Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc68.23 Carica papaya HOM05D026412 ORTHO05D010611 1.0e-57 226.5 111 100.0
Cpa.g.sc202.15 Carica papaya HOM05D005504 ORTHO05D002688 2.0e-13 79.3 95 48.4
CAN.G151.31 Capsicum annuum HOM05D008574 ORTHO05D010611 2.2e-12 75.9 145 32.4
CAN.G100.6 Capsicum annuum HOM05D008574 ORTHO05D010611 3.8e-12 75.1 131 34.4
CAN.G79.92 Capsicum annuum HOM05D008574 ORTHO05D010611 8.5e-12 73.9 155 31.6
Cpa.g.sc202.16 Carica papaya HOM05D026412 ORTHO05D000047 9.4e-11 70.5 39 89.7
CSS0048922 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 4.6e-10 68.2 106 34.9
CAN.G388.75 Capsicum annuum HOM05D008574 ORTHO05D010611 6.7e-09 64.3 116 35.3
Peaxi162Scf00002g00292 Petunia axillaris HOM05D008574 ORTHO05D010611 6.7e-09 64.3 111 34.2
Cpa.g.sc136.6 Carica papaya HOM05D026412 ORTHO05D000047 8.8e-09 63.9 40 82.5
ECA240G1440 Erigeron canadensis HOM05D000002 ORTHO05D000047 1.1e-08 63.5 78 44.9
arahy.Tifrunner.gnm1.ann1.AAD92C Arachis hypogaea HOM05D000034 ORTHO05D002688 1.5e-08 63.2 108 33.3
CSS0003405 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 1.5e-08 63.2 136 30.1
Cpa.g.sc57.44 Carica papaya HOM05D026412 ORTHO05D010611 1.5e-08 63.2 40 77.5
CSS0036183 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 1.9e-08 62.8 146 29.5
Hma1.2p1_1109F.1_g257970 Hydrangea macrophylla HOM05D005504 ORTHO05D002688 2.5e-08 62.4 76 40.8
Cpa.g.sc2.24 Carica papaya HOM05D034689 ORTHO05D002688 3.3e-08 62.0 30 86.7
arahy.Tifrunner.gnm1.ann1.GG48NL Arachis hypogaea HOM05D000034 ORTHO05D000037 4.3e-08 61.6 72 38.9
TPR.G35176 Trifolium pratense HOM05D005504 ORTHO05D002688 4.3e-08 61.6 143 30.1
HanXRQChr12g0355561 Helianthus annuus HOM05D005504 ORTHO05D002688 7.4e-08 60.8 96 36.5
Hma1.2p1_0076F.1_g039500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.4e-08 60.8 76 39.5
arahy.Tifrunner.gnm1.ann1.C19S8A Arachis hypogaea HOM05D000034 ORTHO05D000037 9.7e-08 60.5 72 37.5
CSS0018718 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 9.7e-08 60.5 146 29.5
Lj1g0004986 Lotus japonicus HOM05D000034 ORTHO05D002688 9.7e-08 60.5 72 38.9
Lj1g0008887 Lotus japonicus HOM05D000034 ORTHO05D002688 9.7e-08 60.5 72 38.9
TPR.G3960 Trifolium pratense HOM05D005504 ORTHO05D002688 9.7e-08 60.5 143 29.4
CSS0028977 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 1.3e-07 60.1 122 31.1
Peaxi162Scf00008g00018 Petunia axillaris HOM05D008574 ORTHO05D010611 1.3e-07 60.1 87 35.6
Hma1.2p1_0008F-2.1_g005830 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.7e-07 59.7 102 32.4
arahy.Tifrunner.gnm1.ann1.0J418G Arachis hypogaea HOM05D000034 ORTHO05D002688 2.2e-07 59.3 72 37.5
arahy.Tifrunner.gnm1.ann1.A110NB Arachis hypogaea HOM05D000034 ORTHO05D002688 2.2e-07 59.3 72 37.5
Lsat_1_v5_gn_3_28480 Lactuca sativa HOM05D005504 ORTHO05D002688 2.8e-07 58.9 55 50.9
DCAR_015793 Daucus carota HOM05D005504 ORTHO05D002688 4.8e-07 58.2 73 41.1
TPR.G21815 Trifolium pratense HOM05D003568 ORTHO05D004104 4.8e-07 58.2 60 46.7
TPR.G27983 Trifolium pratense HOM05D005504 ORTHO05D002688 4.8e-07 58.2 143 28.7
CSS0015461 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 6.3e-07 57.8 144 26.4
Phvul.008G112650 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 6.3e-07 57.8 108 32.4
arahy.Tifrunner.gnm1.ann1.C92MA9 Arachis hypogaea HOM05D000034 ORTHO05D002688 8.2e-07 57.4 55 45.5
arahy.Tifrunner.gnm1.ann1.UA7YVD Arachis hypogaea HOM05D000034 ORTHO05D002688 8.2e-07 57.4 55 43.6
Lsat_1_v5_gn_5_155201 Lactuca sativa HOM05D000665 ORTHO05D000140 8.2e-07 57.4 55 49.1
Phvul.001G168600 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 8.2e-07 57.4 56 48.2
