Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc66.124 Carica papaya HOM05D003420 ORTHO05D003970 7.0e-50 200.3 100 100.0
Eucgr.F04156 Eucalyptus grandis HOM05D003420 ORTHO05D003970 6.9e-29 130.6 65 96.9
CiPaw.15G007400 Carya illinoinensis HOM05D003420 ORTHO05D003970 2.0e-28 129.0 65 95.4
SGA_v2.0_scaffold48G18027 Striga asiatica HOM05D003420 ORTHO05D003970 1.3e-27 126.3 65 92.3
PGR102G1634 Punica granatum HOM05D003420 ORTHO05D003970 1.7e-27 125.9 65 92.3
QL02p034918 Quercus lobata HOM05D003420 ORTHO05D003970 1.7e-27 125.9 64 93.8
QL05p025142 Quercus lobata HOM05D003420 ORTHO05D003970 2.2e-27 125.6 64 93.8
QL05p046655 Quercus lobata HOM05D003420 ORTHO05D003970 2.2e-27 125.6 64 93.8
Cfa018227 Carpinus fangiana HOM05D003420 ORTHO05D003970 2.9e-27 125.2 65 93.8
Haze_13393 Corylus avellana HOM05D003420 ORTHO05D003970 2.9e-27 125.2 65 93.8
Migut.C00172 Erythranthe guttata HOM05D003420 ORTHO05D003970 2.9e-27 125.2 65 93.8
Aqoxy2G01386 Aquilegia oxysepala HOM05D003420 ORTHO05D003970 4.9e-27 124.4 64 95.3
CANSAT25G1859 Cannabis sativa HOM05D003420 ORTHO05D003970 4.9e-27 124.4 65 92.3
Lalb_Chr01g0009891 Lupinus albus HOM05D003420 ORTHO05D003970 4.9e-27 124.4 65 90.8
Sabra19G0098400 Salix brachista HOM05D003420 ORTHO05D003970 4.9e-27 124.4 65 92.3
Sabra19G0101900 Salix brachista HOM05D003420 ORTHO05D003970 4.9e-27 124.4 65 92.3
Sopen04g028480 Solanum pennellii HOM05D003420 ORTHO05D003970 4.9e-27 124.4 65 90.8
Manes.18G097100 Manihot esculenta HOM05D003420 ORTHO05D003970 6.4e-27 124.0 65 92.3
THA.LOC104800101 Tarenaya hassleriana HOM05D003420 ORTHO05D003970 6.4e-27 124.0 65 90.8
TAR625G1262 Trochodendron aralioides HOM05D003420 ORTHO05D003970 6.4e-27 124.0 65 93.8
Oeu027630.1 Olea europaea HOM05D003420 ORTHO05D003970 8.4e-27 123.6 65 92.3
Psat7g231160 Pisum sativum HOM05D003420 ORTHO05D003970 8.4e-27 123.6 65 87.7
Rhsim05G0166700 Rhododendron simsii HOM05D003420 ORTHO05D003970 8.4e-27 123.6 65 90.8
Actinidia22448 Actinidia chinensis HOM05D003420 ORTHO05D003970 1.1e-26 123.2 65 90.8
Potri.019G088100 Populus trichocarpa HOM05D003420 ORTHO05D003970 1.1e-26 123.2 65 90.8
TWI32G0430 Tripterygium wilfordii HOM05D003420 ORTHO05D003970 1.1e-26 123.2 65 90.8
Haze_17875 Corylus avellana HOM05D003420 ORTHO05D003970 1.4e-26 122.9 65 92.3
Nitab4.5_0001307g0060 Nicotiana tabacum HOM05D003420 ORTHO05D003970 1.4e-26 122.9 65 89.2
Nitab4.5_0002608g0090 Nicotiana tabacum HOM05D003420 ORTHO05D003970 1.4e-26 122.9 65 89.2
Sc02g0003530 Simmondsia chinensis HOM05D003420 ORTHO05D003970 1.4e-26 122.9 65 89.2
GSVIVG01038535001 Vitis vinifera HOM05D003420 ORTHO05D003970 1.4e-26 122.9 64 93.8
Hma1.2p1_0276F.1_g111220 Hydrangea macrophylla HOM05D003420 ORTHO05D003970 1.9e-26 122.5 65 90.8
Sp5g26850 Schrenkiella parvula HOM05D003420 ORTHO05D003970 1.9e-26 122.5 64 90.6
