Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc7.159 Carica papaya HOM05D005314 ORTHO05D006522 8.8e-85 317.0 170 100.0
QL02p000736 Quercus lobata HOM05D005314 ORTHO05D006522 3.4e-60 235.3 164 76.2
Sp6g31630 Schrenkiella parvula HOM05D005314 ORTHO05D006522 8.3e-59 230.7 163 76.1
Haze_18156 Corylus avellana HOM05D005314 ORTHO05D006522 1.1e-58 230.3 165 74.5
THA.LOC104811236 Tarenaya hassleriana HOM05D005314 ORTHO05D006522 1.1e-58 230.3 163 76.7
Manes.03G050000 Manihot esculenta HOM05D005314 ORTHO05D006522 1.4e-58 229.9 165 73.9
C09p64870 Brassica napus HOM05D005314 ORTHO05D006522 5.4e-58 228.0 163 75.5
AT5G11960 Arabidopsis thaliana HOM05D005314 ORTHO05D006522 7.0e-58 227.6 163 74.2
A10p25800 Brassica napus HOM05D005314 ORTHO05D006522 9.2e-58 227.3 163 75.5
BraA10t44644Z Brassica rapa HOM05D005314 ORTHO05D006522 9.2e-58 227.3 163 75.5
Cfa017974 Carpinus fangiana HOM05D005314 ORTHO05D006522 9.2e-58 227.3 165 73.3
AL6G22740 Arabidopsis lyrata HOM05D005314 ORTHO05D006522 1.2e-57 226.9 163 74.2
BolC9t59318H Brassica oleracea HOM05D005314 ORTHO05D006522 2.0e-57 226.1 163 74.8
Potri.006G226000 Populus trichocarpa HOM05D005314 ORTHO05D006522 2.0e-57 226.1 164 71.3
BcaNung02637 Brassica carinata HOM05D005314 ORTHO05D006522 4.5e-57 224.9 163 73.6
A02p01290 Brassica napus HOM05D005314 ORTHO05D006522 4.5e-57 224.9 163 73.6
BraA02t05108Z Brassica rapa HOM05D005314 ORTHO05D006522 4.5e-57 224.9 163 73.6
Gohir.D13G194600 Gossypium hirsutum HOM05D005314 ORTHO05D006522 4.5e-57 224.9 165 72.7
Gorai.013G220600 Gossypium raimondii HOM05D005314 ORTHO05D006522 4.5e-57 224.9 165 72.7
Thecc.09G057100 Theobroma cacao HOM05D005314 ORTHO05D006522 4.5e-57 224.9 165 72.1
Eucgr.C03058 Eucalyptus grandis HOM05D005314 ORTHO05D006522 5.9e-57 224.6 165 75.8
BcaC03g13403 Brassica carinata HOM05D005314 ORTHO05D006522 1.3e-56 223.4 163 73.0
C02p05500 Brassica napus HOM05D005314 ORTHO05D006522 1.3e-56 223.4 163 73.0
BolC2t06496H Brassica oleracea HOM05D005314 ORTHO05D006522 1.3e-56 223.4 163 73.0
CARHR201170 Cardamine hirsuta HOM05D005314 ORTHO05D006522 1.7e-56 223.0 163 73.0
Dinv22878 Davidia involucrata HOM05D005314 ORTHO05D006522 1.7e-56 223.0 164 71.3
Gohir.A13G187700 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.7e-56 223.0 165 72.1
Thhalv10014010m.g Eutrema salsugineum HOM05D005314 ORTHO05D006522 2.3e-56 222.6 163 74.2
Aa31LG3G15270 Aethionema arabicum HOM05D005314 ORTHO05D006522 3.8e-56 221.9 163 73.0
COL.COLO4_21084 Corchorus olitorius HOM05D005314 ORTHO05D006522 3.8e-56 221.9 165 72.1
Carub.0006s1050 Capsella rubella HOM05D005314 ORTHO05D006522 2.5e-55 219.2 163 71.8
CiPaw.15G037000 Carya illinoinensis HOM05D005314 ORTHO05D006522 3.3e-55 218.8 165 72.1
Prupe.1G409300 Prunus persica HOM05D005314 ORTHO05D006522 3.3e-55 218.8 165 69.7
Gorai.001G022500 Gossypium raimondii HOM05D005314 ORTHO05D006522 4.3e-55 218.4 165 69.7
