Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc70.83 Carica papaya HOM05D003555 ORTHO05D004542 7.5e-164 580.5 298 100.0
Prupe.3G312200 Prunus persica HOM05D003555 ORTHO05D004542 8.3e-147 523.9 288 90.6
Thecc.04G045300 Theobroma cacao HOM05D003555 ORTHO05D004542 5.4e-146 521.2 288 89.6
Manes.04G091900 Manihot esculenta HOM05D003555 ORTHO05D004542 3.5e-145 518.5 288 89.9
TWI60G1549 Tripterygium wilfordii HOM05D003555 ORTHO05D004542 1.3e-144 516.5 288 88.5
Cfa007176 Carpinus fangiana HOM05D003555 ORTHO05D004542 1.7e-144 516.2 288 89.9
MD17G1008500 Malus domestica HOM05D003555 ORTHO05D004542 1.7e-144 516.2 288 89.6
THA.LOC104805306 Tarenaya hassleriana HOM05D003555 ORTHO05D004542 2.3e-144 515.8 288 89.6
FvH4_6g54180 Fragaria vesca HOM05D003555 ORTHO05D004542 3.9e-144 515.0 288 89.9
FAN09G3428 Fragaria x ananassa HOM05D003555 ORTHO05D004542 3.9e-144 515.0 288 89.9
FAN14G0379 Fragaria x ananassa HOM05D003555 ORTHO05D004542 3.9e-144 515.0 288 89.9
FAN05G2121 Fragaria x ananassa HOM05D003555 ORTHO05D004542 8.6e-144 513.8 288 89.9
TWI34G1938 Tripterygium wilfordii HOM05D003555 ORTHO05D004542 8.6e-144 513.8 288 88.9
MD09G1004500 Malus domestica HOM05D003555 ORTHO05D004542 1.1e-143 513.5 288 89.6
PGR083G2609 Punica granatum HOM05D003555 ORTHO05D004542 1.5e-143 513.1 290 87.9
Duzib187G1504 Durio zibethinus HOM05D003555 ORTHO05D004542 1.9e-143 512.7 288 87.8
Glyma.02G065500 Glycine max HOM05D003555 ORTHO05D004542 1.9e-143 512.7 288 88.9
Glyma.16G146600 Glycine max HOM05D003555 ORTHO05D004542 2.5e-143 512.3 288 88.5
TAR629G2425 Trochodendron aralioides HOM05D003555 ORTHO05D004542 2.5e-143 512.3 288 88.5
Duzib264G0281 Durio zibethinus HOM05D003555 ORTHO05D004542 3.3e-143 511.9 288 87.5
Ciclev10015638m.g Citrus clementina HOM05D003555 ORTHO05D004542 4.3e-143 511.5 288 89.6
FAN02G1454 Fragaria x ananassa HOM05D003555 ORTHO05D004542 4.3e-143 511.5 288 89.2
Gorai.012G082900 Gossypium raimondii HOM05D003555 ORTHO05D004542 4.3e-143 511.5 288 88.2
CANSAT64G0789 Cannabis sativa HOM05D003555 ORTHO05D004542 5.6e-143 511.1 288 88.2
Gohir.A05G334700 Gossypium hirsutum HOM05D003555 ORTHO05D004542 5.6e-143 511.1 288 88.2
QL02p062748 Quercus lobata HOM05D003555 ORTHO05D004542 1.2e-142 510.0 288 87.8
THA.LOC104825653 Tarenaya hassleriana HOM05D003555 ORTHO05D004542 1.2e-142 510.0 288 89.2
RcHm_v2.0_Chr2g0176361 Rosa chinensis HOM05D003555 ORTHO05D004542 1.6e-142 509.6 288 88.5
arahy.Tifrunner.gnm1.ann1.N4MBCZ Arachis hypogaea HOM05D003555 ORTHO05D004542 2.1e-142 509.2 288 86.8
CiPaw.04G001900 Carya illinoinensis HOM05D003555 ORTHO05D004542 2.8e-142 508.8 288 86.8
COL.COLO4_10540 Corchorus olitorius HOM05D003555 ORTHO05D004542 2.8e-142 508.8 288 87.5
