHO05D007558 2.8e-34 148.7 95 80.0
TPR.G13757 Trifolium pratense HOM05D005615 ORTHO05D007558 2.8e-34 148.7 95 78.9
GSVIVG01010734001 Vitis vinifera HOM05D005615 ORTHO05D007558 2.8e-34 148.7 100 80.0
Ca_26061_v3 Cicer arietinum L. HOM05D005615 ORTHO05D007558 3.6e-34 148.3 95 78.9
Actinidia34618 Actinidia chinensis HOM05D005615 ORTHO05D007558 4.7e-34 147.9 100 79.0
Rhsim09G0030100 Rhododendron simsii HOM05D005615 ORTHO05D007558 4.7e-34 147.9 100 79.0
Lalb_Chr01g0001081 Lupinus albus HOM05D005615 ORTHO05D007558 6.1e-34 147.5 98 80.6
Os08g0540100 Oryza sativa ssp. japonica HOM05D005615 ORTHO05D007558 6.1e-34 147.5 97 80.4
arahy.Tifrunner.gnm1.ann1.VQKS2I Arachis hypogaea HOM05D005615 ORTHO05D007558 8.0e-34 147.1 100 78.0
BolC3t15243H Brassica oleracea HOM05D005615 ORTHO05D007558 8.0e-34 147.1 92 81.5
COL.COLO4_14419 Corchorus olitorius HOM05D005615 ORTHO05D007558 8.0e-34 147.1 100 80.0
Eucgr.A00054 Eucalyptus grandis HOM05D005615 ORTHO05D007558 8.0e-34 147.1 100 80.0
Eucgr.A00256 Eucalyptus grandis HOM05D005615 ORTHO05D007558 8.0e-34 147.1 100 80.0
Gohir.A01G231200 Gossypium hirsutum HOM05D005615 ORTHO05D007558 8.0e-34 147.1 95 77.9
Lj3g0021315 Lotus japonicus HOM05D005615 ORTHO05D007558 8.0e-34 147.1 98 80.6
Lalb_Chr03g0024511 Lupinus albus HOM05D005615 ORTHO05D007558 8.0e-34 147.1 98 80.6
Manes.04G040500 Manihot esculenta HOM05D005615 ORTHO05D007558 8.0e-34 147.1 100 79.0
PGR083G0205 Punica granatum HOM05D005615 ORTHO05D007558 8.0e-34 147.1 100 78.0
arahy.Tifrunner.gnm1.ann1.2A1XYJ Arachis hypogaea HOM05D005615 ORTHO05D007558 1.0e-33 146.7 98 78.6
Ciclev10020553m.g Citrus clementina HOM05D005615 ORTHO05D007558 1.0e-33 146.7 100 79.0
Aqoxy2G04109 Aquilegia oxysepala HOM05D005615 ORTHO05D007558 1.4e-33 146.4 98 77.6
AUR62034151 Chenopodium quinoa HOM05D005615 ORTHO05D007558 1.4e-33 146.4 96 78.1
Medtr4g076870 Medicago truncatula HOM05D005615 ORTHO05D007558 1.4e-33 146.4 98 79.6
Potri.017G033300 Populus trichocarpa HOM05D005615 ORTHO05D007558 1.8e-33 146.0 100 78.0
ATR0743G064 Amborella trichopoda HOM05D005615 ORTHO05D007558 2.3e-33 145.6 110 71.8
Lj6A60G37 Lonicera japonica HOM05D005615 ORTHO05D007558 2.3e-33 145.6 101 75.2
Prupe.1G186700 Prunus persica HOM05D005615 ORTHO05D007558 2.3e-33 145.6 100 79.0
Cfa015769 Carpinus fangiana HOM05D005615 ORTHO05D007558 3.0e-33 145.2 96 79.2
QL10p047743 Quercus lobata HOM05D005615 ORTHO05D007558 3.0e-33 145.2 100 76.0
Haze_00733 Corylus avellana HOM05D005615 ORTHO05D007558 4.0e-33 144.8 96 79.2
Oeu018049.1 Olea europaea HOM05D005615 ORTHO05D007558 4.0e-33 144.8 100 78.0
PSO675G8272 Papaver somniferum HOM05D005615 ORTHO05D007558 4.0e-33 144.8 99 76.8
