Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc673.3 Carica papaya HOM05D000098 ORTHO05D008846 1.6e-38 162.2 76 100.0
Cpa.g.sc2016.1 Carica papaya HOM05D000098 ORTHO05D008846 6.0e-17 90.5 66 68.2
CSS0013771 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D008846 4.0e-13 77.8 66 54.5
Cfa000111 Carpinus fangiana HOM05D000098 ORTHO05D008846 4.0e-13 77.8 66 57.6
Rhsim13G0146700 Rhododendron simsii HOM05D000098 ORTHO05D008846 5.8e-12 73.9 66 51.5
Aqoxy1G04121 Aquilegia oxysepala HOM05D000098 ORTHO05D008846 7.6e-12 73.6 66 48.5
CSS0000118 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D008846 9.9e-12 73.2 66 53.0
Duzib235G1418 Durio zibethinus HOM05D000098 ORTHO05D008846 9.9e-12 73.2 66 51.5
CiPaw.10G077500 Carya illinoinensis HOM05D000098 ORTHO05D008846 1.3e-11 72.8 66 50.0
CiPaw.09G101900 Carya illinoinensis HOM05D000098 ORTHO05D008846 1.7e-11 72.4 66 48.5
Haze_06913 Corylus avellana HOM05D000098 ORTHO05D008846 1.7e-11 72.4 63 55.6
Actinidia39268 Actinidia chinensis HOM05D000098 ORTHO05D008846 2.2e-11 72.0 66 51.5
Duzib160G0122 Durio zibethinus HOM05D000098 ORTHO05D008846 2.2e-11 72.0 66 48.5
Sc17g0007700 Simmondsia chinensis HOM05D000098 ORTHO05D008846 2.2e-11 72.0 66 54.5
Actinidia26863 Actinidia chinensis HOM05D000098 ORTHO05D008846 3.8e-11 71.2 66 53.0
Glyma.15G114100 Glycine max HOM05D000098 ORTHO05D008846 3.8e-11 71.2 66 50.0
RhsimUnG0109000 Rhododendron simsii HOM05D000098 ORTHO05D008846 3.8e-11 71.2 63 52.4
TWI38G2044 Tripterygium wilfordii HOM05D000098 ORTHO05D008846 3.8e-11 71.2 66 53.0
CANSAT56G2497 Cannabis sativa HOM05D000098 ORTHO05D008846 8.4e-11 70.1 55 58.2
Dinv07397 Davidia involucrata HOM05D000098 ORTHO05D008846 1.1e-10 69.7 66 51.5
Lj6g0023972 Lotus japonicus HOM05D000098 ORTHO05D008846 1.1e-10 69.7 66 51.5
Ciclev10018260m.g Citrus clementina HOM05D000098 ORTHO05D008846 1.9e-10 68.9 64 51.6
Gohir.A05G174400 Gossypium hirsutum HOM05D000098 ORTHO05D008846 1.9e-10 68.9 66 51.5
Gohir.D05G177400 Gossypium hirsutum HOM05D000098 ORTHO05D008846 1.9e-10 68.9 66 51.5
Gorai.009G182800 Gossypium raimondii HOM05D000098 ORTHO05D008846 1.9e-10 68.9 66 51.5
QL05p069785 Quercus lobata HOM05D000098 ORTHO05D008846 1.9e-10 68.9 66 50.0
QL09p006307 Quercus lobata HOM05D000098 ORTHO05D008846 1.9e-10 68.9 66 50.0
Atru.chr1.2462 Acer truncatum HOM05D000098 ORTHO05D008846 2.4e-10 68.6 66 48.5
PGR004G0035 Punica granatum HOM05D000098 ORTHO05D008846 2.4e-10 68.6 63 50.8
Rhsim02G0103400 Rhododendron simsii HOM05D000098 ORTHO05D008846 2.4e-10 68.6 66 48.5
Gohir.D06G159500 Gossypium hirsutum HOM05D000098 ORTHO05D008846 3.2e-10 68.2 63 54.0