Potri.018G060500 Populus trichocarpa HOM05D005314 ORTHO05D006522 4.3e-55 218.4 164 70.7
Actinidia30326 Actinidia chinensis HOM05D005314 ORTHO05D006522 5.6e-55 218.0 166 69.9
Hma1.2p1_0544F.1_g175630 Hydrangea macrophylla HOM05D005314 ORTHO05D006522 5.6e-55 218.0 164 68.9
Gohir.A07G021950 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.2e-54 216.9 165 69.1
Glyma.14G097400 Glycine max HOM05D005314 ORTHO05D006522 4.7e-54 214.9 164 70.1
CiPaw.16G027100 Carya illinoinensis HOM05D005314 ORTHO05D006522 6.1e-54 214.5 165 72.1
SGA_v2.0_scaffold20G09204 Striga asiatica HOM05D005314 ORTHO05D006522 8.0e-54 214.2 165 70.3
TAR369G0158 Trochodendron aralioides HOM05D005314 ORTHO05D006522 8.0e-54 214.2 165 71.5
TAR636G1106 Trochodendron aralioides HOM05D005314 ORTHO05D006522 8.0e-54 214.2 165 71.5
CSS0005464 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 3.0e-53 212.2 166 68.7
Migut.A00114 Erythranthe guttata HOM05D005314 ORTHO05D006522 3.0e-53 212.2 171 65.5
Glyma.17G227100 Glycine max HOM05D005314 ORTHO05D006522 6.8e-53 211.1 164 69.5
Ciclev10008891m.g Citrus clementina HOM05D005314 ORTHO05D006522 8.9e-53 210.7 165 70.3
PGR044G2019 Punica granatum HOM05D005314 ORTHO05D006522 1.5e-52 209.9 166 68.7
Nitab4.5_0000268g0140 Nicotiana tabacum HOM05D005314 ORTHO05D006522 2.0e-52 209.5 164 67.1
GSVIVG01035376001 Vitis vinifera HOM05D005314 ORTHO05D006522 2.0e-52 209.5 168 69.0
Sabra18G0054400 Salix brachista HOM05D005314 ORTHO05D006522 2.6e-52 209.1 165 67.9
CANSAT25G2280 Cannabis sativa HOM05D005314 ORTHO05D006522 3.4e-52 208.8 167 70.1
TWI34G0632 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 3.4e-52 208.8 165 68.5
TWI32G0330 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 7.5e-52 207.6 165 67.9
vmacro00123 Vaccinium macrocarpon HOM05D005314 ORTHO05D006522 7.5e-52 207.6 165 66.7
VMungo0647G2045 Vigna mungo HOM05D005314 ORTHO05D006522 9.8e-52 207.2 164 67.7
Rhsim11G0042200 Rhododendron simsii HOM05D005314 ORTHO05D006522 1.7e-51 206.5 165 67.3
RcHm_v2.0_Chr6g0311221 Rosa chinensis HOM05D005314 ORTHO05D006522 1.7e-51 206.5 164 65.9
Phvul.001G037500 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 2.2e-51 206.1 164 66.5
MSTRG.25961 Avicennia marina HOM05D005314 ORTHO05D006522 2.9e-51 205.7 165 67.3
MD15G1056700 Malus domestica HOM05D005314 ORTHO05D006522 2.9e-51 205.7 164 67.1
Glyma.04G052700 Glycine max HOM05D005314 ORTHO05D006522 3.7e-51 205.3 165 68.5
PSO210G6435 Papaver somniferum HOM05D005314 ORTHO05D006522 6.4e-51 204.5 166 66.3
MD08G1064900 Malus domestica HOM05D005314 ORTHO05D006522 1.1e-50 203.8 164 65.9
Ca_13152_v3 Cicer arietinum L. HOM05D005314 ORTHO05D006522 2.4e-50 202.6 164 67.7
FvH4_2g31600 Fragaria vesca HOM05D005314 ORTHO05D006522 2.4e-50 202.6 164 64.6
FAN15G2750 Fragaria x ananassa HOM05D005314 ORTHO05D006522 2.4e-50 202.6 164 64.6
