Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc685.1 Carica papaya HOM05D006234 ORTHO05D007813 4.3e-68 261.2 129 100.0
Dinv38575 Davidia involucrata HOM05D006234 ORTHO05D007813 2.9e-19 99.0 136 45.6
Actinidia19102 Actinidia chinensis HOM05D006234 ORTHO05D007813 9.2e-18 94.0 109 50.5
Lj9A446T64 Lonicera japonica HOM05D006234 ORTHO05D007813 2.5e-15 85.9 138 44.2
CSS0048541 Camellia sinensis var. sinensis HOM05D006234 ORTHO05D007813 1.1e-13 80.5 112 47.3
CSS0047520 Camellia sinensis var. sinensis HOM05D006234 ORTHO05D007813 1.4e-13 80.1 112 47.3
GSVIVG01007727001 Vitis vinifera HOM05D006234 ORTHO05D007813 1.4e-13 80.1 109 47.7
Haze_07514 Corylus avellana HOM05D006234 ORTHO05D007813 2.3e-13 79.3 109 45.0
MD14G1178600 Malus domestica HOM05D006234 ORTHO05D007813 5.2e-13 78.2 113 45.1
Potri.012G082300 Populus trichocarpa HOM05D006234 ORTHO05D007813 8.9e-13 77.4 109 50.5
Cfa019148 Carpinus fangiana HOM05D006234 ORTHO05D007813 1.2e-12 77.0 109 44.0
MD06G1172700 Malus domestica HOM05D006234 ORTHO05D007813 2.6e-12 75.9 110 46.4
Prupe.5G172000 Prunus persica HOM05D006234 ORTHO05D007813 2.6e-12 75.9 109 43.1
Sabra15G0102700 Salix brachista HOM05D006234 ORTHO05D007813 3.4e-12 75.5 109 51.4
CiPaw.12G027800 Carya illinoinensis HOM05D006234 ORTHO05D007813 7.5e-12 74.3 110 44.5
Duzib205G1984 Durio zibethinus HOM05D006234 ORTHO05D007813 9.8e-12 73.9 114 48.2
Hma1.2p1_0592F.1_g185420 Hydrangea macrophylla HOM05D006234 ORTHO05D007813 1.3e-11 73.6 130 40.8
COL.COLO4_30066 Corchorus olitorius HOM05D006234 ORTHO05D007813 2.2e-11 72.8 115 47.8
Thecc.03G014200 Theobroma cacao HOM05D006234 ORTHO05D007813 2.2e-11 72.8 116 47.4
Potri.015G078100 Populus trichocarpa HOM05D006234 ORTHO05D007813 2.9e-11 72.4 109 47.7
TAR622G1324 Trochodendron aralioides HOM05D006234 ORTHO05D007813 2.9e-11 72.4 109 45.0
Nn4g22716 Nelumbo nucifera HOM05D006234 ORTHO05D007813 1.1e-10 70.5 109 42.2
DCAR_026145 Daucus carota HOM05D007767 ORTHO05D010057 2.4e-10 69.3 112 43.8
Gohir.A12G274800 Gossypium hirsutum HOM05D006234 ORTHO05D007813 2.4e-10 69.3 116 44.8
Gorai.008G296000 Gossypium raimondii HOM05D006234 ORTHO05D007813 2.4e-10 69.3 116 44.8
PGR044G0892 Punica granatum HOM05D006234 ORTHO05D007813 2.4e-10 69.3 109 41.3
Gohir.D12G275500 Gossypium hirsutum HOM05D006234 ORTHO05D007813 3.2e-10 68.9 116 44.8
MELO3C002271.2 Cucumis melo HOM05D006234 ORTHO05D007813 9.2e-10 67.4 109 42.2
CsaV3_1G008570 Cucumis sativus L. HOM05D006234 ORTHO05D007813 9.2e-10 67.4 109 42.2
ClCG01G013210 Citrullus lanatus HOM05D006234 ORTHO05D007813 2.0e-09 66.2 109 40.4
Sed0024030 Sechium edule HOM05D006234 ORTHO05D007813 2.0e-09 66.2 109 38.5
Sabra12G0058900 Salix brachista HOM05D006234 ORTHO05D007813 3.5e-09 65.5 109 44.0
RcHm_v2.0_Chr7g0193391 Rosa chinensis HOM05D006234 ORTHO05D007813 4.6e-09 65.1 109 43.1
Atru.chr9.2492 Acer truncatum HOM05D006234 ORTHO05D007813 3.0e-08 62.4 110 39.1
Cc04_g12080 Coffea canephora HOM05D006234 ORTHO05D007813 5.0e-08 61.6 116 41.4
Lsat_1_v5_gn_5_15020 Lactuca sativa HOM05D006234 ORTHO05D007813 6.6e-08 61.2 110 41.8
FAN04G0097 Fragaria x ananassa HOM05D006234 ORTHO05D007813 8.6e-08 60.8 109 43.1
Rhsim12G0165600 Rhododendron simsii HOM05D006234 ORTHO05D007813 8.6e-08 60.8 111 44.1
CANSAT80G1835 Cannabis sativa HOM05D006234 ORTHO05D007813 1.1e-07 60.5 113 41.6
Manes.06G106000 Manihot esculenta HOM05D006234 ORTHO05D007813 1.9e-07 59.7 110 40.9
vmacro16618 Vaccinium macrocarpon HOM05D006234 ORTHO05D007813 3.3e-07 58.9 111 39.6
Manes.14G064600 Manihot esculenta HOM05D006234 ORTHO05D007813 5.6e-07 58.2 105 40.0
FvH4_5g05440 Fragaria vesca HOM05D006234 ORTHO05D007813 9.5e-07 57.4 109 42.2
FAN18G0739 Fragaria x ananassa HOM05D006234 ORTHO05D007813 9.5e-07 57.4 109 42.2
FAN18G3270 Fragaria x ananassa HOM05D006234 ORTHO05D007813 9.5e-07 57.4 109 42.2
Nitab4.5_0000025g0560 Nicotiana tabacum HOM05D006234 ORTHO05D007813 9.5e-07 57.4 109 38.5
Peaxi162Scf00255g01121 Petunia axillaris HOM05D006234 ORTHO05D007813 9.5e-07 57.4 103 37.9
THA.LOC104809262 Tarenaya hassleriana HOM05D006234 ORTHO05D007813 1.2e-06 57.0 121 40.5
FAN08G0279 Fragaria x ananassa HOM05D006234 ORTHO05D007813 1.6e-06 56.6 109 40.4
Nn3g16823 Nelumbo nucifera HOM05D006234 ORTHO05D007813 1.6e-06 56.6 137 32.8
TAR629G2947 Trochodendron aralioides HOM05D006234 ORTHO05D007813 1.6e-06 56.6 109 37.6
Hund02751 Selenicereus undatus HOM05D006234 ORTHO05D007813 2.1e-06 56.2 115 40.0
MBI10_g27998_MAGBIO Magnolia biondii HOM05D006234 ORTHO05D007813 2.8e-06 55.8 112 39.3


User provided reference genes

Program Settings