Gohir.D11G067700 Gossypium hirsutum HOM05D003555 ORTHO05D004542 4.7e-142 508.1 288 87.5
Gohir.D04G073600 Gossypium hirsutum HOM05D003555 ORTHO05D004542 8.0e-142 507.3 288 88.5
Lalb_Chr14g0363981 Lupinus albus HOM05D003555 ORTHO05D004542 8.0e-142 507.3 288 86.5
VMungo0464G0001 Vigna mungo HOM05D003555 ORTHO05D004542 8.0e-142 507.3 288 86.8
arahy.Tifrunner.gnm1.ann1.HQ0MCX Arachis hypogaea HOM05D003555 ORTHO05D004542 1.4e-141 506.5 288 86.1
Gohir.A11G063400 Gossypium hirsutum HOM05D003555 ORTHO05D004542 3.1e-141 505.4 288 86.8
CsaV3_5G020170 Cucumis sativus L. HOM05D003555 ORTHO05D004542 4.0e-141 505.0 288 87.5
THA.LOC104823995 Tarenaya hassleriana HOM05D003555 ORTHO05D004542 4.0e-141 505.0 288 87.2
MELO3C025061.2 Cucumis melo HOM05D003555 ORTHO05D004542 6.8e-141 504.2 288 87.5
ClCG01G008140 Citrullus lanatus HOM05D003555 ORTHO05D004542 1.2e-140 503.4 288 87.8
Glyma.19G101000 Glycine max HOM05D003555 ORTHO05D004542 1.2e-140 503.4 289 86.9
Potri.017G061100 Populus trichocarpa HOM05D003555 ORTHO05D004542 2.6e-140 502.3 288 86.5
AL1G24480 Arabidopsis lyrata HOM05D003555 ORTHO05D004542 3.4e-140 501.9 288 86.5
Sabra17G0054300 Salix brachista HOM05D003555 ORTHO05D004542 3.4e-140 501.9 292 85.3
Lj1g0000762 Lotus japonicus HOM05D003555 ORTHO05D004542 4.4e-140 501.5 288 85.4
Thhalv10007948m.g Eutrema salsugineum HOM05D003555 ORTHO05D004542 7.5e-140 500.7 288 86.1
Potri.001G322500 Populus trichocarpa HOM05D003555 ORTHO05D004542 9.8e-140 500.4 288 85.8
A08p32590 Brassica napus HOM05D003555 ORTHO05D004542 1.3e-139 500.0 288 85.8
C08p15700 Brassica napus HOM05D003555 ORTHO05D004542 1.3e-139 500.0 288 85.8
BolC8t49197H Brassica oleracea HOM05D003555 ORTHO05D004542 1.3e-139 500.0 288 85.8
BraA08t35183Z Brassica rapa HOM05D003555 ORTHO05D004542 1.3e-139 500.0 288 85.8
CARHR013160 Cardamine hirsuta HOM05D003555 ORTHO05D004542 1.3e-139 500.0 288 85.8
Glyma.16G050200 Glycine max HOM05D003555 ORTHO05D004542 1.3e-139 500.0 288 85.4
TPR.G17457 Trifolium pratense HOM05D003555 ORTHO05D004542 1.7e-139 499.6 290 86.2
Dinv11219 Davidia involucrata HOM05D003555 ORTHO05D004542 2.2e-139 499.2 288 87.2
Phvul.004G070900 Phaseolus vulgaris HOM05D003555 ORTHO05D004542 2.2e-139 499.2 288 86.1
Atru.chr6.2636 Acer truncatum HOM05D003555 ORTHO05D004542 2.9e-139 498.8 288 86.5
AT1G12840 Arabidopsis thaliana HOM05D003555 ORTHO05D004542 2.9e-139 498.8 288 86.1
BcaB03g13163 Brassica carinata HOM05D003555 ORTHO05D004542 2.9e-139 498.8 288 85.4
VMungo1383G1114 Vigna mungo HOM05D003555 ORTHO05D004542 3.7e-139 498.4 288 85.8
Lalb_Chr24g0403201 Lupinus albus HOM05D003555 ORTHO05D004542 4.9e-139 498.0 288 84.7
