Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc65.83 Carica papaya HOM05D006307 ORTHO05D008123 2.0e-57 225.7 130 100.0
Cpa.g.sc65.81 Carica papaya HOM05D006307 ORTHO05D008123 2.0e-20 102.8 154 54.5
TAR633G2235 Trochodendron aralioides HOM05D006307 ORTHO05D008123 4.9e-11 71.6 70 58.6
CSS0037764 Camellia sinensis var. sinensis HOM05D006307 ORTHO05D008123 2.4e-10 69.3 70 72.9
Oeu001370.1 Olea europaea HOM05D006307 ORTHO05D008123 3.2e-10 68.9 93 49.5
Duzib114G0239 Durio zibethinus HOM05D006307 ORTHO05D008123 7.1e-10 67.8 69 56.5
Cfa001179 Carpinus fangiana HOM05D006307 ORTHO05D008123 1.2e-09 67.0 64 73.4
MD01G1172000 Malus domestica HOM05D006307 ORTHO05D008123 2.1e-09 66.2 69 55.1
Prupe.2G267300 Prunus persica HOM05D006307 ORTHO05D008123 3.5e-09 65.5 69 55.1
COL.COLO4_19496 Corchorus olitorius HOM05D006307 ORTHO05D008123 6.0e-09 64.7 100 47.0
Ciclev10033529m.g Citrus clementina HOM05D006307 ORTHO05D008123 7.8e-09 64.3 99 43.4
Dinv34513 Davidia involucrata HOM05D006307 ORTHO05D008123 7.8e-09 64.3 108 54.6
CiPaw.01G088900 Carya illinoinensis HOM05D006307 ORTHO05D008123 1.3e-08 63.5 71 67.6
Gorai.012G012900 Gossypium raimondii HOM05D006307 ORTHO05D008123 1.3e-08 63.5 94 40.4
Dinv21870 Davidia involucrata HOM05D006307 ORTHO05D008123 2.3e-08 62.8 105 52.4
Gohir.D04G010800 Gossypium hirsutum HOM05D006307 ORTHO05D008123 5.1e-08 61.6 94 39.4
CANSAT56G1764 Cannabis sativa HOM05D006307 ORTHO05D008123 6.6e-08 61.2 71 49.3
Gohir.A05G404900 Gossypium hirsutum HOM05D006307 ORTHO05D008123 6.6e-08 61.2 94 40.4
TWI09G1245 Tripterygium wilfordii HOM05D006307 ORTHO05D008123 8.7e-08 60.8 147 39.5
RcHm_v2.0_Chr1g0372771 Rosa chinensis HOM05D006307 ORTHO05D008123 1.5e-07 60.1 74 50.0
Thecc.10G187500 Theobroma cacao HOM05D006307 ORTHO05D008123 1.5e-07 60.1 159 34.0
FvH4_7g26311 Fragaria vesca HOM05D006307 ORTHO05D008123 1.9e-07 59.7 74 50.0
FAN01G0868 Fragaria x ananassa HOM05D006307 ORTHO05D008123 3.3e-07 58.9 74 50.0
GSVIVG01032869001 Vitis vinifera HOM05D006307 ORTHO05D008123 3.3e-07 58.9 102 53.9
Manes.07G141400 Manihot esculenta HOM05D006307 ORTHO05D008123 4.3e-07 58.5 65 50.8
CAN.G77.11 Capsicum annuum HOM05D006307 ORTHO05D008123 5.6e-07 58.2 90 43.3
THA.LOC104824373 Tarenaya hassleriana HOM05D006307 ORTHO05D008123 5.6e-07 58.2 74 45.9
TWI73G0583 Tripterygium wilfordii HOM05D006307 ORTHO05D008123 5.6e-07 58.2 70 54.3
Nitab4.5_0001493g0020 Nicotiana tabacum HOM05D006307 ORTHO05D008123 9.6e-07 57.4 69 50.7
Nn2g10220 Nelumbo nucifera HOM05D006307 ORTHO05D008123 1.3e-06 57.0 104 45.2
Atru.chr12.221 Acer truncatum HOM05D006307 ORTHO05D008123 1.6e-06 56.6 71 46.5
PGSC0003DMG400005260 Solanum tuberosum HOM05D006307 ORTHO05D008123 1.6e-06 56.6 107 41.1
Eucgr.G03171 Eucalyptus grandis HOM05D006307 ORTHO05D008123 2.8e-06 55.8 69 47.8
PGR142G3034 Punica granatum HOM05D006307 ORTHO05D008123 2.8e-06 55.8 73 47.9
vmacro09945 Vaccinium macrocarpon HOM05D006307 ORTHO05D008123 2.8e-06 55.8 70 65.7


User provided reference genes

Program Settings