FAN24G2134 Fragaria x ananassa HOM05D005314 ORTHO05D006522 2.4e-50 202.6 164 64.6
Nn8g38796 Nelumbo nucifera HOM05D005314 ORTHO05D006522 2.4e-50 202.6 165 67.3
PSO210G6321 Papaver somniferum HOM05D005314 ORTHO05D006522 4.1e-50 201.8 166 65.7
Solyc06g036780.3 Solanum lycopersicum HOM05D005314 ORTHO05D006522 4.1e-50 201.8 165 63.6
Sopen06g012940 Solanum pennellii HOM05D005314 ORTHO05D006522 4.1e-50 201.8 165 63.6
CAN.G130.11 Capsicum annuum HOM05D005314 ORTHO05D006522 5.4e-50 201.4 165 64.2
FAN27G1630 Fragaria x ananassa HOM05D005314 ORTHO05D006522 7.0e-50 201.1 164 64.0
Lj1g0000731 Lotus japonicus HOM05D005314 ORTHO05D006522 7.0e-50 201.1 165 66.1
SalBow4G3021 Salvia bowleyana HOM05D005314 ORTHO05D006522 7.0e-50 201.1 165 64.2
CsaV3_4G035770 Cucumis sativus L. HOM05D005314 ORTHO05D006522 1.2e-49 200.3 165 66.1
AUR62009122 Chenopodium quinoa HOM05D005314 ORTHO05D006522 2.0e-49 199.5 160 68.1
Lj8A530G14 Lonicera japonica HOM05D005314 ORTHO05D006522 2.7e-49 199.1 168 64.9
Psat6g021480 Pisum sativum HOM05D005314 ORTHO05D006522 3.5e-49 198.7 163 67.5
DCAR_007733 Daucus carota HOM05D005314 ORTHO05D006522 5.9e-49 198.0 163 64.4
TPR.G13039 Trifolium pratense HOM05D005314 ORTHO05D006522 1.0e-48 197.2 165 66.7
Ah.10g034130 Amaranthus hybridus HOM05D005314 ORTHO05D006522 1.3e-48 196.8 165 64.2
Sed0024799 Sechium edule HOM05D005314 ORTHO05D006522 1.3e-48 196.8 162 66.7
Glyma.06G053100 Glycine max HOM05D005314 ORTHO05D006522 2.3e-48 196.1 164 66.5
Cc08_g10890 Coffea canephora HOM05D005314 ORTHO05D006522 3.0e-48 195.7 165 65.5
Sed0001440 Sechium edule HOM05D005314 ORTHO05D006522 6.6e-48 194.5 161 64.6
Lsat_1_v5_gn_6_14601 Lactuca sativa HOM05D005314 ORTHO05D006522 8.6e-48 194.1 160 63.1
ClCG05G017990 Citrullus lanatus HOM05D005314 ORTHO05D006522 1.5e-47 193.4 164 65.2
Lalb_Chr11g0063171 Lupinus albus HOM05D005314 ORTHO05D006522 1.5e-47 193.4 165 66.7
Medtr1g015820 Medicago truncatula HOM05D005314 ORTHO05D006522 2.5e-47 192.6 165 64.2
Aqoxy7G04033 Aquilegia oxysepala HOM05D000411 ORTHO05D006522 4.3e-47 191.8 157 63.7
ECA233G4949 Erigeron canadensis HOM05D005314 ORTHO05D006522 1.2e-46 190.3 164 63.4
ATR0789G137 Amborella trichopoda HOM05D005314 ORTHO05D006522 2.1e-46 189.5 165 62.4
Sc23g0005690 Simmondsia chinensis HOM05D005314 ORTHO05D006522 3.6e-46 188.7 163 63.2
arahy.Tifrunner.gnm1.ann1.GAY7D4 Arachis hypogaea HOM05D005314 ORTHO05D006522 4.7e-46 188.3 164 64.0
Phvul.009G078900 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 6.2e-46 188.0 156 63.5
VMungo1309G2963 Vigna mungo HOM05D005314 ORTHO05D006522 6.2e-46 188.0 156 64.7
Sabra06G0174700 Salix brachista HOM05D005314 ORTHO05D006522 1.0e-45 187.2 238 48.7
CDE06G1634 Ceratophyllum demersum HOM05D005314 ORTHO05D006522 1.8e-45 186.4 164 65.9
Hund19438 Selenicereus undatus HOM05D005314 ORTHO05D006522 1.8e-45 186.4 163 65.0
arahy.Tifrunner.gnm1.ann1.UTD444 Arachis hypogaea HOM05D005314 ORTHO05D006522 1.2e-44 183.7 164 62.8
