Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc682.2 Carica papaya HOM05D007501 ORTHO05D009528 3.5e-137 491.5 230 100.0
Gohir.A11G289800 Gossypium hirsutum HOM05D007501 ORTHO05D009528 2.3e-40 169.9 159 52.2
Gorai.007G332200 Gossypium raimondii HOM05D007501 ORTHO05D009528 8.9e-40 167.9 159 53.5
Gohir.D11G302600 Gossypium hirsutum HOM05D007501 ORTHO05D009528 2.0e-39 166.8 159 52.8
COL.COLO4_03607 Corchorus olitorius HOM05D007501 ORTHO05D009528 4.1e-37 159.1 158 49.4
QL08p025249 Quercus lobata HOM05D007501 ORTHO05D009528 9.2e-37 157.9 174 51.1
TWI39G1127 Tripterygium wilfordii HOM05D007501 ORTHO05D009528 7.3e-34 148.3 175 45.7
Manes.15G099000 Manihot esculenta HOM05D007501 ORTHO05D009528 1.6e-33 147.1 171 48.5
RcHm_v2.0_Chr5g0029351 Rosa chinensis HOM05D007501 ORTHO05D009528 1.6e-33 147.1 174 50.6
Thecc.07G134800 Theobroma cacao HOM05D007501 ORTHO05D009528 2.8e-33 146.4 159 47.8
Potri.011G103500 Populus trichocarpa HOM05D007501 ORTHO05D009528 3.6e-33 146.0 166 45.8
MD03G1250700 Malus domestica HOM05D007501 ORTHO05D009528 6.2e-33 145.2 165 47.9
Duzib213G0875 Durio zibethinus HOM05D007501 ORTHO05D009528 1.4e-32 144.1 152 46.7
GSVIVG01014087001 Vitis vinifera HOM05D007501 ORTHO05D009528 6.8e-32 141.7 162 43.8
CSS0000849 Camellia sinensis var. sinensis HOM05D007501 ORTHO05D009528 8.9e-32 141.4 163 46.6
MD11G1270900 Malus domestica HOM05D007501 ORTHO05D009528 8.9e-32 141.4 164 47.6
Haze_08443 Corylus avellana HOM05D007501 ORTHO05D009528 3.4e-31 139.4 169 46.2
Sabra11G0077300 Salix brachista HOM05D007501 ORTHO05D009528 4.4e-31 139.0 168 44.6
Sabra11G0082200 Salix brachista HOM05D007501 ORTHO05D009528 4.4e-31 139.0 168 44.6
FAN21G3657 Fragaria x ananassa HOM05D007501 ORTHO05D009528 1.3e-30 137.5 167 46.7
Manes.03G078700 Manihot esculenta HOM05D007501 ORTHO05D009528 1.7e-30 137.1 173 45.7
vmacro09418 Vaccinium macrocarpon HOM05D007501 ORTHO05D009528 1.7e-30 137.1 169 45.6
FvH4_3g17620 Fragaria vesca HOM05D007501 ORTHO05D009528 3.8e-30 136.0 167 46.1
FAN11G3003 Fragaria x ananassa HOM05D007501 ORTHO05D009528 3.8e-30 136.0 167 46.1
Eucgr.F01372 Eucalyptus grandis HOM05D007501 ORTHO05D009528 6.4e-30 135.2 163 46.6
Oeu059251.1 Olea europaea HOM05D007501 ORTHO05D009528 1.4e-29 134.0 160 46.9
FAN25G1377 Fragaria x ananassa HOM05D007501 ORTHO05D009528 2.4e-29 133.3 167 45.5
Cfa019508 Carpinus fangiana HOM05D007501 ORTHO05D009528 4.2e-29 132.5 177 44.6
Potri.001G382800 Populus trichocarpa HOM05D007501 ORTHO05D009528 4.6e-28 129.0 171 42.7
Actinidia03620 Actinidia chinensis HOM05D007501 ORTHO05D009528 7.8e-28 128.3 167 41.3
RhsimUnG0206300 Rhododendron simsii HOM05D007501 ORTHO05D009528 1.3e-27 127.5 155 43.9
Lj3g0021891 Lotus japonicus HOM05D007501 ORTHO05D009528 2.3e-27 126.7 181 42.5
Nn3g20958 Nelumbo nucifera HOM05D007501 ORTHO05D009528 2.3e-27 126.7 157 45.9
Prupe.4G155600 Prunus persica HOM05D007501 ORTHO05D009528 3.9e-27 125.9 167 43.1
Cc05_g10640 Coffea canephora HOM05D007501 ORTHO05D009528 5.1e-27 125.6 161 41.6
