Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc66.66 Carica papaya HOM05D001824 ORTHO05D003650 2.9e-79 298.5 150 100.0
Ciclev10001139m.g Citrus clementina HOM05D001824 ORTHO05D003650 6.7e-28 127.9 164 45.7
Manes.02G190500 Manihot esculenta HOM05D001824 ORTHO05D003650 4.8e-26 121.7 142 50.7
Prupe.8G053500 Prunus persica HOM05D001824 ORTHO05D003650 3.1e-25 119.0 169 44.4
Duzib116G0086 Durio zibethinus HOM05D001824 ORTHO05D003650 6.9e-25 117.9 181 42.0
Thecc.08G201600 Theobroma cacao HOM05D001824 ORTHO05D003650 6.9e-25 117.9 218 39.0
QL02p034137 Quercus lobata HOM05D001824 ORTHO05D003650 2.6e-24 115.9 172 44.8
Atru.chr13.1842 Acer truncatum HOM05D001824 ORTHO05D003650 5.8e-24 114.8 179 42.5
GSVIVG01034879001 Vitis vinifera HOM05D001824 ORTHO05D003650 1.7e-23 113.2 130 50.8
CiPaw.15G082900 Carya illinoinensis HOM05D001824 ORTHO05D003650 2.2e-23 112.8 168 47.0
TAR381G1280 Trochodendron aralioides HOM05D001824 ORTHO05D003650 2.9e-23 112.5 181 41.4
Gorai.005G075200 Gossypium raimondii HOM05D001824 ORTHO05D003650 1.4e-22 110.2 174 40.8
Gohir.D02G066300 Gossypium hirsutum HOM05D001824 ORTHO05D003650 9.3e-22 107.5 168 41.7
COL.COLO4_35563 Corchorus olitorius HOM05D001824 ORTHO05D003650 2.7e-21 105.9 192 39.1
RcHm_v2.0_Chr6g0272221 Rosa chinensis HOM05D001824 ORTHO05D003650 3.5e-21 105.5 157 43.9
MBI16_g07679_MAGBIO Magnolia biondii HOM05D001824 ORTHO05D003650 6.0e-21 104.8 193 36.3
MD05G1040100 Malus domestica HOM05D001824 ORTHO05D003650 6.0e-21 104.8 166 39.8
TPR.G1771 Trifolium pratense HOM05D001824 ORTHO05D003650 7.9e-21 104.4 190 39.5
FAN24G1226 Fragaria x ananassa HOM05D001824 ORTHO05D003650 1.0e-20 104.0 166 41.6
Gohir.A02G060800 Gossypium hirsutum HOM05D001824 ORTHO05D003650 1.8e-20 103.2 174 39.1
Dinv19401 Davidia involucrata HOM05D001824 ORTHO05D003650 3.0e-20 102.4 165 40.0
FvH4_2g12290 Fragaria vesca HOM05D001824 ORTHO05D003650 3.0e-20 102.4 166 41.0
FAN20G0002 Fragaria x ananassa HOM05D001824 ORTHO05D003650 3.0e-20 102.4 166 41.0
CANSAT35G1733 Cannabis sativa HOM05D001824 ORTHO05D003650 5.1e-20 101.7 177 42.4
Sc01g0001690 Simmondsia chinensis HOM05D001824 ORTHO05D003650 1.1e-19 100.5 151 38.4
CSS0006144 Camellia sinensis var. sinensis HOM05D001824 ORTHO05D003650 1.5e-19 100.1 173 39.9
Psat6g186520 Pisum sativum HOM05D001824 ORTHO05D003650 1.9e-19 99.8 165 41.8
PGR042G1800 Punica granatum HOM05D001824 ORTHO05D003650 2.5e-19 99.4 160 40.6
CSS0044013 Camellia sinensis var. sinensis HOM05D001824 ORTHO05D003650 3.3e-19 99.0 161 37.3
TWI60G0971 Tripterygium wilfordii HOM05D001824 ORTHO05D003650 3.3e-19 99.0 162 39.5
A09p32130 Brassica napus HOM05D001824 ORTHO05D003650 4.3e-19 98.6 124 46.0