HPP92_007653 Vanilla planifolia HOM05D005314 ORTHO05D006522 2.9e-43 179.1 164 60.4
HanXRQChr08g0226511 Helianthus annuus HOM05D005314 ORTHO05D006522 4.1e-42 175.3 164 59.8
MELO3C016882.2 Cucumis melo HOM05D005314 ORTHO05D006522 5.4e-42 174.9 165 60.6
Peaxi162Scf01088g00005 Petunia axillaris HOM05D005314 ORTHO05D006522 3.5e-41 172.2 145 64.1
MBI01_g21122_MAGBIO Magnolia biondii HOM05D005314 ORTHO05D006522 3.0e-40 169.1 165 58.8
Zm00001eb155260 Zea mays HOM05D005314 ORTHO05D006522 5.0e-40 168.3 165 56.4
Lalb_Chr22g0356141 Lupinus albus HOM05D005314 ORTHO05D006522 8.6e-40 167.5 117 70.1
arahy.Tifrunner.gnm1.ann1.6D5JL1 Arachis hypogaea HOM05D005314 ORTHO05D006522 1.5e-39 166.8 138 68.8
arahy.Tifrunner.gnm1.ann1.IMU44M Arachis hypogaea HOM05D005314 ORTHO05D006522 7.3e-39 164.5 138 68.1
arahy.Tifrunner.gnm1.ann1.VQ1HGR Arachis hypogaea HOM05D005314 ORTHO05D006522 1.2e-38 163.7 138 67.4
unitig_88.g27677 Utricularia gibba HOM05D005314 ORTHO05D006522 5.8e-36 154.8 163 55.2
Atru.chr7.1939 Acer truncatum HOM05D005314 ORTHO05D006522 4.9e-35 151.8 92 78.3
PGSC0003DMG400031356 Solanum tuberosum HOM05D005314 ORTHO05D006522 4.9e-35 151.8 132 64.4
Lalb_Chr14g0366381 Lupinus albus HOM05D005314 ORTHO05D006522 2.4e-34 149.4 92 78.3
CSS0003098 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 7.1e-34 147.9 92 76.1
Hund03325 Selenicereus undatus HOM05D005314 ORTHO05D006522 9.2e-34 147.5 137 57.7
Oeu003996.1 Olea europaea HOM05D005314 ORTHO05D006522 4.7e-30 135.2 103 68.0
Mapoly0049s0128 Marchantia polymorpha HOM05D005314 ORTHO05D006522 4.9e-27 125.2 117 58.1
Nitab4.5_0000972g0030 Nicotiana tabacum HOM05D005314 ORTHO05D006522 1.1e-26 124.0 125 60.0
Lj7A260G18 Lonicera japonica HOM05D005314 ORTHO05D006522 4.1e-26 122.1 101 67.3
Pp3c7_50 Physcomitrium patens HOM05D005314 ORTHO05D006522 7.1e-26 121.3 117 52.1
EL10Ac2g03829 Beta vulgaris HOM05D005314 ORTHO05D006522 4.6e-25 118.6 121 57.9
CBR_g50008 Chara braunii HOM05D005314 ORTHO05D006522 1.3e-24 117.1 135 48.1
CSS0034519 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 8.1e-22 107.8 94 61.7
Gohir.D07G021800 Gossypium hirsutum HOM05D005314 ORTHO05D006522 7.6e-20 101.3 95 62.1
arahy.Tifrunner.gnm1.ann1.TY68CU Arachis hypogaea HOM05D005314 ORTHO05D005864 1.1e-18 97.4 106 58.5
Duzib150G1607 Durio zibethinus HOM05D005314 ORTHO05D006522 7.6e-12 74.7 42 76.2
PRCOL_00001271 Prasinoderma coloniale HOM05D005314 ORTHO05D006522 1.3e-11 73.9 99 38.4
Cre10.g419700 Chlamydomonas reinhardtii HOM05D005314 ORTHO05D006522 1.7e-11 73.6 115 38.3
MD11G1243300 Malus domestica HOM05D005314 ORTHO05D006522 2.1e-09 66.6 42 64.3
Dinv28005 Davidia involucrata HOM05D005314 ORTHO05D006522 7.9e-09 64.7 42 64.3
MCO12G408 Micromonas commoda HOM05D005314 ORTHO05D006522 3.9e-08 62.4 103 39.8


User provided reference genes

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