Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc67.56 Carica papaya HOM05D005437 ORTHO05D006699 1.9e-175 619.0 305 100.0
Thecc.07G149800 Theobroma cacao HOM05D005437 ORTHO05D006699 4.3e-114 415.2 266 74.8
Duzib268G1426 Durio zibethinus HOM05D005437 ORTHO05D006699 8.0e-113 411.0 296 68.6
Ciclev10004324m.g Citrus clementina HOM05D005437 ORTHO05D006699 6.8e-112 407.9 266 73.7
COL.COLO4_36739 Corchorus olitorius HOM05D005437 ORTHO05D006699 1.5e-111 406.8 266 73.7
Gorai.002G036800 Gossypium raimondii HOM05D005437 ORTHO05D006699 7.5e-111 404.4 266 72.9
Gohir.D01G027500 Gossypium hirsutum HOM05D005437 ORTHO05D006699 9.8e-111 404.1 265 73.2
Gohir.A01G039700 Gossypium hirsutum HOM05D005437 ORTHO05D006699 6.4e-110 401.4 266 72.6
Sabra07G0053300 Salix brachista HOM05D005437 ORTHO05D006699 1.1e-109 400.6 266 73.3
Dinv19612 Davidia involucrata HOM05D005437 ORTHO05D006699 5.4e-109 398.3 265 74.3
Actinidia12783 Actinidia chinensis HOM05D005437 ORTHO05D006699 2.0e-108 396.4 268 72.8
Potri.007G066400 Populus trichocarpa HOM05D005437 ORTHO05D006699 5.0e-107 391.7 266 71.4
A06p12540 Brassica napus HOM05D005437 ORTHO05D006699 1.9e-106 389.8 266 71.1
BraA06t24417Z Brassica rapa HOM05D005437 ORTHO05D006699 1.9e-106 389.8 266 71.1
CSS0042223 Camellia sinensis var. sinensis HOM05D005437 ORTHO05D006699 4.3e-106 388.7 265 71.7
BcaC05g25518 Brassica carinata HOM05D005437 ORTHO05D006699 1.6e-105 386.7 266 70.3
THA.LOC104812356 Tarenaya hassleriana HOM05D005437 ORTHO05D006699 2.1e-105 386.3 266 71.1
Manes.06G173000 Manihot esculenta HOM05D005437 ORTHO05D006699 2.8e-105 386.0 266 71.4
C05p14850 Brassica napus HOM05D005437 ORTHO05D006699 3.6e-105 385.6 266 69.9
BolC5t30200H Brassica oleracea HOM05D005437 ORTHO05D006699 3.6e-105 385.6 266 69.9
Thhalv10006808m.g Eutrema salsugineum HOM05D005437 ORTHO05D006699 3.1e-104 382.5 266 69.2
Sp1g14710 Schrenkiella parvula HOM05D005437 ORTHO05D006699 4.0e-104 382.1 266 69.2
TWI39G0192 Tripterygium wilfordii HOM05D005437 ORTHO05D006699 4.0e-104 382.1 266 68.8
AT1G16540 Arabidopsis thaliana HOM05D005437 ORTHO05D006699 5.2e-104 381.7 266 70.3
GSVIVG01020355001 Vitis vinifera HOM05D005437 ORTHO05D006699 6.8e-104 381.3 265 71.3
AL1G28710 Arabidopsis lyrata HOM05D005437 ORTHO05D006699 8.9e-104 380.9 266 70.3
Aa31LG7G1090 Aethionema arabicum HOM05D005437 ORTHO05D006699 2.6e-103 379.4 266 69.2
MD05G1221200 Malus domestica HOM05D005437 ORTHO05D006699 2.6e-103 379.4 266 71.1
Rhsim06G0239800 Rhododendron simsii HOM05D005437 ORTHO05D006699 2.6e-103 379.4 265 69.4
Carub.0001s1630 Capsella rubella HOM05D005437 ORTHO05D006699 5.8e-103 378.3 266 69.5