CDE02G0718 Ceratophyllum demersum HOM05D001824 ORTHO05D003650 4.3e-19 98.6 166 38.6
BraA09t38757Z Brassica rapa HOM05D001824 ORTHO05D003650 7.4e-19 97.8 124 46.0
Zm00001eb146430 Zea mays HOM05D001824 ORTHO05D003650 7.4e-19 97.8 182 38.5
Eucgr.F02631 Eucalyptus grandis HOM05D001824 ORTHO05D003650 1.3e-18 97.1 166 39.8
FAN27G0784 Fragaria x ananassa HOM05D001824 ORTHO05D003650 1.3e-18 97.1 166 39.8
Lj5g0019829 Lotus japonicus HOM05D001824 ORTHO05D003650 1.3e-18 97.1 166 39.8
Medtr1g096200 Medicago truncatula HOM05D001824 ORTHO05D003650 2.2e-18 96.3 190 37.4
Hund27076 Selenicereus undatus HOM05D001824 ORTHO05D003650 2.8e-18 95.9 173 38.2
SGA_v2.0_scaffold8G04436 Striga asiatica HOM05D001824 ORTHO05D003650 2.8e-18 95.9 147 39.5
Carub.0001s3247 Capsella rubella HOM05D001824 ORTHO05D003650 3.7e-18 95.5 124 47.6
Glyma.20G176900 Glycine max HOM05D001824 ORTHO05D003650 3.7e-18 95.5 168 40.5
COL.COLO4_17736 Corchorus olitorius HOM05D001824 ORTHO05D003650 4.8e-18 95.1 169 39.1
VMungo0720G0126 Vigna mungo HOM05D001824 ORTHO05D003650 4.8e-18 95.1 186 35.5
arahy.Tifrunner.gnm1.ann1.Y5PHEB Arachis hypogaea HOM05D001824 ORTHO05D003650 6.3e-18 94.7 171 38.6
MD10G1046100 Malus domestica HOM05D001824 ORTHO05D003650 6.3e-18 94.7 166 38.6
Nn5g27813 Nelumbo nucifera HOM05D001824 ORTHO05D003650 6.3e-18 94.7 188 35.6
GSVIVG01023264001 Vitis vinifera HOM05D001824 ORTHO05D003650 6.3e-18 94.7 144 38.2
Sp1g29550 Schrenkiella parvula HOM05D001824 ORTHO05D003650 8.2e-18 94.4 142 43.0
AL1G48890 Arabidopsis lyrata HOM05D001824 ORTHO05D003650 1.8e-17 93.2 129 46.5
AT1G34340 Arabidopsis thaliana HOM05D001824 ORTHO05D003650 1.8e-17 93.2 122 47.5
EL10Ac1g00065 Beta vulgaris HOM05D001824 ORTHO05D003650 1.8e-17 93.2 175 36.0
C06p11660 Brassica napus HOM05D001824 ORTHO05D003650 1.8e-17 93.2 127 44.9
CSS0009746 Camellia sinensis var. sinensis HOM05D001824 ORTHO05D003650 1.8e-17 93.2 150 40.0
Glyma.10G214900 Glycine max HOM05D001824 ORTHO05D003650 1.8e-17 93.2 166 37.3
Hma1.2p1_0004F.1_g004090 Hydrangea macrophylla HOM05D001824 ORTHO05D003650 1.8e-17 93.2 149 41.6
BcaC08g43784 Brassica carinata HOM05D001824 ORTHO05D003650 2.4e-17 92.8 124 43.5
BolC6t36296H Brassica oleracea HOM05D001824 ORTHO05D003650 2.4e-17 92.8 124 43.5
Haze_17902 Corylus avellana HOM05D001824 ORTHO05D003650 2.4e-17 92.8 170 40.6
arahy.Tifrunner.gnm1.ann1.9S5M62 Arachis hypogaea HOM05D001824 ORTHO05D003650 3.1e-17 92.4 171 38.0
Sabra13G0097300 Salix brachista HOM05D001824 ORTHO05D003650 4.1e-17 92.0 187 35.8
Lalb_Chr02g0141871 Lupinus albus HOM05D001824 ORTHO05D003650 5.3e-17 91.7 189 36.0
Actinidia23327 Actinidia chinensis HOM05D001824 ORTHO05D003650 6.9e-17 91.3 169 37.9
BcaB07g33133 Brassica carinata HOM05D001824 ORTHO05D003650 6.9e-17 91.3 124 42.7