Medtr7g083720 Medicago truncatula HOM05D003555 ORTHO05D004542 4.9e-139 498.0 290 85.9
BcaC05g25110 Brassica carinata HOM05D003555 ORTHO05D004542 6.4e-139 497.7 288 84.7
A06p08830 Brassica napus HOM05D003555 ORTHO05D004542 6.4e-139 497.7 288 84.7
BraA06t24078Z Brassica rapa HOM05D003555 ORTHO05D004542 6.4e-139 497.7 288 84.7
Psat0s1497g0040 Pisum sativum HOM05D003555 ORTHO05D004542 8.3e-139 497.3 290 85.5
Sp1g11410 Schrenkiella parvula HOM05D003555 ORTHO05D004542 8.3e-139 497.3 288 85.4
Sed0000891 Sechium edule HOM05D003555 ORTHO05D004542 1.1e-138 496.9 288 86.8
Sed0008328 Sechium edule HOM05D003555 ORTHO05D004542 2.4e-138 495.7 288 86.8
TAR374G1733 Trochodendron aralioides HOM05D003555 ORTHO05D004542 2.4e-138 495.7 288 85.8
Duzib147G0304 Durio zibethinus HOM05D003555 ORTHO05D004542 4.1e-138 495.0 288 84.0
Actinidia18318 Actinidia chinensis HOM05D003555 ORTHO05D004542 5.4e-138 494.6 288 84.7
Eucgr.G01943 Eucalyptus grandis HOM05D003555 ORTHO05D004542 5.4e-138 494.6 291 85.6
C05p10440 Brassica napus HOM05D003555 ORTHO05D004542 7.0e-138 494.2 290 84.5
BolC5t29790H Brassica oleracea HOM05D003555 ORTHO05D004542 7.0e-138 494.2 290 84.5
GSVIVG01033006001 Vitis vinifera HOM05D003555 ORTHO05D004542 7.0e-138 494.2 288 84.7
Dinv23202 Davidia involucrata HOM05D003555 ORTHO05D004542 9.2e-138 493.8 288 85.4
Lj5A90G23 Lonicera japonica HOM05D003555 ORTHO05D004542 9.2e-138 493.8 288 85.4
BcaC05g25150 Brassica carinata HOM05D003555 ORTHO05D004542 1.6e-137 493.0 290 84.5
BcaC07g40270 Brassica carinata HOM05D003555 ORTHO05D004542 1.6e-137 493.0 288 84.0
A09p63580 Brassica napus HOM05D003555 ORTHO05D004542 1.6e-137 493.0 288 84.0
BolC8t50972H Brassica oleracea HOM05D003555 ORTHO05D004542 1.6e-137 493.0 288 84.0
BraA09t41708Z Brassica rapa HOM05D003555 ORTHO05D004542 1.6e-137 493.0 288 84.0
Ca_08125_v3 Cicer arietinum L. HOM05D003555 ORTHO05D004542 2.0e-137 492.7 290 84.8
HanXRQChr16g0528421 Helianthus annuus HOM05D003555 ORTHO05D004542 2.0e-137 492.7 288 84.4
Actinidia25536 Actinidia chinensis HOM05D003555 ORTHO05D004542 3.5e-137 491.9 288 84.0
BcaC07g41676 Brassica carinata HOM05D003555 ORTHO05D004542 3.5e-137 491.9 288 83.7
C08p47080 Brassica napus HOM05D003555 ORTHO05D004542 3.5e-137 491.9 288 83.7
BolC8t52247H Brassica oleracea HOM05D003555 ORTHO05D004542 4.6e-137 491.5 288 83.7
Phvul.001G086700 Phaseolus vulgaris HOM05D003555 ORTHO05D004542 6.0e-137 491.1 288 84.7
GSVIVG01008626001 Vitis vinifera HOM05D003555 ORTHO05D004542 6.0e-137 491.1 288 84.7
CSS0044185 Camellia sinensis var. sinensis HOM05D003555 ORTHO05D004542 1.0e-136 490.3 288 85.1
CSS0013918 Camellia sinensis var. sinensis HOM05D003555 ORTHO05D004542 1.3e-136 490.0 288 84.7
