Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc7.59 Carica papaya HOM05D005954 ORTHO05D007347 5.2e-79 297.7 161 100.0
Dinv04624 Davidia involucrata HOM05D005954 ORTHO05D007347 1.5e-46 189.9 162 73.5
Ciclev10017015m.g Citrus clementina HOM05D005954 ORTHO05D007347 4.5e-46 188.3 167 72.5
Gohir.D05G158700 Gossypium hirsutum HOM05D005954 ORTHO05D007347 1.1e-44 183.7 150 72.7
Gorai.009G163700 Gossypium raimondii HOM05D005954 ORTHO05D007347 1.9e-44 183.0 150 72.7
Gohir.A05G156000 Gossypium hirsutum HOM05D005954 ORTHO05D007347 2.4e-44 182.6 161 70.2
Gohir.A06G134004 Gossypium hirsutum HOM05D005954 ORTHO05D007347 7.1e-44 181.0 160 70.0
Manes.17G054200 Manihot esculenta HOM05D005954 ORTHO05D007347 7.1e-44 181.0 161 69.6
MELO3C007218.2 Cucumis melo HOM05D005954 ORTHO05D007347 9.3e-44 180.6 156 70.5
CsaV3_6G050830 Cucumis sativus L. HOM05D005954 ORTHO05D007347 9.3e-44 180.6 156 70.5
PGR004G0539 Punica granatum HOM05D005954 ORTHO05D007347 1.6e-43 179.9 164 68.3
PGR004G0737 Punica granatum HOM05D005954 ORTHO05D007347 1.6e-43 179.9 164 68.3
Thecc.06G173000 Theobroma cacao HOM05D005954 ORTHO05D007347 2.7e-43 179.1 163 68.7
Potri.011G064800 Populus trichocarpa HOM05D005954 ORTHO05D007347 4.6e-43 178.3 160 68.8
Manes.16G037400 Manihot esculenta HOM05D005954 ORTHO05D007347 1.0e-42 177.2 160 70.0
Atru.chr10.1690 Acer truncatum HOM05D005954 ORTHO05D007347 1.3e-42 176.8 160 69.4
TAR626G1287 Trochodendron aralioides HOM05D005954 ORTHO05D007347 1.8e-42 176.4 163 68.1
TWI38G2142 Tripterygium wilfordii HOM05D005954 ORTHO05D007347 2.3e-42 176.0 158 65.8
Gohir.D06G136500 Gossypium hirsutum HOM05D005954 ORTHO05D007347 3.0e-42 175.6 161 69.6
Gorai.010G158700 Gossypium raimondii HOM05D005954 ORTHO05D007347 3.0e-42 175.6 161 69.6
Haze_06257 Corylus avellana HOM05D005954 ORTHO05D007347 3.9e-42 175.3 163 68.1
ClCG01G023670 Citrullus lanatus HOM05D005954 ORTHO05D007347 6.7e-42 174.5 156 69.9
Nitab4.5_0004274g0040 Nicotiana tabacum HOM05D005954 ORTHO05D007347 7.4e-41 171.0 166 65.7
Nn1g09054 Nelumbo nucifera HOM05D005954 ORTHO05D007347 9.6e-41 170.6 163 68.7
Prupe.4G059500 Prunus persica HOM05D005954 ORTHO05D007347 1.3e-40 170.2 164 67.7
Nitab4.5_0000117g0150 Nicotiana tabacum HOM05D005954 ORTHO05D007347 2.1e-40 169.5 166 65.1
FAN21G0082 Fragaria x ananassa HOM05D005954 ORTHO05D007347 2.8e-40 169.1 156 69.2
CSS0014251 Camellia sinensis var. sinensis HOM05D005954 ORTHO05D007347 4.8e-40 168.3 164 65.2
Duzib160G0806 Durio zibethinus HOM05D005954 ORTHO05D007347 4.8e-40 168.3 161 67.1
THA.LOC104820590 Tarenaya hassleriana HOM05D005954 ORTHO05D007347 4.8e-40 168.3 167 65.3
FvH4_3g07980 Fragaria vesca HOM05D005954 ORTHO05D007347 6.2e-40 167.9 156 68.6
FAN16G0914 Fragaria x ananassa HOM05D005954 ORTHO05D007347 6.2e-40 167.9 156 68.6