Rhsim06G0097900 Rhododendron simsii HOM05D001824 ORTHO05D003650 6.9e-17 91.3 177 37.9
Lalb_Chr21g0305841 Lupinus albus HOM05D001824 ORTHO05D003650 9.0e-17 90.9 185 35.7
PSO017G6536 Papaver somniferum HOM05D001824 ORTHO05D003650 9.0e-17 90.9 169 33.7
THA.LOC104816259 Tarenaya hassleriana HOM05D001824 ORTHO05D003650 9.0e-17 90.9 133 45.9
Rhsim11G0124200 Rhododendron simsii HOM05D001824 ORTHO05D003650 1.2e-16 90.5 182 36.8
Thhalv10007321m.g Eutrema salsugineum HOM05D001824 ORTHO05D003650 2.6e-16 89.4 139 41.7
Peaxi162Scf00076g00117 Petunia axillaris HOM05D001824 ORTHO05D003650 2.6e-16 89.4 167 37.1
Lj5C262T14 Lonicera japonica HOM05D001824 ORTHO05D003650 3.4e-16 89.0 156 33.3
PSO170G0387 Papaver somniferum HOM05D001824 ORTHO05D003650 3.4e-16 89.0 169 33.1
CARHR033790 Cardamine hirsuta HOM05D001824 ORTHO05D003650 4.5e-16 88.6 124 41.9
Migut.C01233 Erythranthe guttata HOM05D001824 ORTHO05D003650 4.5e-16 88.6 145 38.6
Oeu000556.1 Olea europaea HOM05D001824 ORTHO05D003650 4.5e-16 88.6 158 36.1
vmacro12500 Vaccinium macrocarpon HOM05D001824 ORTHO05D003650 5.9e-16 88.2 189 32.8
Os01g0871100 Oryza sativa ssp. japonica HOM05D001824 ORTHO05D003650 7.6e-16 87.8 175 36.0
Sp6g11600 Schrenkiella parvula HOM05D001824 ORTHO05D003650 7.6e-16 87.8 158 34.2
Peaxi162Scf00011g00097 Petunia axillaris HOM05D001824 ORTHO05D003650 1.0e-15 87.4 165 34.5
ATR0584G075 Amborella trichopoda HOM05D001824 ORTHO05D003650 1.3e-15 87.0 174 35.1
CAN.G798.56 Capsicum annuum HOM05D001824 ORTHO05D003650 1.7e-15 86.7 157 36.3
vmacro01721 Vaccinium macrocarpon HOM05D001824 ORTHO05D003650 2.2e-15 86.3 179 36.3
vmacro01722 Vaccinium macrocarpon HOM05D001824 ORTHO05D003650 2.9e-15 85.9 179 35.2
Ah.05g177800 Amaranthus hybridus HOM05D001824 ORTHO05D003650 5.0e-15 85.1 171 35.1
Actinidia39009 Actinidia chinensis HOM05D001824 ORTHO05D003650 6.5e-15 84.7 183 33.9
Manes.10G119300 Manihot esculenta HOM05D001824 ORTHO05D003650 8.5e-15 84.3 165 35.2
Nitab4.5_0002596g0110 Nicotiana tabacum HOM05D001824 ORTHO05D003650 1.1e-14 84.0 180 32.2
Aa31LG6G8410 Aethionema arabicum HOM05D001824 ORTHO05D003650 1.4e-14 83.6 136 41.9
AUR62004664 Chenopodium quinoa HOM05D001824 ORTHO05D003650 1.9e-14 83.2 177 32.8
Migut.N00827 Erythranthe guttata HOM05D001824 ORTHO05D003650 1.9e-14 83.2 157 33.8
Ciclev10001852m.g Citrus clementina HOM05D001824 ORTHO05D003650 2.5e-14 82.8 182 35.2
THA.LOC104816249 Tarenaya hassleriana HOM05D001824 ORTHO05D003650 2.5e-14 82.8 125 42.4
AL8G23910 Arabidopsis lyrata HOM05D001824 ORTHO05D003650 3.2e-14 82.4 138 35.5
Thecc.02G019900 Theobroma cacao HOM05D001824 ORTHO05D003650 3.2e-14 82.4 184 33.7
AT5G49950 Arabidopsis thaliana HOM05D001824 ORTHO05D003650 4.2e-14 82.0 136 36.0
