Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc657.4 Carica papaya HOM05D000004 ORTHO05D000563 5.1e-66 254.2 125 100.0
Cpa.g.sc60.53 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-18 96.3 61 72.1
Cpa.g.sc0.47 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-17 92.8 55 80.0
Cpa.g.sc175.28 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-13 79.7 61 68.9
Cpa.g.sc134.12 Carica papaya HOM05D000004 ORTHO05D000563 7.3e-12 74.3 103 43.7
Cpa.g.sc1884.2 Carica papaya HOM05D000004 ORTHO05D000563 9.5e-12 73.9 61 52.5
Cpa.g.sc28.117 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-10 70.5 66 43.9
Cpa.g.sc40.58 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-10 70.5 44 72.7
PGR004G1184 Punica granatum HOM05D000004 ORTHO05D000563 4.0e-10 68.6 61 47.5
THA.LOC109116955 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 4.0e-10 68.6 61 45.9
THA.LOC109116513 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 5.2e-10 68.2 61 45.9
Cpa.g.sc143.5 Carica papaya HOM05D000004 ORTHO05D000563 8.9e-10 67.4 50 64.0
PGR031G2848 Punica granatum HOM05D000004 ORTHO05D000002 8.9e-10 67.4 61 45.9
THA.LOC104799780 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 8.9e-10 67.4 60 45.0
THA.LOC104821896 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 8.9e-10 67.4 60 45.0
PGR083G2791 Punica granatum HOM05D000004 ORTHO05D000563 1.2e-09 67.0 61 45.9
Cpa.g.sc38.20 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-09 66.6 61 47.5
Cpa.g.sc778.1 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-09 66.6 61 49.2
Cpa.g.sc0.24 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-09 66.2 100 32.0
Cpa.g.sc971.2 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-09 66.2 62 46.8
PGR119G1513 Punica granatum HOM05D000004 ORTHO05D000002 2.0e-09 66.2 61 45.9
Cpa.g.sc30.36 Carica papaya HOM05D000004 ORTHO05D000563 2.6e-09 65.9 61 44.3
PGR025G0001 Punica granatum HOM05D000004 ORTHO05D000002 2.6e-09 65.9 61 45.9
PGR044G0113 Punica granatum HOM05D000004 ORTHO05D000563 2.6e-09 65.9 61 45.9
PGR044G1656 Punica granatum HOM05D000004 ORTHO05D000563 2.6e-09 65.9 61 45.9
PGR044G2607 Punica granatum HOM05D000004 ORTHO05D000002 2.6e-09 65.9 61 45.9
PGR052G0001 Punica granatum HOM05D000004 ORTHO05D000002 2.6e-09 65.9 61 45.9
PGR115G0001 Punica granatum HOM05D000004 ORTHO05D000002 2.6e-09 65.9 61 45.9
PGR119G0902 Punica granatum HOM05D000004 ORTHO05D000563 2.6e-09 65.9 61 45.9
PGR119G1563 Punica granatum HOM05D000004 ORTHO05D000563 2.6e-09 65.9 61 45.9
PGR139G0001 Punica granatum HOM05D000004 ORTHO05D000002 2.6e-09 65.9 61 45.9
PGR142G1811 Punica granatum HOM05D000004 ORTHO05D000002 2.6e-09 65.9 61 45.9
Cpa.g.sc2811.1 Carica papaya HOM05D000004 ORTHO05D000563 3.4e-09 65.5 61 47.5
THA.LOC104806048 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 3.4e-09 65.5 60 43.3
Cpa.g.sc1555.2 Carica papaya HOM05D000004 ORTHO05D000563 4.4e-09 65.1 62 46.8
Cpa.g.sc225.4 Carica papaya HOM05D000004 ORTHO05D000563 4.4e-09 65.1 61 44.3
Cpa.g.sc61.2 Carica papaya HOM05D000004 ORTHO05D000563 4.4e-09 65.1 61 45.9
