Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc7.37 Carica papaya HOM05D007489 ORTHO05D008037 9.9e-267 922.9 482 100.0
CiPaw.10G057000 Carya illinoinensis HOM05D007489 ORTHO05D008037 1.6e-38 164.9 424 33.5
Atru.chr10.1727 Acer truncatum HOM05D007489 ORTHO05D008037 2.7e-38 164.1 437 32.0
Gohir.A10G030500 Gossypium hirsutum HOM05D007489 ORTHO05D008037 1.4e-34 151.8 454 33.0
Gohir.D10G031400 Gossypium hirsutum HOM05D007489 ORTHO05D008037 1.8e-34 151.4 454 32.8
Glyma.07G204500 Glycine max HOM05D007489 ORTHO05D008037 1.2e-33 148.7 490 31.6
Dinv40650 Davidia involucrata HOM05D007489 ORTHO05D008037 1.5e-33 148.3 398 33.7
CSS0034374 Camellia sinensis var. sinensis HOM05D007489 ORTHO05D008037 1.2e-30 138.7 347 34.0
Potri.011G063500 Populus trichocarpa HOM05D007489 ORTHO05D008037 1.6e-30 138.3 452 29.4
Duzib235G0638 Durio zibethinus HOM05D007489 ORTHO05D008037 2.7e-30 137.5 483 30.6
Sabra11G0045300 Salix brachista HOM05D007489 ORTHO05D008037 6.0e-30 136.3 424 29.7
TPR.G16271 Trifolium pratense HOM05D007489 ORTHO05D008037 1.3e-29 135.2 437 31.1
CANSAT54G0123 Cannabis sativa HOM05D007489 ORTHO05D008037 1.1e-28 132.1 462 30.7
Prupe.4G057700 Prunus persica HOM05D007489 ORTHO05D008037 1.5e-28 131.7 429 32.4
Manes.16G035700 Manihot esculenta HOM05D007489 ORTHO05D008037 3.3e-28 130.6 434 31.8
TAR627G1016 Trochodendron aralioides HOM05D007489 ORTHO05D008037 3.3e-28 130.6 400 32.5
MD10G1283800 Malus domestica HOM05D007489 ORTHO05D008037 4.3e-28 130.2 396 31.8
Haze_06275 Corylus avellana HOM05D007489 ORTHO05D008037 1.4e-26 125.2 262 35.5
Duzib192G0524 Durio zibethinus HOM05D007489 ORTHO05D008037 9.0e-26 122.5 424 31.6
Medtr4g087875 Medicago truncatula HOM05D007489 ORTHO05D008037 2.0e-25 121.3 434 29.5
GSVIVG01021171001 Vitis vinifera HOM05D007489 ORTHO05D008037 4.5e-25 120.2 451 29.5
Hma1.2p1_0155F.1_g068400 Hydrangea macrophylla HOM05D007489 ORTHO05D008037 1.3e-24 118.6 345 32.2
QL05p044409 Quercus lobata HOM05D007489 ORTHO05D008037 1.3e-24 118.6 406 31.3
Rhsim02G0140400 Rhododendron simsii HOM05D007489 ORTHO05D008037 4.9e-24 116.7 442 31.9
FAN08G0692 Fragaria x ananassa HOM05D007489 ORTHO05D008037 3.2e-23 114.0 424 30.0
FAN18G0613 Fragaria x ananassa HOM05D007489 ORTHO05D008037 9.3e-23 112.5 424 30.2
Gorai.011G033000 Gossypium raimondii HOM05D007489 ORTHO05D008037 9.3e-23 112.5 450 29.1
FAN04G2784 Fragaria x ananassa HOM05D007489 ORTHO05D008037 1.2e-22 112.1 423 29.1
Phvul.003G057800 Phaseolus vulgaris HOM05D007489 ORTHO05D008037 1.2e-22 112.1 478 27.4
FvH4_5g26040 Fragaria vesca HOM05D007489 ORTHO05D008037 1.6e-22 111.7 424 30.0
RcHm_v2.0_Chr7g0216741 Rosa chinensis HOM05D007489 ORTHO05D008037 1.6e-22 111.7 416 31.5
RcHm_v2.0_Chr7g0215591 Rosa chinensis HOM05D007489 ORTHO05D008037 4.6e-22 110.2 342 32.7
Ca_26049_v3 Cicer arietinum L. HOM05D007489 ORTHO05D008037 3.3e-20 104.0 416 28.1
PSO063G1126 Papaver somniferum HOM05D007489 ORTHO05D008037 4.3e-20 103.6 411 29.2
DCAR_004024 Daucus carota HOM05D007489 ORTHO05D008037 8.2e-19 99.4 377 29.2
ClCG01G023550 Citrullus lanatus HOM05D007489 ORTHO05D008037 1.1e-18 99.0 361 29.9
Thhalv10024499m.g Eutrema salsugineum HOM05D010718 ORTHO05D008037 1.8e-18 98.2 372 27.4
Nn1g09012 Nelumbo nucifera HOM05D007489 ORTHO05D008037 2.4e-18 97.8 393 29.8
AT4G18490 Arabidopsis thaliana HOM05D010718 ORTHO05D008037 3.1e-18 97.4 379 27.2
Lj1A1196T41 Lonicera japonica HOM05D007489 ORTHO05D008037 3.1e-18 97.4 309 29.4