MELO3C019659.2 Cucumis melo HOM05D005437 ORTHO05D006699 9.8e-103 377.5 266 67.7
Glyma.09G002300 Glycine max HOM05D005437 ORTHO05D006699 2.2e-102 376.3 266 67.7
FvH4_3g15600 Fragaria vesca HOM05D005437 ORTHO05D006699 3.7e-102 375.6 269 68.8
FAN11G3430 Fragaria x ananassa HOM05D005437 ORTHO05D006699 3.7e-102 375.6 269 68.8
Ca_19805_v3 Cicer arietinum L. HOM05D005437 ORTHO05D006699 4.9e-102 375.2 266 68.0
Lj3g0019331 Lotus japonicus HOM05D005437 ORTHO05D006699 6.4e-102 374.8 266 68.0
TPR.G34170 Trifolium pratense HOM05D005437 ORTHO05D006699 6.4e-102 374.8 266 68.0
FAN16G0636 Fragaria x ananassa HOM05D005437 ORTHO05D006699 8.3e-102 374.4 269 69.1
CsaV3_6G013680 Cucumis sativus L. HOM05D005437 ORTHO05D006699 1.1e-101 374.0 267 67.4
CANSAT80G2640 Cannabis sativa HOM05D005437 ORTHO05D006699 1.4e-101 373.6 266 69.2
Phvul.011G216100 Phaseolus vulgaris HOM05D005437 ORTHO05D006699 1.9e-101 373.2 266 68.4
Prupe.4G138400 Prunus persica HOM05D005437 ORTHO05D006699 1.9e-101 373.2 266 69.9
VMungo1127G0204 Vigna mungo HOM05D005437 ORTHO05D006699 1.9e-101 373.2 266 68.0
Psat7g228480 Pisum sativum HOM05D005437 ORTHO05D006699 2.4e-101 372.9 266 67.7
RcHm_v2.0_Chr5g0026221 Rosa chinensis HOM05D005437 ORTHO05D006699 2.4e-101 372.9 269 69.5
Lalb_Chr01g0008201 Lupinus albus HOM05D005437 ORTHO05D006699 4.6e-100 368.6 266 66.5
CiPaw.11G065200 Carya illinoinensis HOM05D005437 ORTHO05D006699 6.0e-100 368.2 266 68.0
Solyc07g066480.3 Solanum lycopersicum HOM05D005437 ORTHO05D006699 7.8e-100 367.9 266 67.7
Sed0015468 Sechium edule HOM05D005437 ORTHO05D006699 1.7e-99 366.7 266 67.3
Aqoxy1G01551_Aqoxy1G01552 Aquilegia oxysepala HOM05D005437 ORTHO05D006699 3.0e-99 365.9 268 66.8
PGSC0003DMG400022125 Solanum tuberosum HOM05D005437 ORTHO05D006699 3.0e-99 365.9 266 66.9
Sopen07g034660 Solanum pennellii HOM05D005437 ORTHO05D006699 3.9e-99 365.5 266 67.3
FAN21G1213 Fragaria x ananassa HOM05D005437 ORTHO05D006699 3.3e-98 362.5 270 67.4
Medtr4g030930 Medicago truncatula HOM05D005437 ORTHO05D006699 1.2e-97 360.5 266 65.8
Migut.M01548 Erythranthe guttata HOM05D005437 ORTHO05D006699 2.1e-97 359.8 265 67.5
ECA236G0150 Erigeron canadensis HOM05D005437 ORTHO05D006699 2.8e-97 359.4 266 66.5
ATR0763G170 Amborella trichopoda HOM05D005437 ORTHO05D006699 4.7e-97 358.6 265 69.1
Oeu036617.1 Olea europaea HOM05D005437 ORTHO05D006699 4.7e-97 358.6 265 66.8
CAN.G943.42 Capsicum annuum HOM05D005437 ORTHO05D006699 6.2e-97 358.2 266 66.2
Sc20g0003070 Simmondsia chinensis HOM05D005437 ORTHO05D006699 1.1e-96 357.5 265 64.9
EL10Ac9g21866 Beta vulgaris HOM05D005437 ORTHO05D006699 5.2e-96 355.1 265 66.0