Sabra17G0020900 Salix brachista HOM05D005615 ORTHO05D007558 4.0e-33 144.8 100 77.0
PSO017G2630 Papaver somniferum HOM05D005615 ORTHO05D007558 8.8e-33 143.7 99 75.8
Sc13g0007050 Simmondsia chinensis HOM05D005615 ORTHO05D007558 8.8e-33 143.7 100 75.0
Dinv22646 Davidia involucrata HOM05D005615 ORTHO05D007558 1.2e-32 143.3 100 78.0
ECA238G2991 Erigeron canadensis HOM05D005615 ORTHO05D007558 1.2e-32 143.3 97 78.4
Migut.N03069 Erythranthe guttata HOM05D005615 ORTHO05D007558 1.2e-32 143.3 97 79.4
Peaxi162Scf00375g00079 Petunia axillaris HOM05D005615 ORTHO05D007558 1.2e-32 143.3 97 73.2
unitig_736.g22473 Utricularia gibba HOM05D005615 ORTHO05D007558 1.2e-32 143.3 88 83.0
VMungo1127G1033 Vigna mungo HOM05D005615 ORTHO05D007558 1.2e-32 143.3 98 77.6
Cc03_g13240 Coffea canephora HOM05D005615 ORTHO05D007558 1.5e-32 142.9 100 77.0
Glyma.11G094200 Glycine max HOM05D005615 ORTHO05D007558 1.5e-32 142.9 98 79.6
MBI11_g35028_MAGBIO Magnolia biondii HOM05D005615 ORTHO05D007558 1.5e-32 142.9 98 78.6
ClCG08G004320 Citrullus lanatus HOM05D005615 ORTHO05D007558 2.0e-32 142.5 100 77.0
Psat7g172600 Pisum sativum HOM05D005615 ORTHO05D007558 2.0e-32 142.5 98 77.6
MELO3C011628.2 Cucumis melo HOM05D005615 ORTHO05D007558 2.6e-32 142.1 98 77.6
Sabra07G0102500 Salix brachista HOM05D005615 ORTHO05D007558 2.6e-32 142.1 102 74.5
SGA_v2.0_scaffold283G46961 Striga asiatica HOM05D005615 ORTHO05D007558 2.6e-32 142.1 98 76.5
THA.LOC104803617 Tarenaya hassleriana HOM05D005615 ORTHO05D007558 2.6e-32 142.1 97 77.3
AUR62016250 Chenopodium quinoa HOM05D005615 ORTHO05D007558 3.4e-32 141.7 86 81.4
Glyma.12G020600 Glycine max HOM05D005615 ORTHO05D007558 3.4e-32 141.7 98 75.5
MD04G1037300 Malus domestica HOM05D005615 ORTHO05D007558 3.4e-32 141.7 101 76.2
Phvul.011G023300 Phaseolus vulgaris HOM05D005615 ORTHO05D007558 3.4e-32 141.7 98 76.5
CsaV3_6G003770 Cucumis sativus L. HOM05D005615 ORTHO05D007558 4.4e-32 141.4 100 76.0
Nn7g37651 Nelumbo nucifera HOM05D005615 ORTHO05D007558 4.4e-32 141.4 95 76.8
Lsat_1_v5_gn_2_52041 Lactuca sativa HOM05D005615 ORTHO05D007558 5.7e-32 141.0 100 74.0
Potri.007G126400 Populus trichocarpa HOM05D005615 ORTHO05D007558 5.7e-32 141.0 102 74.5
SGA_v2.0_scaffold12G06187 Striga asiatica HOM05D005615 ORTHO05D007558 5.7e-32 141.0 98 76.5
CANSAT78G0163 Cannabis sativa HOM05D005615 ORTHO05D007558 1.3e-31 139.8 100 76.0
MSTRG.22029 Avicennia marina HOM05D005615 ORTHO05D007558 1.7e-31 139.4 76 92.1
CDE07G0588 Ceratophyllum demersum HOM05D005615 ORTHO05D007558 1.7e-31 139.4 84 82.1
Sed0015751 Sechium edule HOM05D005615 ORTHO05D007558 1.7e-31 139.4 100 72.0