Peaxi162Scf00061g00155 Petunia axillaris HOM05D005954 ORTHO05D007347 5.3e-39 164.9 145 67.6
RcHm_v2.0_Chr5g0010351 Rosa chinensis HOM05D005954 ORTHO05D007347 5.3e-39 164.9 151 70.9
CANSAT11G0094 Cannabis sativa HOM05D005954 ORTHO05D007347 9.0e-39 164.1 167 64.1
FAN11G0799 Fragaria x ananassa HOM05D005954 ORTHO05D007347 9.0e-39 164.1 156 67.9
MSTRG.14726 Avicennia marina HOM05D005954 ORTHO05D007347 2.0e-38 162.9 137 68.6
QL05p046336 Quercus lobata HOM05D005954 ORTHO05D007347 4.5e-38 161.8 164 65.2
GSVIVG01021193001 Vitis vinifera HOM05D005954 ORTHO05D007347 7.6e-38 161.0 112 82.1
Eucgr.D00519 Eucalyptus grandis HOM05D005954 ORTHO05D007347 1.7e-37 159.8 162 64.2
PSO541G3988 Papaver somniferum HOM05D005954 ORTHO05D007347 2.2e-37 159.5 160 62.5
Sed0006910 Sechium edule HOM05D005954 ORTHO05D007347 2.2e-37 159.5 157 67.5
Migut.H01450 Erythranthe guttata HOM05D005954 ORTHO05D007347 8.4e-37 157.5 144 63.9
Sabra11G0046600 Salix brachista HOM05D005954 ORTHO05D007347 8.4e-37 157.5 201 54.7
Cc02_g14660 Coffea canephora HOM05D005954 ORTHO05D007347 2.5e-36 156.0 143 67.1
CARHR028290 Cardamine hirsuta HOM05D005954 ORTHO05D007347 3.2e-36 155.6 161 61.5
PSO675G5672 Papaver somniferum HOM05D005954 ORTHO05D007347 3.2e-36 155.6 160 61.2
Aa31LG5G21180 Aethionema arabicum HOM05D005954 ORTHO05D007347 4.2e-36 155.2 163 62.0
C07p16610 Brassica napus HOM05D005954 ORTHO05D007347 4.2e-36 155.2 157 63.1
Solyc01g056780.3 Solanum lycopersicum HOM05D005954 ORTHO05D007347 5.5e-36 154.8 158 60.8
AL1G42790 Arabidopsis lyrata HOM05D005954 ORTHO05D007347 7.1e-36 154.5 163 63.2
PGSC0003DMG400021493 Solanum tuberosum HOM05D005954 ORTHO05D007347 7.1e-36 154.5 158 62.7
Thhalv10008967m.g Eutrema salsugineum HOM05D005954 ORTHO05D007347 9.3e-36 154.1 161 63.4
BcaB07g32486 Brassica carinata HOM05D005954 ORTHO05D007347 1.2e-35 153.7 163 62.0
MD10G1282300 Malus domestica HOM05D005954 ORTHO05D007347 1.2e-35 153.7 163 64.4
A08p25330 Brassica napus HOM05D005954 ORTHO05D007347 1.6e-35 153.3 140 67.9
BraA08t34485Z Brassica rapa HOM05D005954 ORTHO05D007347 1.6e-35 153.3 140 67.9
AT1G29070 Arabidopsis thaliana HOM05D005954 ORTHO05D007347 2.7e-35 152.5 163 62.6
BcaC05g26922 Brassica carinata HOM05D005954 ORTHO05D007347 2.7e-35 152.5 161 61.5
C03p75510 Brassica napus HOM05D005954 ORTHO05D007347 2.7e-35 152.5 167 60.5
C05p27750 Brassica napus HOM05D005954 ORTHO05D007347 2.7e-35 152.5 161 61.5
BolC5t31496H Brassica oleracea HOM05D005954 ORTHO05D007347 2.7e-35 152.5 161 61.5
A09p37340 Brassica napus HOM05D005954 ORTHO05D007347 3.5e-35 152.1 163 62.6
BolC3t19807H Brassica oleracea HOM05D005954 ORTHO05D007347 3.5e-35 152.1 168 61.3
BraA09t39243Z Brassica rapa HOM05D005954 ORTHO05D007347 3.5e-35 152.1 163 62.6
Sp1g25010 Schrenkiella parvula HOM05D005954 ORTHO05D007347 4.6e-35 151.8 161 62.1