Ciclev10024060m.g Citrus clementina HOM05D007501 ORTHO05D009528 7.3e-26 121.7 164 40.2
DCAR_019618 Daucus carota HOM05D007501 ORTHO05D009528 2.1e-25 120.2 172 41.3
Dinv13355 Davidia involucrata HOM05D007501 ORTHO05D009528 3.6e-25 119.4 168 42.3
Glyma.15G210500 Glycine max HOM05D007501 ORTHO05D009528 3.6e-25 119.4 193 38.9
PSO541G4098 Papaver somniferum HOM05D007501 ORTHO05D009528 6.2e-25 118.6 162 40.1
PGSC0003DMG400021255 Solanum tuberosum HOM05D007501 ORTHO05D009528 6.2e-25 118.6 157 41.4
Glyma.15G211700 Glycine max HOM05D007501 ORTHO05D009528 3.1e-24 116.3 193 38.3
PSO675G1715 Papaver somniferum HOM05D007501 ORTHO05D009528 4.0e-24 115.9 162 40.1
Psat4g135600 Pisum sativum HOM05D007501 ORTHO05D009528 1.5e-23 114.0 202 38.1
HanXRQChr11g0331231 Helianthus annuus HOM05D007501 ORTHO05D009528 2.0e-23 113.6 158 41.8
Peaxi162Scf01338g00001 Petunia axillaris HOM05D007501 ORTHO05D009528 4.4e-23 112.5 154 40.3
Solyc10g007490.2 Solanum lycopersicum HOM05D007501 ORTHO05D009528 7.6e-23 111.7 157 41.4
ECA236G0060 Erigeron canadensis HOM05D007501 ORTHO05D009528 1.3e-22 110.9 170 37.1
Sopen10g003430 Solanum pennellii HOM05D007501 ORTHO05D009528 1.7e-22 110.5 153 41.8
arahy.Tifrunner.gnm1.ann1.5U50EQ Arachis hypogaea HOM05D007501 ORTHO05D009528 2.2e-22 110.2 167 40.1
VMungo1127G2061 Vigna mungo HOM05D007501 ORTHO05D009528 2.2e-22 110.2 181 37.0
Thhalv10021658m.g Eutrema salsugineum HOM05D007501 ORTHO05D009528 4.9e-22 109.0 173 37.6
Aa31LG8G1980 Aethionema arabicum HOM05D007501 ORTHO05D009528 8.4e-22 108.2 151 41.7
PGR083G0065 Punica granatum HOM05D007501 ORTHO05D009528 8.4e-22 108.2 162 42.6
Phvul.011G168000 Phaseolus vulgaris HOM05D007501 ORTHO05D009528 1.1e-21 107.8 181 39.8
TPR.G16483 Trifolium pratense HOM05D007501 ORTHO05D009528 7.1e-21 105.1 199 35.2
THA.LOC104822580 Tarenaya hassleriana HOM05D007501 ORTHO05D009528 1.2e-20 104.4 181 38.7
CARHR089710 Cardamine hirsuta HOM05D007501 ORTHO05D009528 1.6e-20 104.0 157 40.1
AT3G14760 Arabidopsis thaliana HOM05D007501 ORTHO05D009528 2.7e-20 103.2 173 35.8
Carub.0003s1443 Capsella rubella HOM05D007501 ORTHO05D009528 2.7e-20 103.2 176 35.8
C01p49690 Brassica napus HOM05D007501 ORTHO05D009528 6.0e-20 102.1 165 38.2
Aqoxy4G00171 Aquilegia oxysepala HOM05D007501 ORTHO05D009528 1.0e-19 101.3 156 37.2
Medtr8g042500 Medicago truncatula HOM05D007501 ORTHO05D009528 1.0e-19 101.3 104 49.0
AL3G27070 Arabidopsis lyrata HOM05D007501 ORTHO05D009528 1.3e-19 100.9 165 36.4
BolC1t04925H Brassica oleracea HOM05D007501 ORTHO05D009528 1.7e-19 100.5 169 37.3
Sp3g12990 Schrenkiella parvula HOM05D007501 ORTHO05D009528 3.0e-19 99.8 174 35.6
BraA01t03953Z Brassica rapa HOM05D007501 ORTHO05D009528 6.6e-19 98.6 169 37.3
A01p39060 Brassica napus HOM05D007501 ORTHO05D009528 1.5e-18 97.4 158 39.2
CANSAT56G4361 Cannabis sativa HOM05D007501 ORTHO05D009528 4.3e-18 95.9 119 46.2
CiPaw.12G110200 Carya illinoinensis HOM05D007501 ORTHO05D009528 4.3e-18 95.9 165 37.0
BcaC09g48445 Brassica carinata HOM05D007501 ORTHO05D009528 5.6e-18 95.5 158 37.3