Mapoly0041s0099 Marchantia polymorpha HOM05D005615 ORTHO05D007558 2.2e-31 139.0 100 78.0
SEGI_32939 Sequoiadendron giganteum HOM05D005615 ORTHO05D007558 2.8e-31 138.7 110 70.0
Zm00001eb037230 Zea mays HOM05D005615 ORTHO05D007558 3.7e-31 138.3 101 74.3
CiPaw.02G056100 Carya illinoinensis HOM05D005615 ORTHO05D007558 8.3e-31 137.1 95 77.9
Ciclev10024495m.g Citrus clementina HOM05D005615 ORTHO05D007558 1.1e-30 136.7 100 75.0
Zm00001eb198320 Zea mays HOM05D005615 ORTHO05D007558 1.1e-30 136.7 95 76.8
DCAR_029917 Daucus carota HOM05D005615 ORTHO05D007558 1.4e-30 136.3 84 83.3
Nitab4.5_0010690g0020 Nicotiana tabacum HOM05D005615 ORTHO05D007558 3.1e-30 135.2 95 71.6
CAN.G65.188 Capsicum annuum HOM05D005615 ORTHO05D007558 4.1e-30 134.8 95 72.6
Nitab4.5_0002368g0110 Nicotiana tabacum HOM05D005615 ORTHO05D007558 5.4e-30 134.4 95 71.6
Pp3c11_17440 Physcomitrium patens HOM05D005615 ORTHO05D007558 7.0e-30 134.0 97 75.3
Solyc06g073470.3 Solanum lycopersicum HOM05D005615 ORTHO05D007558 1.2e-29 133.3 95 70.5
Sopen06g029830 Solanum pennellii HOM05D005615 ORTHO05D007558 1.2e-29 133.3 95 70.5
PGSC0003DMG400026904 Solanum tuberosum HOM05D005615 ORTHO05D007558 1.2e-29 133.3 95 70.5
CBR_g54836 Chara braunii HOM05D005615 ORTHO05D000002 4.5e-29 131.3 98 72.4
Pp3c1_16250 Physcomitrium patens HOM05D005615 ORTHO05D007558 4.5e-29 131.3 96 75.0
SMO358G0150 Selaginella moellendorffii HOM05D005615 ORTHO05D007558 1.7e-28 129.4 77 84.4
Psat3g051440 Pisum sativum HOM05D005615 ORTHO05D031631 4.7e-26 121.3 94 70.2
AagrBONN_evm.TU.Sc2ySwM_362.1417 Anthoceros agrestis HOM05D003321 ORTHO05D005161 6.8e-25 117.5 72 79.2
AagrBONN_evm.TU.Sc2ySwM_344.4725 Anthoceros agrestis HOM05D005615 ORTHO05D007558 2.0e-24 115.9 95 62.1
HPP92_002776 Vanilla planifolia HOM05D005615 ORTHO05D007558 1.7e-23 112.8 85 74.1
CDE04G1318 Ceratophyllum demersum HOM05D005615 ORTHO05D007558 2.9e-23 112.1 80 73.8
Ciclev10024062m.g Citrus clementina HOM05D005615 ORTHO05D007558 2.7e-21 105.5 100 64.0
HPP92_028241 Vanilla planifolia HOM05D005615 ORTHO05D001525 2.1e-18 95.9 72 73.6
Zm00001eb285620 Zea mays HOM05D001443 ORTHO05D001352 2.1e-18 95.9 70 67.1
Cre06.g261150 Chlamydomonas reinhardtii HOM05D005615 ORTHO05D007558 4.0e-17 91.7 77 59.7
MCO13G117 Micromonas commoda HOM05D005615 ORTHO05D007558 4.0e-17 91.7 73 63.0
Eucgr.A00259 Eucalyptus grandis HOM05D005615 ORTHO05D007558 2.9e-15 85.5 76 63.2
SalBow8G4084 Salvia bowleyana HOM05D005615 ORTHO05D007558 6.4e-15 84.3 68 67.6
Haze_27367 Corylus avellana HOM05D005615 ORTHO05D007558 9.9e-08 60.5 53 56.6


User provided reference genes

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