Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc66.50 Carica papaya HOM05D011855 ORTHO05D011609 3.1e-174 615.1 339 100.0
Thecc.08G181900 Theobroma cacao HOM05D011855 ORTHO05D011609 1.0e-44 184.9 309 39.8
Haze_17923 Corylus avellana HOM05D012719 ORTHO05D011609 6.1e-37 159.1 340 37.4
Potri.013G113800 Populus trichocarpa HOM05D012719 ORTHO05D011609 2.6e-35 153.7 344 35.2
Haze_17921 Corylus avellana HOM05D004678 ORTHO05D005880 3.3e-35 153.3 305 39.0
Cfa018193 Carpinus fangiana HOM05D012719 ORTHO05D011609 5.7e-35 152.5 349 37.0
Potri.019G084400 Populus trichocarpa HOM05D012719 ORTHO05D011609 1.1e-33 148.3 301 35.9
COL.COLO4_19764 Corchorus olitorius HOM05D012719 ORTHO05D011609 2.4e-33 147.1 312 32.4
Nn5g27743 Nelumbo nucifera HOM05D011855 ORTHO05D011609 6.5e-31 139.0 308 32.5
Sc01g0001740 Simmondsia chinensis HOM05D011855 ORTHO05D011609 1.8e-20 104.4 305 29.8
Ah.05g178050 Amaranthus hybridus HOM05D012719 ORTHO05D011609 3.0e-20 103.6 306 30.1
CAN.G370.24 Capsicum annuum HOM05D011855 ORTHO05D011609 6.8e-20 102.4 302 27.8
AUR62004652 Chenopodium quinoa HOM05D012719 ORTHO05D011609 2.0e-19 100.9 304 29.6
AUR62023571 Chenopodium quinoa HOM05D012719 ORTHO05D011609 3.4e-19 100.1 303 29.4
Dinv41697 Davidia involucrata HOM05D011855 ORTHO05D011609 8.3e-18 95.5 209 36.8
Nitab4.5_0000560g0170 Nicotiana tabacum HOM05D011855 ORTHO05D011609 3.2e-17 93.6 302 27.8
HPP92_016119 Vanilla planifolia HOM05D012719 ORTHO05D011609 2.7e-16 90.5 306 27.8
Solyc11g017410.1 Solanum lycopersicum HOM05D011855 ORTHO05D011609 1.7e-15 87.8 302 26.8
Sopen11g009360 Solanum pennellii HOM05D011855 ORTHO05D011609 2.3e-15 87.4 302 27.5
PGSC0003DMG400009225 Solanum tuberosum HOM05D011855 ORTHO05D011609 2.9e-15 87.0 298 27.2
Cfa018190 Carpinus fangiana HOM05D012719 ORTHO05D011609 6.6e-15 85.9 141 39.0
ATR0152G020 Amborella trichopoda HOM05D011855 ORTHO05D011609 1.5e-14 84.7 291 29.2
HPP92_011411 Vanilla planifolia HOM05D012719 ORTHO05D011609 6.1e-13 79.3 303 27.4
HPP92_004458 Vanilla planifolia HOM05D012719 ORTHO05D011609 6.4e-10 69.3 301 27.6
Os11g0198200 Oryza sativa ssp. japonica HOM05D065905 ORTHO05D011609 1.1e-09 68.6 338 23.4
Zm00001eb168890 Zea mays HOM05D065905 ORTHO05D011609 8.6e-07 58.9 290 23.4
Cc10_g11370 Coffea canephora HOM05D011855 ORTHO05D011609 7.3e-06 55.8 236 25.4


User provided reference genes

Program Settings