Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc7.75 Carica papaya HOM05D000146 ORTHO05D120976 4.5e-29 130.6 65 100.0
Cpa.g.sc84.83 Carica papaya HOM05D000146 ORTHO05D002110 3.8e-20 100.9 62 82.3
Cpa.g.sc56.100 Carica papaya HOM05D000146 ORTHO05D118896 4.1e-14 80.9 56 73.2
Manes.14G000800 Manihot esculenta HOM05D000146 ORTHO05D002110 9.0e-14 79.7 62 58.1
MD11G1028700 Malus domestica HOM05D000146 ORTHO05D002110 2.6e-13 78.2 62 61.3
Dinv36286 Davidia involucrata HOM05D000146 ORTHO05D002110 3.4e-13 77.8 62 59.7
TWI34G0291 Tripterygium wilfordii HOM05D000146 ORTHO05D002110 4.5e-13 77.4 59 64.4
CANSAT54G2257 Cannabis sativa HOM05D000146 ORTHO05D002110 7.6e-13 76.6 62 59.7
Dinv08038 Davidia involucrata HOM05D000146 ORTHO05D002110 1.7e-12 75.5 62 58.1
THA.LOC104811144 Tarenaya hassleriana HOM05D000146 ORTHO05D002110 1.7e-12 75.5 62 59.7
TWI60G1279 Tripterygium wilfordii HOM05D000146 ORTHO05D002110 2.2e-12 75.1 59 62.7
Atru.chr3.2581 Acer truncatum HOM05D000146 ORTHO05D002110 2.9e-12 74.7 61 60.7
CiPaw.13G163700 Carya illinoinensis HOM05D000146 ORTHO05D002110 3.8e-12 74.3 59 62.7
Potri.003G205800 Populus trichocarpa HOM05D000146 ORTHO05D002110 3.8e-12 74.3 59 59.3
Ciclev10015414m.g Citrus clementina HOM05D000146 ORTHO05D002110 5.0e-12 73.9 62 58.1
Actinidia06884 Actinidia chinensis HOM05D000146 ORTHO05D002110 6.5e-12 73.6 62 56.5
MD03G1023600 Malus domestica HOM05D000146 ORTHO05D002110 8.4e-12 73.2 62 59.7
CSS0028546 Camellia sinensis var. sinensis HOM05D000146 ORTHO05D002110 1.1e-11 72.8 62 59.7
Hma1.2p1_0027F.1_g017040 Hydrangea macrophylla HOM05D000146 ORTHO05D002110 1.1e-11 72.8 62 58.1
GSVIVG01025309001 Vitis vinifera HOM05D000146 ORTHO05D002110 1.1e-11 72.8 59 61.0
FvH4_3g43220 Fragaria vesca HOM05D000146 ORTHO05D002110 1.4e-11 72.4 62 53.2
FAN11G1446 Fragaria x ananassa HOM05D000146 ORTHO05D002110 1.4e-11 72.4 62 53.2
FAN21G0694 Fragaria x ananassa HOM05D000146 ORTHO05D002110 1.4e-11 72.4 62 53.2
Manes.06G167100 Manihot esculenta HOM05D000146 ORTHO05D002110 1.4e-11 72.4 62 54.8
VMungo1127G1602 Vigna mungo HOM05D000146 ORTHO05D002110 1.4e-11 72.4 62 59.7
FAN16G0681 Fragaria x ananassa HOM05D000146 ORTHO05D002110 1.9e-11 72.0 62 53.2
FAN25G3152 Fragaria x ananassa HOM05D000146 ORTHO05D002110 1.9e-11 72.0 62 53.2
Prupe.6G022800 Prunus persica HOM05D000146 ORTHO05D002110 1.9e-11 72.0 59 61.0
Cfa009730 Carpinus fangiana HOM05D000146 ORTHO05D002110 3.2e-11 71.2 62 54.8
Sc16g0011620 Simmondsia chinensis HOM05D000146 ORTHO05D002110 3.2e-11 71.2 62 59.7
QL01p005353 Quercus lobata HOM05D000146 ORTHO05D002110 4.2e-11 70.9 59 57.6
Sabra03G0152000 Salix brachista HOM05D000146 ORTHO05D002110 4.2e-11 70.9 57 59.6
Haze_23084 Corylus avellana HOM05D000146 ORTHO05D002110 7.2e-11 70.1 62 53.2
MELO3C014610.2 Cucumis melo HOM05D000146 ORTHO05D002110 7.2e-11 70.1 62 54.8
Phvul.011G057900 Phaseolus vulgaris HOM05D000146 ORTHO05D002110 7.2e-11 70.1 62 59.7
Aqoxy1G00254 Aquilegia oxysepala HOM05D000146 ORTHO05D002110 9.3e-11 69.7 59 61.0