Dinv26703 Davidia involucrata HOM05D007501 ORTHO05D009528 5.6e-18 95.5 129 38.0
Peaxi162Scf00111g00124 Petunia axillaris HOM05D007501 ORTHO05D009528 8.1e-17 91.7 151 35.1
Sopen07g030380 Solanum pennellii HOM05D007501 ORTHO05D009528 8.1e-17 91.7 157 36.9
SGA_v2.0_scaffold73G24380 Striga asiatica HOM05D007501 ORTHO05D009528 1.4e-16 90.9 159 35.2
AUR62013946 Chenopodium quinoa HOM05D007501 ORTHO05D009528 1.8e-16 90.5 158 33.5
Nitab4.5_0001140g0140 Nicotiana tabacum HOM05D007501 ORTHO05D009528 1.8e-16 90.5 152 36.8
Nitab4.5_0008460g0030 Nicotiana tabacum HOM05D007501 ORTHO05D009528 4.0e-16 89.4 152 35.5
Nitab4.5_0000383g0020 Nicotiana tabacum HOM05D007501 ORTHO05D009528 5.3e-16 89.0 136 36.8
arahy.Tifrunner.gnm1.ann1.652QPS Arachis hypogaea HOM05D007501 ORTHO05D009528 6.9e-16 88.6 166 36.1
MELO3C027342.2 Cucumis melo HOM05D007501 ORTHO05D009528 9.0e-16 88.2 152 36.8
Migut.M00689 Erythranthe guttata HOM05D007501 ORTHO05D009528 9.0e-16 88.2 157 37.6
PGSC0003DMG400043590 Solanum tuberosum HOM05D007501 ORTHO05D009528 1.2e-15 87.8 160 36.9
CAN.G375.54 Capsicum annuum HOM05D007501 ORTHO05D009528 9.9e-15 84.7 156 35.9
CsaV3_4G032800 Cucumis sativus L. HOM05D007501 ORTHO05D009528 9.9e-15 84.7 152 35.5
unitig_62.g23076 Utricularia gibba HOM05D006003 ORTHO05D007388 1.3e-14 84.3 150 38.0
SalBow8G3616 Salvia bowleyana HOM05D007501 ORTHO05D009528 1.1e-13 81.3 173 35.3
AUR62019665 Chenopodium quinoa HOM05D007501 ORTHO05D009528 3.2e-13 79.7 158 31.6
ClCG11G017140 Citrullus lanatus HOM05D007501 ORTHO05D009528 6.0e-12 75.5 152 34.9
Lalb_Chr03g0031351 Lupinus albus HOM05D007501 ORTHO05D009528 7.9e-12 75.1 164 34.1
EL10Ac4g08429 Beta vulgaris HOM05D007501 ORTHO05D009528 2.3e-11 73.6 90 42.2
ATR0681G022 Amborella trichopoda HOM05D007501 ORTHO05D009528 1.1e-10 71.2 71 50.7
Peaxi162Scf00069g01713 Petunia axillaris HOM05D007501 ORTHO05D009528 2.1e-09 67.0 82 42.7
SEGI_41065 Sequoiadendron giganteum HOM05D007501 ORTHO05D009528 2.8e-09 66.6 86 38.4
Zm00001eb314570 Zea mays HOM05D007501 ORTHO05D009528 8.1e-09 65.1 90 40.0
Sed0021060 Sechium edule HOM05D007501 ORTHO05D009528 2.4e-08 63.5 60 53.3
Os02g0321600 Oryza sativa ssp. japonica HOM05D007501 ORTHO05D009528 1.5e-07 60.8 49 53.1
Os02g0320600 Oryza sativa ssp. japonica HOM05D007501 ORTHO05D009528 2.6e-07 60.1 32 78.1
Zm00001eb055040 Zea mays HOM05D007501 ORTHO05D009528 3.4e-07 59.7 37 67.6
Zm00001eb100670 Zea mays HOM05D007501 ORTHO05D009528 3.4e-07 59.7 32 68.8
Thecc.08G162400 Theobroma cacao HOM05D007964 ORTHO05D010090 4.5e-07 59.3 57 42.1
COL.COLO4_29112 Corchorus olitorius HOM05D007964 ORTHO05D010090 7.6e-07 58.5 47 48.9
SEGI_33176 Sequoiadendron giganteum HOM05D002803 ORTHO05D003089 1.0e-06 58.2 51 49.0
Gohir.D06G116200 Gossypium hirsutum HOM05D007964 ORTHO05D010090 1.7e-06 57.4 53 49.1
Gorai.010G134000 Gossypium raimondii HOM05D007964 ORTHO05D010090 2.9e-06 56.6 53 49.1
Gohir.A06G112000 Gossypium hirsutum HOM05D007964 ORTHO05D010090 6.4e-06 55.5 37 59.5


User provided reference genes

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