SpUn0020_0120 Schrenkiella parvula HOM05D003420 ORTHO05D003970 1.9e-26 122.5 64 90.6
MSTRG.963 Avicennia marina HOM05D003420 ORTHO05D003970 2.4e-26 122.1 65 90.8
CSS0045751 Camellia sinensis var. sinensis HOM05D003420 ORTHO05D003970 2.4e-26 122.1 65 90.8
Migut.C00145 Erythranthe guttata HOM05D003420 ORTHO05D003970 2.4e-26 122.1 65 90.8
Lalb_Chr19g0129871 Lupinus albus HOM05D003420 ORTHO05D003970 2.4e-26 122.1 65 89.2
BcaC08g46613 Brassica carinata HOM05D003420 ORTHO05D003970 3.2e-26 121.7 64 89.1
A07p37970 Brassica napus HOM05D003420 ORTHO05D003970 3.2e-26 121.7 64 89.1
C06p45890 Brassica napus HOM05D003420 ORTHO05D003970 3.2e-26 121.7 64 89.1
BolC6t39641H Brassica oleracea HOM05D003420 ORTHO05D003970 3.2e-26 121.7 64 89.1
BraA07t31362Z Brassica rapa HOM05D003420 ORTHO05D003970 3.2e-26 121.7 64 89.1
Carub.0002s1858 Capsella rubella HOM05D003420 ORTHO05D003970 3.2e-26 121.7 64 89.1
Potri.013G117400 Populus trichocarpa HOM05D003420 ORTHO05D003970 3.2e-26 121.7 65 89.2
Sabra13G0099500 Salix brachista HOM05D003420 ORTHO05D003970 3.2e-26 121.7 65 90.8
Solyc04g072290.3 Solanum lycopersicum HOM05D003420 ORTHO05D003970 3.2e-26 121.7 65 89.2
AL2G31400 Arabidopsis lyrata HOM05D003420 ORTHO05D003970 4.2e-26 121.3 64 90.6
ClCG08G008720 Citrullus lanatus HOM05D003420 ORTHO05D003970 4.2e-26 121.3 65 89.2
Thhalv10018180m.g Eutrema salsugineum HOM05D003420 ORTHO05D003970 4.2e-26 121.3 64 89.1
AT1G71820 Arabidopsis thaliana HOM05D003420 ORTHO05D003970 7.1e-26 120.6 64 89.1
MELO3C019945.2 Cucumis melo HOM05D003420 ORTHO05D003970 7.1e-26 120.6 65 89.2
CsaV3_6G004750 Cucumis sativus L. HOM05D003420 ORTHO05D003970 7.1e-26 120.6 65 87.7
TPR.G31331 Trifolium pratense HOM05D003420 ORTHO05D003970 7.1e-26 120.6 65 83.1
Atru.chr13.1894 Acer truncatum HOM05D003420 ORTHO05D003970 9.3e-26 120.2 65 86.2
CAN.G1010.15 Capsicum annuum HOM05D003420 ORTHO05D003970 9.3e-26 120.2 65 86.2
Cc10_g06190 Coffea canephora HOM05D003420 ORTHO05D003970 1.2e-25 119.8 65 87.7
Medtr4g024570 Medicago truncatula HOM05D003420 ORTHO05D003970 1.2e-25 119.8 65 86.2
PSO210G4421 Papaver somniferum HOM05D003420 ORTHO05D003970 1.2e-25 119.8 65 89.2
PSO447G0346 Papaver somniferum HOM05D003420 ORTHO05D003970 1.2e-25 119.8 65 89.2
Peaxi162Scf00226g00925 Petunia axillaris HOM05D003420 ORTHO05D003970 1.2e-25 119.8 65 86.2
Prupe.4G277400 Prunus persica HOM05D003420 ORTHO05D003970 1.2e-25 119.8 65 87.7
CARHR290940 Cardamine hirsuta HOM05D003420 ORTHO05D003970 1.6e-25 119.4 64 87.5
Lj4g0005231 Lotus japonicus HOM05D003420 ORTHO05D003970 1.6e-25 119.4 65 87.7
Nn8g40471 Nelumbo nucifera HOM05D003420 ORTHO05D003970 1.6e-25 119.4 68 85.3
GSVIVG01022846001 Vitis vinifera HOM05D003420 ORTHO05D003970 1.6e-25 119.4 65 89.2
TWI32G0245 Tripterygium wilfordii HOM05D003420 ORTHO05D003970 2.1e-25 119.0 65 86.2
BcaC08g45755 Brassica carinata HOM05D003420 ORTHO05D003970 2.7e-25 118.6 61 90.2