Sed0003654 Sechium edule HOM05D007489 ORTHO05D008037 3.1e-18 97.4 320 31.9
HanXRQChr11g0327141 Helianthus annuus HOM05D007489 ORTHO05D008037 1.3e-16 92.0 347 29.7
Carub.0007s2274 Capsella rubella HOM05D010718 ORTHO05D008037 2.9e-16 90.9 402 26.1
CARHR225330 Cardamine hirsuta HOM05D010718 ORTHO05D008037 3.8e-16 90.5 389 25.7
Oeu041109.2 Olea europaea HOM05D007489 ORTHO05D008037 5.0e-16 90.1 395 27.8
AL7G35790 Arabidopsis lyrata HOM05D010718 ORTHO05D008037 6.5e-16 89.7 378 27.0
arahy.Tifrunner.gnm1.ann1.S0ULK2 Arachis hypogaea HOM05D007489 ORTHO05D008037 6.5e-16 89.7 323 31.3
Lj4g0021888 Lotus japonicus HOM05D007489 ORTHO05D008037 8.4e-16 89.4 306 30.7
BcaNung02709 Brassica carinata HOM05D010718 ORTHO05D008037 1.1e-15 89.0 372 28.0
Sp7g15530 Schrenkiella parvula HOM05D010718 ORTHO05D008037 1.1e-15 89.0 399 26.8
C07p49740 Brassica napus HOM05D010718 ORTHO05D008037 1.4e-15 88.6 340 28.2
BolC7t45475H Brassica oleracea HOM05D010718 ORTHO05D008037 1.4e-15 88.6 340 28.2
Glyma.13G171550 Glycine max HOM05D007489 ORTHO05D008037 7.2e-15 86.3 244 31.6
EL10Ac8g20488 Beta vulgaris HOM05D007489 ORTHO05D008037 1.2e-14 85.5 344 26.2
BcaC06g30581 Brassica carinata HOM05D010718 ORTHO05D008037 1.2e-14 85.5 375 26.4
BraA03t14214Z Brassica rapa HOM05D010718 ORTHO05D008037 1.6e-14 85.1 347 26.8
Sc05g0007220 Simmondsia chinensis HOM05D007489 ORTHO05D008037 1.8e-13 81.6 315 28.3
FAN13G1982 Fragaria x ananassa HOM05D007489 ORTHO05D008037 6.7e-13 79.7 292 30.8
AUR62036546 Chenopodium quinoa HOM05D007489 ORTHO05D008037 1.1e-12 79.0 375 27.2
Lsat_1_v5_gn_4_50401 Lactuca sativa HOM05D007489 ORTHO05D008037 1.1e-12 79.0 293 28.7
Aqoxy5G02160 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 3.3e-12 77.4 377 26.3
C01p12440 Brassica napus HOM05D010718 ORTHO05D008037 5.7e-12 76.6 399 25.1
A01p10500 Brassica napus HOM05D010718 ORTHO05D008037 1.3e-11 75.5 395 26.1
Ciclev10017982m.g Citrus clementina HOM05D007489 ORTHO05D008037 1.6e-11 75.1 278 28.8
PGR004G0633 Punica granatum HOM05D007489 ORTHO05D008037 2.8e-11 74.3 345 25.5
MBI06_g31402_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 8.2e-11 72.8 371 26.4
A03p51330 Brassica napus HOM05D010718 ORTHO05D008037 1.8e-10 71.6 375 25.1
BraA01t00996Z Brassica rapa HOM05D010718 ORTHO05D008037 2.4e-10 71.2 402 24.9
MD05G1304700 Malus domestica HOM05D007489 ORTHO05D008037 5.3e-10 70.1 245 28.6
ECA234G3308 Erigeron canadensis HOM05D007489 ORTHO05D008037 6.9e-10 69.7 67 58.2
Peaxi162Scf00223g01419 Petunia axillaris HOM05D007489 ORTHO05D008037 9.0e-10 69.3 44 75.0
MELO3C007230.2 Cucumis melo HOM05D007489 ORTHO05D008037 7.7e-09 66.2 379 27.7
Aa31LG6G1240 Aethionema arabicum HOM05D010718 ORTHO05D008037 1.3e-08 65.5 40 72.5
CAN.G79.55 Capsicum annuum HOM05D007489 ORTHO05D008037 1.7e-08 65.1 44 65.9
CsaV3_6G050690 Cucumis sativus L. HOM05D007489 ORTHO05D008037 5.0e-08 63.5 338 28.4
Migut.J01535 Erythranthe guttata HOM05D007489 ORTHO05D008037 1.1e-07 62.4 70 44.3
Nitab4.5_0001928g0060 Nicotiana tabacum HOM05D007489 ORTHO05D008037 2.5e-07 61.2 44 61.4
arahy.Tifrunner.gnm1.ann1.8IS92U Arachis hypogaea HOM05D007489 ORTHO05D008037 5.5e-07 60.1 35 77.1
Thecc.06G175600 Theobroma cacao HOM05D007489 ORTHO05D008037 9.4e-07 59.3 369 23.6
Solyc02g077210.1 Solanum lycopersicum HOM05D007489 ORTHO05D008037 4.6e-06 57.0 238 24.8


User provided reference genes

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