Aqoxy5G02576 Aquilegia oxysepala HOM05D001824 ORTHO05D003650 5.5e-14 81.6 185 31.9
BolC8t47867H Brassica oleracea HOM05D001824 ORTHO05D003650 5.5e-14 81.6 137 38.7
Nitab4.5_0000948g0010 Nicotiana tabacum HOM05D001824 ORTHO05D003650 5.5e-14 81.6 169 32.0
Thhalv10013194m.g Eutrema salsugineum HOM05D001824 ORTHO05D003650 7.2e-14 81.3 158 33.5
Gohir.A01G183000 Gossypium hirsutum HOM05D001824 ORTHO05D003650 9.3e-14 80.9 181 30.4
Gohir.D01G174100 Gossypium hirsutum HOM05D001824 ORTHO05D003650 9.3e-14 80.9 169 33.1
MSTRG.27857 Avicennia marina HOM05D001824 ORTHO05D003650 1.2e-13 80.5 169 34.9
Sopen01g046080 Solanum pennellii HOM05D001824 ORTHO05D003650 1.2e-13 80.5 172 35.5
CARHR258760 Cardamine hirsuta HOM05D001824 ORTHO05D003650 1.6e-13 80.1 128 35.9
Potri.004G223100 Populus trichocarpa HOM05D001824 ORTHO05D003650 1.6e-13 80.1 169 35.5
SGA_v2.0_scaffold118G32460 Striga asiatica HOM05D001824 ORTHO05D003650 1.6e-13 80.1 163 35.6
Gorai.002G216200 Gossypium raimondii HOM05D001824 ORTHO05D003650 2.1e-13 79.7 169 32.5
Lsat_1_v5_gn_1_13101 Lactuca sativa HOM05D001824 ORTHO05D003650 2.1e-13 79.7 157 37.6
TWI14G1313 Tripterygium wilfordii HOM05D001824 ORTHO05D003650 2.1e-13 79.7 170 33.5
Aa31LG3G6730 Aethionema arabicum HOM05D001824 ORTHO05D003650 2.7e-13 79.3 160 32.5
MELO3C011823.2 Cucumis melo HOM05D001824 ORTHO05D003650 2.7e-13 79.3 185 30.3
Duzib248G0420 Durio zibethinus HOM05D001824 ORTHO05D003650 2.7e-13 79.3 176 31.2
SalBow3G0786 Salvia bowleyana HOM05D001824 ORTHO05D003650 2.7e-13 79.3 147 35.4
BcaC04g20841 Brassica carinata HOM05D001824 ORTHO05D003650 3.6e-13 79.0 159 34.0
C09p38570 Brassica napus HOM05D001824 ORTHO05D003650 3.6e-13 79.0 159 34.0
BolC9t56714H Brassica oleracea HOM05D001824 ORTHO05D003650 3.6e-13 79.0 159 34.0
ClCG11G013300 Citrullus lanatus HOM05D001824 ORTHO05D003650 3.6e-13 79.0 179 31.3
CsaV3_5G029820 Cucumis sativus L. HOM05D001824 ORTHO05D003650 3.6e-13 79.0 168 32.1
ECA247G2632 Erigeron canadensis HOM05D001824 ORTHO05D003650 3.6e-13 79.0 155 39.4
Sed0010683 Sechium edule HOM05D001824 ORTHO05D003650 4.6e-13 78.6 177 31.6
BraSC37t46144Z Brassica rapa HOM05D001824 ORTHO05D003650 6.1e-13 78.2 159 33.3
Sabra01G0169000 Salix brachista HOM05D001824 ORTHO05D003650 7.9e-13 77.8 168 34.5
A10p08620 Brassica napus HOM05D001824 ORTHO05D003650 1.0e-12 77.4 160 33.1
Carub.0008s0984 Capsella rubella HOM05D001824 ORTHO05D003650 1.4e-12 77.0 136 33.8
PGR102G0680 Punica granatum HOM05D001824 ORTHO05D003650 1.8e-12 76.6 162 32.7
AUR62023581 Chenopodium quinoa HOM05D001824 ORTHO05D003650 2.3e-12 76.3 169 32.0
Atru.chr6.784 Acer truncatum HOM05D001824 ORTHO05D003650 3.0e-12 75.9 168 35.7