Ah.09g233660 Amaranthus hybridus HOM05D005954 ORTHO05D007347 6.0e-35 151.4 138 68.8
Carub.0001s2727 Capsella rubella HOM05D005954 ORTHO05D007347 1.0e-34 150.6 161 61.5
AUR62036591 Chenopodium quinoa HOM05D005954 ORTHO05D007347 1.0e-34 150.6 160 61.9
Aqoxy1G03187 Aquilegia oxysepala HOM05D005954 ORTHO05D007347 1.3e-34 150.2 133 66.9
BcaNung06755 Brassica carinata HOM05D005954 ORTHO05D007347 1.3e-34 150.2 167 59.3
CDE05G1458 Ceratophyllum demersum HOM05D005954 ORTHO05D007347 1.8e-34 149.8 136 68.4
BcaNung06433 Brassica carinata HOM05D005954 ORTHO05D007347 3.0e-34 149.1 166 59.6
CiPaw.09G068600 Carya illinoinensis HOM05D005954 ORTHO05D007347 5.1e-34 148.3 166 62.0
Phvul.006G176900 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 6.7e-34 147.9 160 57.5
Phvul.006G176980 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 6.7e-34 147.9 160 57.5
SalBow8G3893 Salvia bowleyana HOM05D005954 ORTHO05D007347 6.7e-34 147.9 147 64.6
Cfa000593 Carpinus fangiana HOM05D005954 ORTHO05D007347 9.7e-33 144.1 163 59.5
Lj6g0020578 Lotus japonicus HOM05D005954 ORTHO05D007347 1.3e-32 143.7 154 61.0
Glyma.13G230600 Glycine max HOM05D005954 ORTHO05D007347 2.2e-32 142.9 136 61.0
AUR62031174 Chenopodium quinoa HOM05D005954 ORTHO05D007347 2.8e-32 142.5 160 60.6
arahy.Tifrunner.gnm1.ann1.N07IEU Arachis hypogaea HOM05D005954 ORTHO05D007347 6.3e-32 141.4 154 59.7
DCAR_007962 Daucus carota HOM05D005954 ORTHO05D007347 6.3e-32 141.4 135 68.1
Sopen01g025250 Solanum pennellii HOM05D005954 ORTHO05D007347 8.2e-32 141.0 167 56.9
Lsat_1_v5_gn_7_23061 Lactuca sativa HOM05D005954 ORTHO05D007347 1.4e-31 140.2 151 62.9
MD05G1303200 Malus domestica HOM05D005954 ORTHO05D007347 1.4e-31 140.2 161 60.2
Glyma.15G082000 Glycine max HOM05D005954 ORTHO05D007347 9.0e-31 137.5 160 56.9
HanXRQChr04g0116001 Helianthus annuus HOM05D005954 ORTHO05D007347 9.0e-31 137.5 144 64.6
MBI13_g00561_MAGBIO Magnolia biondii HOM05D005954 ORTHO05D007347 1.2e-30 137.1 143 62.9
Rhsim13G0191500 Rhododendron simsii HOM05D005954 ORTHO05D007347 5.9e-30 134.8 129 65.9
EL10Ac8g20509 Beta vulgaris HOM05D005954 ORTHO05D007347 2.2e-29 132.9 153 58.8
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 2.2e-29 132.9 117 69.2
ECA236G0551 Erigeron canadensis HOM05D005954 ORTHO05D007347 6.5e-29 131.3 145 57.9
Hund23979 Selenicereus undatus HOM05D005954 ORTHO05D007347 6.5e-29 131.3 155 58.1
MD16G1032000 Malus domestica HOM05D005954 ORTHO05D007347 8.5e-29 131.0 160 58.1
arahy.Tifrunner.gnm1.ann1.YBYE48 Arachis hypogaea HOM05D005954 ORTHO05D007347 1.9e-28 129.8 154 59.7
SGA_v2.0_scaffold1G00032 Striga asiatica HOM05D005954 ORTHO05D007347 1.9e-28 129.8 145 61.4
TPR.G11659 Trifolium pratense HOM05D005954 ORTHO05D007347 9.3e-28 127.5 153 56.9