Lsat_1_v5_gn_7_111601 Lactuca sativa HOM05D005437 ORTHO05D006699 6.8e-96 354.8 265 66.8
AUR62016581 Chenopodium quinoa HOM05D005437 ORTHO05D006699 1.2e-95 354.0 266 65.0
PSO675G2460 Papaver somniferum HOM05D005437 ORTHO05D006699 1.5e-95 353.6 266 65.4
Cc05_g16200 Coffea canephora HOM05D005437 ORTHO05D006699 2.6e-95 352.8 264 66.3
HanXRQChr11g0335011 Helianthus annuus HOM05D005437 ORTHO05D006699 2.6e-95 352.8 265 67.5
AUR62011473 Chenopodium quinoa HOM05D005437 ORTHO05D006699 7.5e-95 351.3 265 64.5
Peaxi162Scf00452g00721 Petunia axillaris HOM05D005437 ORTHO05D006699 2.2e-94 349.7 266 63.9
Eucgr.F01464 Eucalyptus grandis HOM05D005437 ORTHO05D006699 3.7e-94 349.0 267 66.3
Nitab4.5_0002321g0070 Nicotiana tabacum HOM05D005437 ORTHO05D006699 2.4e-93 346.3 293 60.8
PGR102G1747 Punica granatum HOM05D005437 ORTHO05D006699 4.1e-93 345.5 268 64.9
DCAR_009644 Daucus carota HOM05D005437 ORTHO05D006699 9.2e-93 344.4 292 62.0
QL04p076801 Quercus lobata HOM05D005437 ORTHO05D006699 2.7e-92 342.8 226 73.5
Zm00001eb389990 Zea mays HOM05D005437 ORTHO05D006699 1.7e-91 340.1 265 62.3
arahy.Tifrunner.gnm1.ann1.K3W397 Arachis hypogaea HOM05D005437 ORTHO05D006699 2.3e-91 339.7 215 75.3
TAR626G0611 Trochodendron aralioides HOM05D005437 ORTHO05D006699 2.3e-91 339.7 231 71.4
arahy.Tifrunner.gnm1.ann1.49XUJ3 Arachis hypogaea HOM05D005437 ORTHO05D006699 8.6e-91 337.8 215 74.9
Os06g0670000 Oryza sativa ssp. japonica HOM05D005437 ORTHO05D006699 7.3e-90 334.7 265 61.5
HPP92_026356 Vanilla planifolia HOM05D005437 ORTHO05D006699 1.6e-89 333.6 265 61.1
Duzib213G0844 Durio zibethinus HOM05D005437 ORTHO05D006699 6.2e-89 331.6 266 63.5
SalBow8G5394 Salvia bowleyana HOM05D005437 ORTHO05D006699 8.9e-88 327.8 253 65.6
FAN25G2633 Fragaria x ananassa HOM05D005437 ORTHO05D006699 5.8e-87 325.1 234 69.2
Hma1.2p1_0637F.1_g193450 Hydrangea macrophylla HOM05D005437 ORTHO05D006699 1.1e-85 320.9 196 80.1
SEGI_23870 Sequoiadendron giganteum HOM05D005437 ORTHO05D006699 3.9e-83 312.4 270 56.7
Zm00001eb274240 Zea mays HOM05D005437 ORTHO05D006699 4.9e-78 295.4 290 52.8
Mapoly0055s0057 Marchantia polymorpha HOM05D005437 ORTHO05D006699 1.9e-77 293.5 276 53.6
SMO144G0105 Selaginella moellendorffii HOM05D005437 ORTHO05D006699 5.4e-77 292.0 269 52.4
AagrBONN_evm.TU.Sc2ySwM_344.1621 Anthoceros agrestis HOM05D005437 ORTHO05D006699 8.7e-75 284.6 281 50.5
Pp3c5_23340 Physcomitrium patens HOM05D005437 ORTHO05D006699 1.6e-73 280.4 295 49.5
SGA_v2.0_scaffold186G40210 Striga asiatica HOM05D005437 ORTHO05D006699 1.6e-73 280.4 256 59.4