THA.LOC109116027 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.4e-09 65.1 60 45.0
MSTRG.13863 Avicennia marina HOM05D000004 ORTHO05D000563 7.5e-09 64.3 60 43.3
MSTRG.20360 Avicennia marina HOM05D000004 ORTHO05D000002 7.5e-09 64.3 60 43.3
Cpa.g.sc3290.1 Carica papaya HOM05D000004 ORTHO05D000563 7.5e-09 64.3 61 45.9
PGR004G1708 Punica granatum HOM05D000004 ORTHO05D000563 7.5e-09 64.3 61 44.3
PGR083G1623 Punica granatum HOM05D000004 ORTHO05D000002 7.5e-09 64.3 61 44.3
Cpa.g.sc1083.1 Carica papaya HOM05D000004 ORTHO05D000563 9.9e-09 63.9 61 45.9
Cpa.g.sc143.15 Carica papaya HOM05D000004 ORTHO05D000563 9.9e-09 63.9 61 44.3
PGR102G2704 Punica granatum HOM05D000004 ORTHO05D000002 9.9e-09 63.9 61 44.3
SHI31146 Sapria himalayana HOM05D000004 ORTHO05D000563 1.3e-08 63.5 61 44.3
Cpa.g.sc1364.1 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-08 63.2 61 44.3
Cpa.g.sc38.15 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-08 63.2 61 44.3
Cpa.g.sc181.6 Carica papaya HOM05D000004 ORTHO05D000563 2.2e-08 62.8 61 44.3
Cpa.g.sc2066.1 Carica papaya HOM05D000004 ORTHO05D000563 2.9e-08 62.4 61 45.9
Cpa.g.sc203.12 Carica papaya HOM05D000004 ORTHO05D000563 4.9e-08 61.6 57 45.6
Cpa.g.sc39.101 Carica papaya HOM05D000004 ORTHO05D000563 4.9e-08 61.6 46 67.4
Cpa.g.sc39.88 Carica papaya HOM05D000004 ORTHO05D000563 4.9e-08 61.6 61 39.3
Cpa.g.sc54.19 Carica papaya HOM05D000004 ORTHO05D000563 4.9e-08 61.6 61 44.3
PGR119G1621 Punica granatum HOM05D000004 ORTHO05D000563 4.9e-08 61.6 61 42.6
Cpa.g.sc11.81 Carica papaya HOM05D000004 ORTHO05D000563 6.4e-08 61.2 61 42.6
Cpa.g.sc38.3 Carica papaya HOM05D000004 ORTHO05D000563 6.4e-08 61.2 61 44.3
Cpa.g.sc330.2 Carica papaya HOM05D000004 ORTHO05D000563 8.3e-08 60.8 60 41.7
SHI33683 Sapria himalayana HOM05D000004 ORTHO05D000563 8.3e-08 60.8 61 44.3
Atru.chr8.715 Acer truncatum HOM05D000004 ORTHO05D000563 1.1e-07 60.5 67 41.8
Cpa.g.sc303.9 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-07 60.5 57 45.6
Cpa.g.sc44.39 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-07 60.5 61 41.0
Cpa.g.sc56.54 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-07 60.5 61 42.6
Cpa.g.sc71.24 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-07 60.5 56 44.6
THA.LOC104807122 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.1e-07 60.5 60 46.7
Cpa.g.sc154.9 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-07 60.1 61 42.6
Cpa.g.sc303.2 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-07 60.1 61 42.6
Cpa.g.sc1555.3 Carica papaya HOM05D000004 ORTHO05D000563 1.9e-07 59.7 61 42.6
SHI32913 Sapria himalayana HOM05D000004 ORTHO05D000563 1.9e-07 59.7 61 42.6
Cpa.g.sc210.11 Carica papaya HOM05D000004 ORTHO05D000563 2.4e-07 59.3 61 42.6
THA.LOC104818534 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 2.4e-07 59.3 60 43.3
PGR027G0001 Punica granatum HOM05D000004 ORTHO05D000002 3.2e-07 58.9 60 41.7
PGR042G1478 Punica granatum HOM05D000004 ORTHO05D000002 3.2e-07 58.9 60 41.7