Ah.14g087670 Amaranthus hybridus HOM05D000098 ORTHO05D008846 4.1e-10 67.8 65 53.8
Gohir.A06G153100 Gossypium hirsutum HOM05D000098 ORTHO05D008846 5.4e-10 67.4 58 55.2
Manes.04G068400 Manihot esculenta HOM05D000098 ORTHO05D008846 5.4e-10 67.4 66 48.5
Thecc.06G232600 Theobroma cacao HOM05D000098 ORTHO05D008846 5.4e-10 67.4 66 48.5
Gorai.010G186200 Gossypium raimondii HOM05D000098 ORTHO05D008846 7.1e-10 67.0 63 52.4
Sed0020798 Sechium edule HOM05D000098 ORTHO05D008846 7.1e-10 67.0 66 50.0
MELO3C021681.2 Cucumis melo HOM05D000098 ORTHO05D008846 9.2e-10 66.6 66 47.0
COL.COLO4_31875 Corchorus olitorius HOM05D000098 ORTHO05D008846 1.2e-09 66.2 66 47.0
RhsimUnG0028200 Rhododendron simsii HOM05D000098 ORTHO05D008846 1.2e-09 66.2 66 48.5
RhsimUnG0227900 Rhododendron simsii HOM05D000098 ORTHO05D008846 1.2e-09 66.2 66 48.5
Ah.09g234280 Amaranthus hybridus HOM05D000098 ORTHO05D008846 1.6e-09 65.9 54 57.4
EL10Ac8g20175 Beta vulgaris HOM05D000098 ORTHO05D008846 1.6e-09 65.9 68 48.5
Nn1g07353 Nelumbo nucifera HOM05D000098 ORTHO05D008846 1.6e-09 65.9 66 47.0
Actinidia02316 Actinidia chinensis HOM05D000098 ORTHO05D008846 2.1e-09 65.5 66 48.5
Hma1.2p1_0298F.1_g117190 Hydrangea macrophylla HOM05D000098 ORTHO05D008846 2.1e-09 65.5 66 47.0
Medtr2g025580 Medicago truncatula HOM05D000098 ORTHO05D008846 2.1e-09 65.5 66 48.5
VMungo0540G2427 Vigna mungo HOM05D000098 ORTHO05D008846 2.1e-09 65.5 66 45.5
Phvul.006G143700 Phaseolus vulgaris HOM05D000098 ORTHO05D008846 3.5e-09 64.7 66 45.5
TPR.G13157 Trifolium pratense HOM05D000098 ORTHO05D008846 3.5e-09 64.7 66 47.0
Glyma.09G009800 Glycine max HOM05D000098 ORTHO05D008846 4.6e-09 64.3 66 43.9
MD05G1357200 Malus domestica HOM05D000098 ORTHO05D008846 4.6e-09 64.3 66 45.5
PSO541G1516 Papaver somniferum HOM05D000098 ORTHO05D008846 4.6e-09 64.3 65 46.2
DCAR_030873 Daucus carota HOM05D000098 ORTHO05D008846 6.0e-09 63.9 63 49.2
Nn1g03332 Nelumbo nucifera HOM05D000098 ORTHO05D008846 6.0e-09 63.9 63 49.2
Prupe.4G011400 Prunus persica HOM05D000098 ORTHO05D008846 6.0e-09 63.9 66 43.9
Manes.08G067700 Manihot esculenta HOM05D000098 ORTHO05D008846 1.0e-08 63.2 66 50.0
Solyc11g012130.2 Solanum lycopersicum HOM05D000098 ORTHO05D008846 1.0e-08 63.2 63 46.0
Sopen11g006920 Solanum pennellii HOM05D000098 ORTHO05D008846 1.0e-08 63.2 63 46.0
arahy.Tifrunner.gnm1.ann1.9W326J Arachis hypogaea HOM05D000098 ORTHO05D008846 1.3e-08 62.8 65 46.2
arahy.Tifrunner.gnm1.ann1.QMCC06 Arachis hypogaea HOM05D000098 ORTHO05D008846 1.3e-08 62.8 65 46.2
AUR62021870 Chenopodium quinoa HOM05D000098 ORTHO05D008846 1.3e-08 62.8 68 48.5
ClCG01G010260 Citrullus lanatus HOM05D000098 ORTHO05D008846 1.7e-08 62.4 66 45.5