Medtr2g015790 Medicago truncatula HOM05D005954 ORTHO05D007347 4.6e-27 125.2 140 57.9
arahy.Tifrunner.gnm1.ann1.69550A Arachis hypogaea HOM05D005954 ORTHO05D007347 2.3e-26 122.9 143 58.0
ATR0602G014 Amborella trichopoda HOM05D005954 ORTHO05D007347 3.9e-26 122.1 101 71.3
CAN.G889.12 Capsicum annuum HOM05D005954 ORTHO05D007347 6.7e-26 121.3 147 55.8
MD10G1067400 Malus domestica HOM05D005954 ORTHO05D007347 1.1e-25 120.6 151 56.3
Oeu001090.1 Olea europaea HOM05D005954 ORTHO05D007347 1.1e-25 120.6 108 65.7
vmacro01548 Vaccinium macrocarpon HOM05D005954 ORTHO05D007347 1.5e-25 120.2 142 57.7
COL.COLO4_31320 Corchorus olitorius HOM05D005954 ORTHO05D007347 4.3e-25 118.6 68 91.2
Atru.chr10.1684 Acer truncatum HOM05D005954 ORTHO05D007347 1.3e-24 117.1 76 82.9
BcaC06g35397 Brassica carinata HOM05D005954 ORTHO05D007347 2.2e-24 116.3 157 52.9
unitig_22.g6753 Utricularia gibba HOM05D005954 ORTHO05D007347 3.7e-24 115.5 168 54.8
Psat1g199440 Pisum sativum HOM05D005954 ORTHO05D007347 4.8e-24 115.2 156 55.1
Lj1P1194T69 Lonicera japonica HOM05D005954 ORTHO05D007347 1.1e-23 114.0 86 75.6
Zm00001eb150530 Zea mays HOM05D005954 ORTHO05D007347 3.4e-22 109.0 102 61.8
Os01g0805000 Oryza sativa ssp. japonica HOM05D005954 ORTHO05D007347 7.7e-22 107.8 94 66.0
Ca_00467_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 3.8e-21 105.5 94 68.1
Ca_30955_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 3.8e-21 105.5 94 68.1
MD16G1032400 Malus domestica HOM05D005954 ORTHO05D007347 5.0e-21 105.1 107 63.6
HPP92_016045 Vanilla planifolia HOM05D005954 ORTHO05D007347 6.5e-21 104.8 88 70.5
Sc05g0007180 Simmondsia chinensis HOM05D005954 ORTHO05D007347 4.2e-20 102.1 78 74.4
Lalb_Chr20g0121221 Lupinus albus HOM05D005954 ORTHO05D007347 6.1e-19 98.2 148 48.6
CARHR028330 Cardamine hirsuta HOM05D005954 ORTHO05D007347 5.7e-17 91.7 59 81.4
AagrBONN_evm.TU.Sc2ySwM_117.1983 Anthoceros agrestis HOM05D005954 ORTHO05D007347 1.3e-16 90.5 122 52.5
MD16G1032600 Malus domestica HOM05D005954 ORTHO05D007347 6.3e-16 88.2 123 52.8
Pp3c18_19220 Physcomitrium patens HOM05D005954 ORTHO05D007347 7.7e-14 81.3 107 54.2
Pp3c21_6450 Physcomitrium patens HOM05D005954 ORTHO05D007347 2.9e-13 79.3 125 48.8
CBR_g29683 Chara braunii HOM05D005954 ORTHO05D007347 7.2e-12 74.7 106 50.0
SEGI_22528 Sequoiadendron giganteum HOM05D005954 ORTHO05D007347 3.6e-11 72.4 82 59.8
Mapoly0043s0046 Marchantia polymorpha HOM05D005954 ORTHO05D007347 8.0e-11 71.2 122 46.7
Nn3g19836 Nelumbo nucifera HOM05D005954 ORTHO05D007347 1.3e-08 63.9 46 76.1
Nn1g04376 Nelumbo nucifera HOM05D005954 ORTHO05D007347 1.4e-07 60.5 77 50.6
PRCOL_00001665 Prasinoderma coloniale HOM05D005954 ORTHO05D007347 9.1e-07 57.8 90 50.0


User provided reference genes

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