A07p30580 Brassica napus HOM05D003420 ORTHO05D003970 2.7e-25 118.6 61 90.2
C06p35360 Brassica napus HOM05D003420 ORTHO05D003970 2.7e-25 118.6 61 90.2
BolC6t38641H Brassica oleracea HOM05D003420 ORTHO05D003970 2.7e-25 118.6 61 90.2
BraA07t30693Z Brassica rapa HOM05D003420 ORTHO05D003970 2.7e-25 118.6 61 90.2
CSS0008854 Camellia sinensis var. sinensis HOM05D003420 ORTHO05D003970 2.7e-25 118.6 65 86.2
Glyma.01G140600 Glycine max HOM05D003420 ORTHO05D003970 2.7e-25 118.6 65 86.2
Glyma.03G026900 Glycine max HOM05D003420 ORTHO05D003970 2.7e-25 118.6 65 86.2
MBI02_g44124_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 3.5e-25 118.2 65 89.2
VMungo0331G0815 Vigna mungo HOM05D003420 ORTHO05D003970 6.0e-25 117.5 65 86.2
CiPaw.15G007500 Carya illinoinensis HOM05D003420 ORTHO05D003970 7.8e-25 117.1 65 89.2
Duzib187G1187 Durio zibethinus HOM05D003420 ORTHO05D003970 1.0e-24 116.7 65 86.2
Thecc.01G140700 Theobroma cacao HOM05D003420 ORTHO05D003970 1.0e-24 116.7 65 86.2
Actinidia15626 Actinidia chinensis HOM05D003420 ORTHO05D003970 1.3e-24 116.3 65 86.2
Phvul.010G082700 Phaseolus vulgaris HOM05D003420 ORTHO05D003970 1.3e-24 116.3 65 84.6
EL10Ac8g19742 Beta vulgaris HOM05D003420 ORTHO05D003970 1.7e-24 115.9 64 85.9
CDE04G2480 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 2.3e-24 115.5 65 86.2
COL.COLO4_12104 Corchorus olitorius HOM05D003420 ORTHO05D003970 2.3e-24 115.5 64 85.9
Gohir.A10G068000 Gossypium hirsutum HOM05D003420 ORTHO05D003970 2.3e-24 115.5 65 83.1
Gohir.D10G107600 Gossypium hirsutum HOM05D003420 ORTHO05D003970 2.3e-24 115.5 65 83.1
Gorai.011G117900 Gossypium raimondii HOM05D003420 ORTHO05D003970 2.3e-24 115.5 65 83.1
Lj4C710G5 Lonicera japonica HOM05D003420 ORTHO05D003970 3.9e-24 114.8 65 86.2
vmacro11081 Vaccinium macrocarpon HOM05D003420 ORTHO05D003970 3.9e-24 114.8 80 75.0
Aa31LG4G8810 Aethionema arabicum HOM05D003420 ORTHO05D003970 6.6e-24 114.0 65 87.7
MD14G1071700 Malus domestica HOM05D003420 ORTHO05D003970 6.6e-24 114.0 65 84.6
RcHm_v2.0_Chr3g0482841 Rosa chinensis HOM05D003420 ORTHO05D003970 8.7e-24 113.6 65 83.1
Ciclev10000376m.g Citrus clementina HOM05D003420 ORTHO05D003970 1.9e-23 112.5 67 82.1
MBI05_g36581_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 1.9e-23 112.5 65 81.5
MBI05_g36592_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 1.9e-23 112.5 65 81.5
Atru.chr7.57 Acer truncatum HOM05D003420 ORTHO05D003970 2.5e-23 112.1 63 84.1
Sed0005269 Sechium edule HOM05D003420 ORTHO05D003970 3.3e-23 111.7 65 80.0
FvH4_6g24280 Fragaria vesca HOM05D003420 ORTHO05D003970 4.3e-23 111.3 65 81.5
FAN14G5243 Fragaria x ananassa HOM05D003420 ORTHO05D003970 4.3e-23 111.3 65 81.5
MBI05_g43692_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 4.3e-23 111.3 65 81.5
FAN05G2825 Fragaria x ananassa HOM05D003420 ORTHO05D003970 7.3e-23 110.5 65 81.5