Peaxi162Scf00558g00413 Petunia axillaris HOM05D000098 ORTHO05D008846 1.7e-08 62.4 63 44.4
GSVIVG01003354001 Vitis vinifera HOM05D000098 ORTHO05D008846 1.7e-08 62.4 66 40.9
CsaV3_1G017220 Cucumis sativus L. HOM05D000098 ORTHO05D008846 2.3e-08 62.0 66 45.5
FvH4_3g01050 Fragaria vesca HOM05D000098 ORTHO05D008846 2.3e-08 62.0 66 42.4
TAR627G0106 Trochodendron aralioides HOM05D000098 ORTHO05D008846 2.3e-08 62.0 66 43.9
Ca_00717_v3 Cicer arietinum L. HOM05D000098 ORTHO05D008846 3.0e-08 61.6 66 43.9
Sabra06G0006800 Salix brachista HOM05D000098 ORTHO05D008846 3.0e-08 61.6 66 48.5
Hund23410 Selenicereus undatus HOM05D000098 ORTHO05D008846 3.0e-08 61.6 51 56.9
CAN.G1186.24 Capsicum annuum HOM05D000098 ORTHO05D008846 5.1e-08 60.8 63 44.4
TAR626G0619 Trochodendron aralioides HOM05D000098 ORTHO05D008846 5.1e-08 60.8 63 47.6
FAN21G1460 Fragaria x ananassa HOM05D000098 ORTHO05D008846 6.6e-08 60.5 66 40.9
Psat1g176160 Pisum sativum HOM05D000098 ORTHO05D008846 6.6e-08 60.5 66 40.9
Dinv13964 Davidia involucrata HOM05D000098 ORTHO05D008846 8.7e-08 60.1 66 43.9
FAN25G3353 Fragaria x ananassa HOM05D000098 ORTHO05D008846 8.7e-08 60.1 66 40.9
Oeu044419.1 Olea europaea HOM05D000098 ORTHO05D008846 8.7e-08 60.1 66 45.5
Nitab4.5_0000143g0360 Nicotiana tabacum HOM05D000098 ORTHO05D008846 1.1e-07 59.7 63 44.4
Potri.006G009000 Populus trichocarpa HOM05D000098 ORTHO05D008846 1.1e-07 59.7 66 47.0
SGA_v2.0_scaffold4G01879 Striga asiatica HOM05D000098 ORTHO05D008846 1.1e-07 59.7 61 47.5
Eucgr.D01394 Eucalyptus grandis HOM05D000098 ORTHO05D008846 1.5e-07 59.3 66 42.4
Nitab4.5_0001198g0110 Nicotiana tabacum HOM05D000098 ORTHO05D008846 1.5e-07 59.3 63 44.4
Sabra16G0017200 Salix brachista HOM05D000098 ORTHO05D008846 1.5e-07 59.3 67 43.3
Oeu002759.1 Olea europaea HOM05D000098 ORTHO05D008846 3.3e-07 58.2 66 42.4
TAR629G0726 Trochodendron aralioides HOM05D000098 ORTHO05D008846 3.3e-07 58.2 66 39.4
Potri.016G015200 Populus trichocarpa HOM05D000098 ORTHO05D008846 7.3e-07 57.0 66 42.4
Oeu003177.1 Olea europaea HOM05D000098 ORTHO05D008846 1.2e-06 56.2 65 43.1
TAR624G0912 Trochodendron aralioides HOM05D000098 ORTHO05D008846 1.2e-06 56.2 63 46.0
SEGI_12836 Sequoiadendron giganteum HOM05D000098 ORTHO05D008846 3.6e-06 54.7 65 33.8
SEGI_24650 Sequoiadendron giganteum HOM05D000098 ORTHO05D008846 3.6e-06 54.7 67 35.8
SEGI_40157 Sequoiadendron giganteum HOM05D000098 ORTHO05D008846 3.6e-06 54.7 67 35.8
unitig_32.g11046 Utricularia gibba HOM05D000098 ORTHO05D008846 3.6e-06 54.7 63 44.4
SEGI_03090 Sequoiadendron giganteum HOM05D000098 ORTHO05D008846 6.2e-06 53.9 65 33.8


User provided reference genes

Program Settings