Cc05_g01690 Coffea canephora HOM05D003555 ORTHO05D004542 1.3e-136 490.0 290 84.5
MBI11_g08158_MAGBIO Magnolia biondii HOM05D003555 ORTHO05D004542 1.3e-136 490.0 288 84.7
PSO478G0165 Papaver somniferum HOM05D003555 ORTHO05D004542 1.3e-136 490.0 288 84.4
C08p33730 Brassica napus HOM05D003555 ORTHO05D004542 1.7e-136 489.6 288 83.7
BcaB08g34247 Brassica carinata HOM05D003555 ORTHO05D004542 3.0e-136 488.8 288 83.0
Hma1.2p1_1187F.1_g265130 Hydrangea macrophylla HOM05D003555 ORTHO05D004542 3.0e-136 488.8 288 83.7
Hma1.2p1_1187F.1_g265140 Hydrangea macrophylla HOM05D003555 ORTHO05D004542 3.0e-136 488.8 288 83.7
Haze_14935 Corylus avellana HOM05D003555 ORTHO05D004542 5.0e-136 488.0 347 74.9
ATR0582G027 Amborella trichopoda HOM05D003555 ORTHO05D004542 1.5e-135 486.5 288 81.9
Aa31LG1G1920 Aethionema arabicum HOM05D003555 ORTHO05D004542 1.9e-135 486.1 288 82.6
DCAR_016355 Daucus carota HOM05D003555 ORTHO05D004542 1.9e-135 486.1 289 83.0
TAR622G0101 Trochodendron aralioides HOM05D003555 ORTHO05D004542 1.9e-135 486.1 288 84.7
Sopen03g028540 Solanum pennellii HOM05D003555 ORTHO05D004542 2.5e-135 485.7 290 83.4
vmacro19161 Vaccinium macrocarpon HOM05D003555 ORTHO05D004542 2.5e-135 485.7 288 83.3
Carub.0001s1258 Capsella rubella HOM05D003555 ORTHO05D004542 3.3e-135 485.3 288 83.3
Solyc03g097800.4 Solanum lycopersicum HOM05D003555 ORTHO05D004542 3.3e-135 485.3 290 83.4
Lsat_1_v5_gn_6_50360 Lactuca sativa HOM05D003555 ORTHO05D004542 7.3e-135 484.2 294 81.3
Actinidia36835 Actinidia chinensis HOM05D003555 ORTHO05D004542 2.1e-134 482.6 288 84.0
Lsat_1_v5_gn_4_84140 Lactuca sativa HOM05D003555 ORTHO05D004542 2.8e-134 482.3 288 82.6
CAN.G637.54 Capsicum annuum HOM05D003555 ORTHO05D004542 3.6e-134 481.9 290 82.4
CAN.G257.127 Capsicum annuum HOM05D003555 ORTHO05D004542 4.7e-134 481.5 291 82.5
DCAR_021412 Daucus carota HOM05D003555 ORTHO05D004542 6.2e-134 481.1 290 82.1
Peaxi162Scf00171g01130 Petunia axillaris HOM05D003555 ORTHO05D004542 1.1e-133 480.3 290 83.4
EL10Ac3g05664 Beta vulgaris HOM05D003555 ORTHO05D004542 3.1e-133 478.8 288 79.5
Ah.07g207280 Amaranthus hybridus HOM05D003555 ORTHO05D004542 5.2e-133 478.0 288 79.9
Oeu058121.1 Olea europaea HOM05D003555 ORTHO05D004542 1.2e-132 476.9 291 82.8
Hund11754 Selenicereus undatus HOM05D003555 ORTHO05D004542 1.2e-132 476.9 288 80.6
MSTRG.22881 Avicennia marina HOM05D003555 ORTHO05D004542 1.5e-132 476.5 290 82.8
Sabra16G0204700 Salix brachista HOM05D003555 ORTHO05D004542 1.5e-132 476.5 319 75.5
Nn4g22182 Nelumbo nucifera HOM05D003555 ORTHO05D004542 2.0e-132 476.1 286 83.9
ECA232G4336 Erigeron canadensis HOM05D003555 ORTHO05D004542 2.6e-132 475.7 290 82.1