arahy.Tifrunner.gnm1.ann1.7VN967 Arachis hypogaea HOM05D000034 ORTHO05D002688 1.1e-06 57.0 55 45.5
CAN.G348.6 Capsicum annuum HOM05D005504 ORTHO05D010611 1.1e-06 57.0 131 27.5
Glyma.02G129632 Glycine max HOM05D000034 ORTHO05D002688 1.1e-06 57.0 69 34.8
Glyma.07G272050 Glycine max HOM05D000034 ORTHO05D002688 1.1e-06 57.0 69 34.8
Glyma.10G052850 Glycine max HOM05D000034 ORTHO05D002688 1.1e-06 57.0 69 34.8
Glyma.15G163350 Glycine max HOM05D000034 ORTHO05D002688 1.1e-06 57.0 69 34.8
Ah.10g026380 Amaranthus hybridus HOM05D005504 ORTHO05D002688 1.4e-06 56.6 132 26.5
arahy.Tifrunner.gnm1.ann1.97STDM Arachis hypogaea HOM05D000034 ORTHO05D002688 1.4e-06 56.6 69 40.6
arahy.Tifrunner.gnm1.ann1.BVAS0V Arachis hypogaea HOM05D000034 ORTHO05D002688 1.4e-06 56.6 55 43.6
Atru.chr5.1596 Acer truncatum HOM05D005504 ORTHO05D002688 1.8e-06 56.2 145 28.3
ECA238G0287 Erigeron canadensis HOM05D005504 ORTHO05D002688 1.8e-06 56.2 55 49.1
ECA248G2768 Erigeron canadensis HOM05D005504 ORTHO05D002688 1.8e-06 56.2 61 44.3
Medtr8g062180 Medicago truncatula HOM05D014266 ORTHO05D018035 1.8e-06 56.2 141 25.5
Phvul.008G165300 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.8e-06 56.2 108 32.4
arahy.Tifrunner.gnm1.ann1.TXJ7KC Arachis hypogaea HOM05D000034 ORTHO05D002688 2.4e-06 55.8 55 45.5
Phvul.009G122000 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 2.4e-06 55.8 93 37.6
arahy.Tifrunner.gnm1.ann1.71FTPI Arachis hypogaea HOM05D000034 ORTHO05D002688 3.1e-06 55.5 69 39.1
arahy.Tifrunner.gnm1.ann1.7N13V0 Arachis hypogaea HOM05D000034 ORTHO05D002688 3.1e-06 55.5 69 39.1
arahy.Tifrunner.gnm1.ann1.G2X2VF Arachis hypogaea HOM05D000034 ORTHO05D002688 3.1e-06 55.5 69 39.1
Lj1g0022373 Lotus japonicus HOM05D000034 ORTHO05D002688 3.1e-06 55.5 49 49.0
Phvul.002G150300 Phaseolus vulgaris HOM05D005504 ORTHO05D000585 3.1e-06 55.5 55 47.3
Ah.01g010920 Amaranthus hybridus HOM05D005504 ORTHO05D002688 4.1e-06 55.1 132 25.8
CSS0050109 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000140 4.1e-06 55.1 126 27.8
Phvul.002G065100 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 4.1e-06 55.1 55 47.3
Phvul.011G148300 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 4.1e-06 55.1 55 47.3
arahy.Tifrunner.gnm1.ann1.AF0AHW Arachis hypogaea HOM05D000034 ORTHO05D000037 5.3e-06 54.7 101 30.7
arahy.Tifrunner.gnm1.ann1.ZA5JKI Arachis hypogaea HOM05D000034 ORTHO05D002688 5.3e-06 54.7 69 39.1
CSS0000995 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 5.3e-06 54.7 147 27.2
ECA232G3538 Erigeron canadensis HOM05D005504 ORTHO05D002688 5.3e-06 54.7 79 39.2
Phvul.010G071400 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 5.3e-06 54.7 55 47.3
arahy.Tifrunner.gnm1.ann1.HX5DKE Arachis hypogaea HOM05D000034 ORTHO05D002688 6.9e-06 54.3 55 43.6
EL10Ac6g13234 Beta vulgaris HOM05D000034 ORTHO05D002688 6.9e-06 54.3 98 35.7
Hma1.2p1_0187F.1_g082350 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.9e-06 54.3 123 27.6
Lalb_Chr18g0055031 Lupinus albus HOM05D000034 ORTHO05D002688 6.9e-06 54.3 55 40.0
Phvul.002G169500 Phaseolus vulgaris HOM05D005504 ORTHO05D000585 6.9e-06 54.3 55 47.3
Phvul.006G022100 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 6.9e-06 54.3 55 47.3
Atru.chr13.1509 Acer truncatum HOM05D005504 ORTHO05D002688 9.1e-06 53.9 145 27.6
EL10Ac7g17364 Beta vulgaris HOM05D005504 ORTHO05D002688 9.1e-06 53.9 94 37.2
CSS0017383 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 9.1e-06 53.9 103 32.0
Medtr7g047540 Medicago truncatula HOM05D000034 ORTHO05D002688 9.1e-06 53.9 102 30.4
Medtr7g451740 Medicago truncatula HOM05D000034 ORTHO05D002688 9.1e-06 53.9 102 30.4


User provided reference genes

Program Settings