Atru.chr6.813 Acer truncatum HOM05D001824 ORTHO05D003650 3.0e-12 75.9 168 35.7
TPR.G1781 Trifolium pratense HOM05D001824 ORTHO05D003650 3.0e-12 75.9 79 57.0
Manes.18G099500 Manihot esculenta HOM05D001824 ORTHO05D003650 5.1e-12 75.1 120 40.8
Os05g0432600 Oryza sativa ssp. japonica HOM05D001824 ORTHO05D003650 6.7e-12 74.7 177 32.8
Medtr1g096050 Medicago truncatula HOM05D001824 ORTHO05D003650 8.8e-12 74.3 79 55.7
Lj7C299G6 Lonicera japonica HOM05D001824 ORTHO05D003650 1.1e-11 73.9 157 35.0
Oeu064614.1 Olea europaea HOM05D001824 ORTHO05D003650 1.5e-11 73.6 177 30.5
THA.LOC104800038 Tarenaya hassleriana HOM05D001824 ORTHO05D003650 1.5e-11 73.6 160 30.6
Thecc.02G020300 Theobroma cacao HOM05D001824 ORTHO05D003650 1.9e-11 73.2 167 31.7
BcaB08g35374 Brassica carinata HOM05D001824 ORTHO05D003650 2.5e-11 72.8 136 36.8
Solyc01g103660.4 Solanum lycopersicum HOM05D001824 ORTHO05D003650 2.5e-11 72.8 153 33.3
RcHm_v2.0_Chr6g0272241 Rosa chinensis HOM05D001824 ORTHO05D003650 5.7e-11 71.6 127 39.4
TAR628G1477 Trochodendron aralioides HOM05D001824 ORTHO05D003650 7.4e-11 71.2 78 51.3
CAN.G798.59 Capsicum annuum HOM05D001824 ORTHO05D003650 1.3e-10 70.5 161 32.3
Sopen01g046070 Solanum pennellii HOM05D001824 ORTHO05D003650 1.3e-10 70.5 158 32.3
Gohir.D12G043000 Gossypium hirsutum HOM05D001824 ORTHO05D003650 2.2e-10 69.7 171 32.2
Gorai.008G045200 Gossypium raimondii HOM05D001824 ORTHO05D003650 2.2e-10 69.7 171 32.2
SalBow7G1597 Salvia bowleyana HOM05D001824 ORTHO05D003650 2.2e-10 69.7 196 31.1
Potri.013G115000 Populus trichocarpa HOM05D001824 ORTHO05D003650 4.8e-10 68.6 89 41.6
Ca_10600_v3 Cicer arietinum L. HOM05D001824 ORTHO05D003650 6.3e-10 68.2 79 51.9
Phvul.007G090800 Phaseolus vulgaris HOM05D001824 ORTHO05D003650 6.9e-09 64.7 65 50.8
Psat0s1g0040 Pisum sativum HOM05D001824 ORTHO05D003650 6.9e-09 64.7 79 49.4
Dinv41685 Davidia involucrata HOM05D001824 ORTHO05D003650 1.2e-08 63.9 97 46.4
HanXRQChr02g0041851 Helianthus annuus HOM05D001824 ORTHO05D003650 1.2e-08 63.9 129 38.0
DCAR_010072 Daucus carota HOM05D001824 ORTHO05D003650 1.5e-08 63.5 104 43.3
Ca_10601_v3 Cicer arietinum L. HOM05D001824 ORTHO05D003650 3.4e-08 62.4 63 57.1
DCAR_006680 Daucus carota HOM05D001824 ORTHO05D003650 1.0e-07 60.8 185 28.1
PGR042G3057 Punica granatum HOM05D001824 ORTHO05D003650 1.0e-07 60.8 83 44.6
MSTRG.1506 Avicennia marina HOM05D001824 ORTHO05D003650 2.2e-07 59.7 77 50.6
HPP92_025040 Vanilla planifolia HOM05D001824 ORTHO05D003650 2.2e-07 59.7 75 46.7
Actinidia00182 Actinidia chinensis HOM05D001824 ORTHO05D003650 2.9e-07 59.3 172 29.7
CAN.G798.57 Capsicum annuum HOM05D001824 ORTHO05D003650 2.5e-06 56.2 57 54.4


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