unitig_61.g26203 Utricularia gibba HOM05D003555 ORTHO05D004542 3.4e-132 475.3 290 82.4
Ah.13g068520 Amaranthus hybridus HOM05D003555 ORTHO05D004542 7.5e-132 474.2 288 79.9
SalBow1G4818 Salvia bowleyana HOM05D003555 ORTHO05D004542 9.8e-132 473.8 290 81.0
Hund04735 Selenicereus undatus HOM05D003555 ORTHO05D004542 9.8e-132 473.8 296 78.4
HPP92_022913 Vanilla planifolia HOM05D003555 ORTHO05D004542 1.7e-131 473.0 288 79.5
Zm00001eb297260 Zea mays HOM05D003555 ORTHO05D004542 1.7e-131 473.0 291 80.1
AUR62015995 Chenopodium quinoa HOM05D003555 ORTHO05D004542 2.9e-131 472.2 288 79.5
CDE05G2896 Ceratophyllum demersum HOM05D003555 ORTHO05D004542 8.3e-131 470.7 287 79.8
Migut.D01225 Erythranthe guttata HOM05D003555 ORTHO05D004542 1.4e-130 469.9 290 81.0
Sc13g0008590 Simmondsia chinensis HOM05D003555 ORTHO05D004542 1.9e-130 469.5 288 79.9
MSTRG.11256 Avicennia marina HOM05D003555 ORTHO05D004542 2.4e-130 469.2 290 81.0
Os05g0593100 Oryza sativa ssp. japonica HOM05D003555 ORTHO05D004542 4.1e-130 468.4 291 79.4
Nn5g27103 Nelumbo nucifera HOM05D003555 ORTHO05D004542 1.2e-129 466.8 284 81.0
Zm00001eb345260 Zea mays HOM05D003555 ORTHO05D004542 1.2e-129 466.8 291 78.7
MBI07_g40357_MAGBIO Magnolia biondii HOM05D003555 ORTHO05D004542 2.3e-125 452.6 286 80.4
Rhsim08G0195300 Rhododendron simsii HOM05D003555 ORTHO05D004542 4.0e-125 451.8 367 65.7
COL.COLO4_13344 Corchorus olitorius HOM05D003555 ORTHO05D004542 9.9e-124 447.2 288 80.2
Zm00001eb163710 Zea mays HOM05D003555 ORTHO05D004542 2.2e-123 446.0 291 76.3
Manes.11G078200 Manihot esculenta HOM05D003555 ORTHO05D004542 1.7e-120 436.4 252 87.3
Gorai.007G072500 Gossypium raimondii HOM05D003555 ORTHO05D004542 1.1e-119 433.7 251 85.3
SGA_v2.0_scaffold14G07035 Striga asiatica HOM05D003555 ORTHO05D004542 3.6e-118 428.7 290 75.5
SEGI_35214 Sequoiadendron giganteum HOM05D003555 ORTHO05D004542 8.9e-117 424.1 287 72.5
Lsat_1_v5_gn_4_84120 Lactuca sativa HOM05D003555 ORTHO05D004542 2.2e-115 419.5 250 82.8
Nn3g16313 Nelumbo nucifera HOM05D003555 ORTHO05D004542 3.2e-114 415.6 284 73.9
Sc25g0000460 Simmondsia chinensis HOM05D003555 ORTHO05D004542 9.3e-114 414.1 251 81.7
Mapoly0126s0013 Marchantia polymorpha HOM05D003555 ORTHO05D004542 2.3e-112 409.5 288 67.4
CDE05G1333 Ceratophyllum demersum HOM05D003555 ORTHO05D004542 3.3e-111 405.6 287 71.1
SMO200G0006 Selaginella moellendorffii HOM05D003555 ORTHO05D004542 4.9e-107 391.7 286 65.4
Pp3c13_14220 Physcomitrium patens HOM05D003555 ORTHO05D004542 2.7e-105 386.0 287 64.5
ECA246G0182 Erigeron canadensis HOM05D003555 ORTHO05D004542 7.4e-103 377.9 229 81.2
AUR62021202 Chenopodium quinoa HOM05D003555 ORTHO05D004542 2.4e-101 372.9 248 75.0
Eucgr.G01949 Eucalyptus grandis HOM05D003555 ORTHO05D004542 1.3e-99 367.1 211 88.2