Thecc.09G227000 Theobroma cacao HOM05D000146 ORTHO05D002110 9.3e-11 69.7 62 59.7
CsaV3_4G024110 Cucumis sativus L. HOM05D000146 ORTHO05D002110 1.2e-10 69.3 57 59.6
ClCG02G023400 Citrullus lanatus HOM05D000146 ORTHO05D002110 1.6e-10 68.9 57 63.2
COL.COLO4_24843 Corchorus olitorius HOM05D000146 ORTHO05D002110 2.1e-10 68.6 62 59.7
HanXRQChr13g0403961 Helianthus annuus HOM05D000146 ORTHO05D002110 2.1e-10 68.6 60 56.7
Lsat_1_v5_gn_6_48420 Lactuca sativa HOM05D000146 ORTHO05D002110 2.1e-10 68.6 61 52.5
Potri.001G018300 Populus trichocarpa HOM05D000146 ORTHO05D002110 2.1e-10 68.6 62 53.2
RcHm_v2.0_Chr5g0077231 Rosa chinensis HOM05D000146 ORTHO05D002110 2.7e-10 68.2 59 54.2
Duzib170G0438 Durio zibethinus HOM05D000146 ORTHO05D002110 3.5e-10 67.8 62 58.1
TAR369G0369 Trochodendron aralioides HOM05D000146 ORTHO05D002110 4.6e-10 67.4 62 51.6
Duzib150G0672 Durio zibethinus HOM05D000146 ORTHO05D002110 6.1e-10 67.0 62 58.1
DCAR_002053 Daucus carota HOM05D000146 ORTHO05D002110 7.9e-10 66.6 61 52.5
Duzib168G1722 Durio zibethinus HOM05D000146 ORTHO05D002110 7.9e-10 66.6 62 58.1
arahy.Tifrunner.gnm1.ann1.4F27GG Arachis hypogaea HOM05D000146 ORTHO05D002110 1.0e-09 66.2 59 61.0
Nn7g36186 Nelumbo nucifera HOM05D000146 ORTHO05D002110 1.0e-09 66.2 62 48.4
TAR633G1287 Trochodendron aralioides HOM05D000146 ORTHO05D002110 1.0e-09 66.2 54 59.3
Ah.06g193600 Amaranthus hybridus HOM05D000146 ORTHO05D002110 1.8e-09 65.5 60 58.3
Gohir.A05G068200 Gossypium hirsutum HOM05D000146 ORTHO05D002110 1.8e-09 65.5 62 54.8
Gohir.D05G071200 Gossypium hirsutum HOM05D000146 ORTHO05D002110 1.8e-09 65.5 62 54.8
Nitab4.5_0002766g0010 Nicotiana tabacum HOM05D000146 ORTHO05D002110 1.8e-09 65.5 59 55.9
PSO339G6030 Papaver somniferum HOM05D000146 ORTHO05D002110 1.8e-09 65.5 62 51.6
PSO384G2808 Papaver somniferum HOM05D000146 ORTHO05D002110 1.8e-09 65.5 62 51.6
Psat5g221800 Pisum sativum HOM05D000146 ORTHO05D002110 2.3e-09 65.1 62 53.2
Sabra01G0012900 Salix brachista HOM05D000146 ORTHO05D002110 2.3e-09 65.1 62 51.6
TAR623G0874 Trochodendron aralioides HOM05D000146 ORTHO05D002110 2.3e-09 65.1 62 50.0
AUR62000093 Chenopodium quinoa HOM05D000146 ORTHO05D002110 3.0e-09 64.7 60 56.7
AUR62019265 Chenopodium quinoa HOM05D000146 ORTHO05D002110 3.0e-09 64.7 60 56.7
Cc01_g04740 Coffea canephora HOM05D000146 ORTHO05D002110 3.0e-09 64.7 61 50.8
Gorai.001G140200 Gossypium raimondii HOM05D000146 ORTHO05D002110 3.0e-09 64.7 62 56.5
Oeu035744.1 Olea europaea HOM05D000146 ORTHO05D002110 3.0e-09 64.7 62 54.8
PGR102G0563 Punica granatum HOM05D000146 ORTHO05D002110 3.0e-09 64.7 59 52.5
Glyma.11G131800 Glycine max HOM05D000146 ORTHO05D002110 3.9e-09 64.3 62 54.8
Gorai.009G072200 Gossypium raimondii HOM05D000146 ORTHO05D002110 3.9e-09 64.3 62 54.8
arahy.Tifrunner.gnm1.ann1.TS2TKV Arachis hypogaea HOM05D000146 ORTHO05D002110 6.7e-09 63.5 59 59.3
Medtr4g065080 Medicago truncatula HOM05D000146 ORTHO05D002110 6.7e-09 63.5 64 54.7
CSS0048649 Camellia sinensis var. sinensis HOM05D000146 ORTHO05D002110 8.7e-09 63.2 62 53.2