THA.LOC109116034 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.2e-07 58.9 93 33.3
Cpa.g.sc22.77 Carica papaya HOM05D000004 ORTHO05D000563 4.1e-07 58.5 61 42.6
Cpa.g.sc60.45 Carica papaya HOM05D000004 ORTHO05D000563 4.1e-07 58.5 61 42.6
PGR031G3196 Punica granatum HOM05D000004 ORTHO05D000002 4.1e-07 58.5 60 41.7
PGR031G3733 Punica granatum HOM05D000004 ORTHO05D000563 4.1e-07 58.5 61 36.1
PGR083G2735 Punica granatum HOM05D000004 ORTHO05D000002 4.1e-07 58.5 60 41.7
BcaC02g10606 Brassica carinata HOM05D012556 ORTHO05D000563 5.4e-07 58.2 64 40.6
Cpa.g.sc32.166 Carica papaya HOM05D000004 ORTHO05D000563 5.4e-07 58.2 61 42.6
PGR083G1943 Punica granatum HOM05D000004 ORTHO05D000002 5.4e-07 58.2 60 41.7
Cpa.g.sc154.5 Carica papaya HOM05D000004 ORTHO05D000563 7.1e-07 57.8 57 42.1
PGR029G0001 Punica granatum HOM05D000004 ORTHO05D000002 7.1e-07 57.8 60 40.0
PGR029G0003 Punica granatum HOM05D000004 ORTHO05D000002 7.1e-07 57.8 60 40.0
PGR029G0004 Punica granatum HOM05D000004 ORTHO05D000002 7.1e-07 57.8 60 40.0
PGR029G0005 Punica granatum HOM05D000004 ORTHO05D000002 7.1e-07 57.8 60 40.0
PGR085G0001 Punica granatum HOM05D000004 ORTHO05D000002 7.1e-07 57.8 60 40.0
PGR085G0002 Punica granatum HOM05D000004 ORTHO05D000002 7.1e-07 57.8 60 40.0
PGR085G0003 Punica granatum HOM05D000004 ORTHO05D000002 7.1e-07 57.8 60 40.0
PGR085G0004 Punica granatum HOM05D000004 ORTHO05D000002 7.1e-07 57.8 60 40.0
PGR085G0005 Punica granatum HOM05D000004 ORTHO05D000002 7.1e-07 57.8 60 40.0
PGR085G0006 Punica granatum HOM05D000004 ORTHO05D000002 7.1e-07 57.8 60 40.0
Cpa.g.sc88.32 Carica papaya HOM05D000004 ORTHO05D000563 9.2e-07 57.4 57 42.1
PGR031G1605 Punica granatum HOM05D000004 ORTHO05D000002 9.2e-07 57.4 60 41.7
Sed0009597 Sechium edule HOM05D010826 ORTHO05D013073 9.2e-07 57.4 61 39.3
THA.LOC104822353 Tarenaya hassleriana HOM05D000442 ORTHO05D001979 9.2e-07 57.4 60 38.3
Cpa.g.sc0.37 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-06 57.0 60 41.7
QL07p027315 Quercus lobata HOM05D000004 ORTHO05D000002 1.2e-06 57.0 60 40.0
TPR.G39664 Trifolium pratense HOM05D000004 ORTHO05D000563 1.2e-06 57.0 65 43.1
Cpa.g.sc110.31 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-06 56.6 57 42.1
Cpa.g.sc28.100 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-06 56.6 52 46.2
Cpa.g.sc31.28 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-06 56.6 61 41.0
Cpa.g.sc28.97 Carica papaya HOM05D000004 ORTHO05D000563 2.1e-06 56.2 53 41.5
Cpa.g.sc31.3 Carica papaya HOM05D000004 ORTHO05D000563 2.1e-06 56.2 45 60.0
SHI34774 Sapria himalayana HOM05D000004 ORTHO05D000002 2.1e-06 56.2 57 36.8
SHI44110 Sapria himalayana HOM05D000004 ORTHO05D000563 2.1e-06 56.2 61 42.6
SHI49228 Sapria himalayana HOM05D000004 ORTHO05D000563 2.1e-06 56.2 61 42.6
Cpa.g.sc445.2 Carica papaya HOM05D000004 ORTHO05D000563 3.5e-06 55.5 61 41.0
Atru.chr8.565 Acer truncatum HOM05D000004 ORTHO05D000563 4.6e-06 55.1 60 38.3
SHI54914 Sapria himalayana HOM05D000004 ORTHO05D009927 6.0e-06 54.7 61 36.1


User provided reference genes

Program Settings