AagrBONN_evm.TU.Sc2ySwM_228.2553 Anthoceros agrestis HOM05D003555 ORTHO05D004542 7.1e-98 361.3 292 58.6
Lj9A484G61 Lonicera japonica HOM05D003555 ORTHO05D004542 2.1e-97 359.8 235 76.6
Nitab4.5_0007858g0030 Nicotiana tabacum HOM05D003555 ORTHO05D004542 8.7e-96 354.4 210 84.8
Nitab4.5_0005207g0040 Nicotiana tabacum HOM05D003555 ORTHO05D004542 5.6e-95 351.7 209 84.2
QL02p069938 Quercus lobata HOM05D003555 ORTHO05D004542 1.1e-90 337.4 288 64.6
Oeu058117.1 Olea europaea HOM05D003555 ORTHO05D004542 4.5e-84 315.5 302 57.9
Actinidia08900 Actinidia chinensis HOM05D003555 ORTHO05D004542 4.1e-77 292.4 247 64.4
CSS0036109 Camellia sinensis var. sinensis HOM05D003555 ORTHO05D004542 5.0e-75 285.4 201 75.6
Pp3c9_8980 Physcomitrium patens HOM05D003555 ORTHO05D004542 2.7e-73 279.6 287 49.8
Cre06.g250250 Chlamydomonas reinhardtii HOM05D003555 ORTHO05D004542 6.3e-70 268.5 285 46.7
HanXRQChr09g0273581 Helianthus annuus HOM05D003555 ORTHO05D004542 1.1e-69 267.7 213 64.8
MCO15G152 Micromonas commoda HOM05D003555 ORTHO05D004542 1.8e-69 266.9 301 46.8
PRCOL_00003348 Prasinoderma coloniale HOM05D003555 ORTHO05D004542 9.4e-66 254.6 288 46.5
CBR_g724 Chara braunii HOM05D003555 ORTHO05D004542 2.8e-62 243.0 186 59.7
Lsat_1_v5_gn_5_10760 Lactuca sativa HOM05D003555 ORTHO05D004542 6.5e-59 231.9 144 77.8
Haze_27306 Corylus avellana HOM05D003555 ORTHO05D163602 7.5e-55 218.4 291 40.5
Hma1.2p1_0403F.1_g145240 Hydrangea macrophylla HOM05D003555 ORTHO05D004542 5.2e-40 169.1 136 63.2
BcaB01g02330 Brassica carinata HOM05D003555 ORTHO05D002990 1.8e-37 160.6 185 55.1
Cfa026601 Carpinus fangiana HOM05D003555 ORTHO05D123537 7.3e-34 148.7 292 31.8
FAN09G3010 Fragaria x ananassa HOM05D003555 ORTHO05D004542 2.1e-33 147.1 81 90.1
RcHm_v2.0_Chr5g0048981 Rosa chinensis HOM05D003555 ORTHO05D004542 4.7e-33 146.0 126 62.7
BcaC02g12651 Brassica carinata HOM05D003555 ORTHO05D095367 1.7e-27 127.5 180 47.2
Lsat_1_v5_gn_4_68061 Lactuca sativa HOM05D004816 ORTHO05D006043 4.3e-26 122.9 126 54.8
VMungo0331G0161 Vigna mungo HOM05D003555 ORTHO05D004542 6.2e-25 119.0 70 81.4
VMungo0464G1180 Vigna mungo HOM05D003555 ORTHO05D004542 2.7e-20 103.6 69 73.9
THA.LOC104805959 Tarenaya hassleriana HOM05D003555 ORTHO05D022543 2.6e-15 87.0 44 95.5
C02p56920 Brassica napus HOM05D003555 ORTHO05D040056 1.7e-14 84.3 70 61.4
BcaC03g17683 Brassica carinata HOM05D003555 ORTHO05D040056 1.4e-13 81.3 71 56.3
VMungo0251G2278 Vigna mungo HOM05D003555 ORTHO05D001686 1.2e-12 78.2 118 41.5
Duzib114G0355 Durio zibethinus HOM05D003555 ORTHO05D186121 4.7e-09 66.2 41 78.0


User provided reference genes

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