vmacro11674 Vaccinium macrocarpon HOM05D005437 ORTHO05D006699 5.8e-71 271.9 453 38.9
Lj8A189G28 Lonicera japonica HOM05D005437 ORTHO05D006699 8.4e-70 268.1 188 68.1
Hma1.2p1_0637F.1_g193460 Hydrangea macrophylla HOM05D005437 ORTHO05D006699 2.1e-68 263.5 165 76.4
CBR_g6363 Chara braunii HOM05D005437 ORTHO05D006699 2.4e-64 250.0 320 43.1
Atru.chr1.169 Acer truncatum HOM05D005437 ORTHO05D006699 1.4e-48 197.6 128 77.3
Nitab4.5_0001080g0010 Nicotiana tabacum HOM05D005437 ORTHO05D006699 1.8e-48 197.2 115 73.9
CDE02G3212 Ceratophyllum demersum HOM05D005437 ORTHO05D006699 6.9e-48 195.3 265 44.9
unitig_748.g7633 Utricularia gibba HOM05D005437 ORTHO05D006699 2.8e-41 173.3 253 41.5
Nn7g37999 Nelumbo nucifera HOM05D005437 ORTHO05D006699 1.8e-35 154.1 120 57.5
Cfa026809 Carpinus fangiana HOM05D005437 ORTHO05D006699 8.8e-35 151.8 266 33.8
SHI21422 Sapria himalayana HOM05D005437 ORTHO05D006699 5.0e-30 136.0 108 63.9
SHI21431 Sapria himalayana HOM05D005437 ORTHO05D002750 5.0e-30 136.0 103 59.2
Haze_08574 Corylus avellana HOM05D005437 ORTHO05D006699 1.9e-29 134.0 85 70.6
Cre03.g152000 Chlamydomonas reinhardtii HOM05D005437 ORTHO05D006699 2.2e-25 120.6 196 34.7
Cre02.g142351 Chlamydomonas reinhardtii HOM05D005437 ORTHO05D006699 9.1e-24 115.2 238 29.0
SEGI_28347 Sequoiadendron giganteum HOM05D005437 ORTHO05D006699 1.0e-22 111.7 86 54.7
Atru.chr1.178 Acer truncatum HOM05D005437 ORTHO05D006699 1.3e-22 111.3 75 74.7
MCO10G344 Micromonas commoda HOM05D005437 ORTHO05D006699 9.4e-21 105.1 358 26.5
PRCOL_00000624 Prasinoderma coloniale HOM05D005437 ORTHO05D006699 2.7e-20 103.6 243 31.3
Nn7g37998 Nelumbo nucifera HOM05D005437 ORTHO05D006699 1.4e-19 101.3 66 77.3
AL6G51080 Arabidopsis lyrata HOM05D005437 ORTHO05D006699 6.7e-19 99.0 64 76.6
arahy.Tifrunner.gnm1.ann1.HTN212 Arachis hypogaea HOM05D000563 ORTHO05D006699 3.8e-14 83.2 59 66.1
SalBow8G2468 Salvia bowleyana HOM05D005437 ORTHO05D006699 1.9e-13 80.9 53 71.7
SalBow7G4855 Salvia bowleyana HOM05D003004 ORTHO05D031533 3.2e-13 80.1 59 67.8
SalBow1G2829 Salvia bowleyana HOM05D005437 ORTHO05D006699 5.5e-13 79.3 53 69.8
SalBow2G0599 Salvia bowleyana HOM05D005437 ORTHO05D006699 5.5e-13 79.3 53 69.8
arahy.Tifrunner.gnm1.ann1.QVJL9E Arachis hypogaea HOM05D005437 ORTHO05D006699 8.8e-11 72.0 62 54.8
arahy.Tifrunner.gnm1.ann1.YWNN2V Arachis hypogaea HOM05D005437 ORTHO05D006699 4.4e-10 69.7 36 75.0
MBI16_g23763_MAGBIO Magnolia biondii HOM05D001123 ORTHO05D000966 2.4e-08 63.9 182 29.1
Pp3c15_23580 Physcomitrium patens HOM05D001123 ORTHO05D000966 3.5e-07 60.1 173 30.6


User provided reference genes

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