Gohir.D07G129600 Gossypium hirsutum HOM05D000146 ORTHO05D002110 8.7e-09 63.2 62 54.8
Rhsim13G0224300 Rhododendron simsii HOM05D000146 ORTHO05D002110 8.7e-09 63.2 63 54.0
Peaxi162Scf00839g00001 Petunia axillaris HOM05D000146 ORTHO05D002110 1.5e-08 62.4 59 55.9
CAN.G31.14 Capsicum annuum HOM05D000146 ORTHO05D002110 1.9e-08 62.0 60 56.7
Ca_20575_v3 Cicer arietinum L. HOM05D000146 ORTHO05D002110 1.9e-08 62.0 62 50.0
ECA233G1081 Erigeron canadensis HOM05D000146 ORTHO05D002110 1.9e-08 62.0 60 50.0
HanXRQChr07g0197311 Helianthus annuus HOM05D000146 ORTHO05D002110 1.9e-08 62.0 58 56.9
Nitab4.5_0002278g0010 Nicotiana tabacum HOM05D000146 ORTHO05D002110 1.9e-08 62.0 59 54.2
CSS0010504 Camellia sinensis var. sinensis HOM05D000146 ORTHO05D002110 2.5e-08 61.6 62 51.6
Gohir.A07G125400 Gossypium hirsutum HOM05D000146 ORTHO05D002110 3.3e-08 61.2 56 60.7
Ah.04g161830 Amaranthus hybridus HOM05D000146 ORTHO05D002110 5.7e-08 60.5 60 51.7
Glyma.12G056000 Glycine max HOM05D000146 ORTHO05D002110 9.7e-08 59.7 62 51.6
CARHR041220 Cardamine hirsuta HOM05D000146 ORTHO05D002110 2.2e-07 58.5 64 50.0
Migut.D00573 Erythranthe guttata HOM05D000146 ORTHO05D002110 2.8e-07 58.2 62 51.6
THA.LOC104818125 Tarenaya hassleriana HOM05D000146 ORTHO05D002110 3.7e-07 57.8 62 54.8
Lalb_Chr01g0003321 Lupinus albus HOM05D000146 ORTHO05D002110 4.8e-07 57.4 59 54.2
Oeu052058.1 Olea europaea HOM05D000146 ORTHO05D002110 8.2e-07 56.6 44 56.8
Sc09g0000560 Simmondsia chinensis HOM05D000146 ORTHO05D002110 8.2e-07 56.6 59 54.2
Lj3g0010576 Lotus japonicus HOM05D000146 ORTHO05D002110 1.1e-06 56.2 63 49.2
Sed0015575 Sechium edule HOM05D000146 ORTHO05D002110 1.1e-06 56.2 56 55.4
ECA238G4207 Erigeron canadensis HOM05D000146 ORTHO05D002110 1.4e-06 55.8 58 53.4
BcaB07g33564 Brassica carinata HOM05D000146 ORTHO05D002110 1.8e-06 55.5 48 56.2
Aa31LG10G3460 Aethionema arabicum HOM05D000146 ORTHO05D002110 2.4e-06 55.1 59 52.5
AT3G20830 Arabidopsis thaliana HOM05D000146 ORTHO05D002110 2.4e-06 55.1 62 50.0
AL3G34770 Arabidopsis lyrata HOM05D000146 ORTHO05D002110 3.1e-06 54.7 62 50.0
BcaC08g43290 Brassica carinata HOM05D000146 ORTHO05D002110 3.1e-06 54.7 48 56.2
C06p06400 Brassica napus HOM05D000146 ORTHO05D002110 3.1e-06 54.7 48 56.2
BolC6t35750H Brassica oleracea HOM05D000146 ORTHO05D002110 3.1e-06 54.7 48 56.2
BraA06t23469Z Brassica rapa HOM05D000146 ORTHO05D002110 3.1e-06 54.7 48 56.2
A06p02620 Brassica napus HOM05D000146 ORTHO05D002110 5.3e-06 53.9 45 60.0
Thhalv10011554m.g Eutrema salsugineum HOM05D000146 ORTHO05D002110 5.3e-06 53.9 59 50.8
Gohir.A08G013000 Gossypium hirsutum HOM05D000146 ORTHO05D002110 5.3e-06 53.9 59 52.5
Gohir.D08G023400 Gossypium hirsutum HOM05D000146 ORTHO05D002110 5.3e-06 53.9 59 50.8
Gorai.004G018700 Gossypium raimondii HOM05D000146 ORTHO05D002110 6.9e-06 53.5 59 50.8
Lalb_Chr22g0352301 Lupinus albus HOM05D000146 ORTHO05D002110 6.9e-06 53.5 59 52.5


User provided reference genes

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