Manes.02G187400 Manihot esculenta HOM05D003420 ORTHO05D003970 1.3e-22 109.8 61 83.6
Hund17515 Selenicereus undatus HOM05D003420 ORTHO05D003970 2.1e-22 109.0 62 85.5
unitig_46.g18008 Utricularia gibba HOM05D003420 ORTHO05D003970 2.1e-22 109.0 92 63.0
RcHm_v2.0_Chr1g0335041 Rosa chinensis HOM05D003420 ORTHO05D003970 2.8e-22 108.6 65 78.5
Ah.09g232700 Amaranthus hybridus HOM05D003420 ORTHO05D003970 6.2e-22 107.5 67 79.1
CDE06G0862 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 6.2e-22 107.5 65 78.5
ECA246G4467 Erigeron canadensis HOM05D003420 ORTHO05D003970 1.4e-21 106.3 64 76.6
ATR0815G027 Amborella trichopoda HOM05D003420 ORTHO05D003970 1.8e-21 105.9 63 79.4
ATR0824G022 Amborella trichopoda HOM05D003420 ORTHO05D003970 1.8e-21 105.9 65 76.9
Lsat_1_v5_gn_6_100921 Lactuca sativa HOM05D003420 ORTHO05D003970 1.8e-21 105.9 64 79.7
HanXRQChr01g0002061 Helianthus annuus HOM05D003420 ORTHO05D003970 2.4e-21 105.5 62 79.0
arahy.Tifrunner.gnm1.ann1.GQ31QR Arachis hypogaea HOM05D003420 ORTHO05D003970 4.0e-21 104.8 65 73.8
Atru.chr13.1960 Acer truncatum HOM05D003420 ORTHO05D003970 5.3e-21 104.4 63 79.4
Zm00001eb254950 Zea mays HOM05D003420 ORTHO05D003970 5.3e-21 104.4 63 79.4
HanXRQChr10g0278771 Helianthus annuus HOM05D003420 ORTHO05D003970 6.9e-21 104.0 64 81.2
AUR62027529 Chenopodium quinoa HOM05D003420 ORTHO05D003970 7.6e-20 100.5 84 64.3
AUR62030227 Chenopodium quinoa HOM05D003420 ORTHO05D003970 7.6e-20 100.5 84 64.3
Zm00001eb194380 Zea mays HOM05D003420 ORTHO05D003970 7.6e-20 100.5 62 77.4
DCAR_013169 Daucus carota HOM05D003420 ORTHO05D003970 2.9e-19 98.6 48 93.8
arahy.Tifrunner.gnm1.ann1.PV9APJ Arachis hypogaea HOM05D003420 ORTHO05D003970 4.2e-18 94.7 49 87.8
HanXRQChr10g0278751 Helianthus annuus HOM05D003420 ORTHO05D003970 7.1e-18 94.0 64 71.9
Psat4g195800 Pisum sativum HOM05D003420 ORTHO05D003970 3.3e-15 85.1 63 61.9
FAN02G2135 Fragaria x ananassa HOM05D003420 ORTHO05D003970 7.4e-15 84.0 44 90.9
Atru.chr6.1390 Acer truncatum HOM05D003420 ORTHO05D003970 9.6e-15 83.6 46 82.6
SEGI_07888 Sequoiadendron giganteum HOM05D003420 ORTHO05D003970 1.4e-13 79.7 63 63.5
Mapoly0001s0359 Marchantia polymorpha HOM05D003420 ORTHO05D003970 3.4e-12 75.1 62 61.3
Ca_19958_v3 Cicer arietinum L. HOM05D003420 ORTHO05D003970 4.5e-12 74.7 56 69.6
AagrBONN_evm.TU.Sc2ySwM_117.1498 Anthoceros agrestis HOM05D003420 ORTHO05D003970 3.2e-10 68.6 49 61.2
AagrBONN_evm.TU.Sc2ySwM_228.2748 Anthoceros agrestis HOM05D003420 ORTHO05D003970 7.1e-10 67.4 47 68.1
Pp3c8_3920 Physcomitrium patens HOM05D003420 ORTHO05D003970 3.5e-09 65.1 53 56.6
SMO298G0019 Selaginella moellendorffii HOM05D003420 ORTHO05D003970 5.1e-08 61.2 56 51.8
CBR_g30506 Chara braunii HOM05D003420 ORTHO05D003970 3.3e-07 58.5 52 50.0


User provided reference genes

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