Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc65.47 Carica papaya HOM05D007903 ORTHO05D009925 3.8e-88 328.2 170 100.0
Cfa015866 Carpinus fangiana HOM05D007903 ORTHO05D009925 3.1e-21 105.9 173 44.5
Ciclev10017603m.g Citrus clementina HOM05D007903 ORTHO05D009925 6.9e-21 104.8 183 44.8
Potri.008G122700 Populus trichocarpa HOM05D007903 ORTHO05D009925 6.9e-21 104.8 170 45.9
Potri.010G122600 Populus trichocarpa HOM05D007903 ORTHO05D009925 4.4e-20 102.1 167 44.9
Haze_00633 Corylus avellana HOM05D007903 ORTHO05D009925 1.7e-19 100.1 177 45.2
CiPaw.05G239700 Carya illinoinensis HOM05D007903 ORTHO05D009925 1.1e-18 97.4 185 42.2
QL01p040711 Quercus lobata HOM05D007903 ORTHO05D009925 1.9e-18 96.7 151 43.7
Hma1.2p1_1875F.1_g306260 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 4.2e-18 95.5 179 41.3
Hma1.2p1_2787F.1_g328510 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 4.6e-17 92.0 151 43.0
Sabra10G0092700 Salix brachista HOM05D007903 ORTHO05D009925 4.6e-17 92.0 168 42.9
Manes.14G104700 Manihot esculenta HOM05D007903 ORTHO05D009925 6.0e-17 91.7 176 42.6
Sabra08G0093200 Salix brachista HOM05D007903 ORTHO05D009925 1.0e-16 90.9 167 44.3
Thecc.02G225400 Theobroma cacao HOM05D007903 ORTHO05D009925 1.7e-16 90.1 184 41.3
TWI31G0067 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 5.1e-16 88.6 165 40.6
BcaB03g15412 Brassica carinata HOM05D007903 ORTHO05D009925 1.9e-15 86.7 167 39.5
CSS0015489 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 4.3e-15 85.5 171 40.9
MD16G1040300 Malus domestica HOM05D007903 ORTHO05D009925 4.3e-15 85.5 167 37.1
Sp5g23400 Schrenkiella parvula HOM05D007903 ORTHO05D009925 9.6e-15 84.3 165 38.2
THA.LOC104821918 Tarenaya hassleriana HOM05D007903 ORTHO05D009925 2.1e-14 83.2 161 41.6
MD13G1039400 Malus domestica HOM05D007903 ORTHO05D009925 8.1e-14 81.3 168 37.5
AL2G27200 Arabidopsis lyrata HOM05D007903 ORTHO05D009925 1.4e-13 80.5 162 37.0
Thhalv10019802m.g Eutrema salsugineum HOM05D007903 ORTHO05D009925 1.4e-13 80.5 168 35.7
Carub.0002s1485 Capsella rubella HOM05D007903 ORTHO05D009925 3.1e-13 79.3 168 37.5
Prupe.1G313800 Prunus persica HOM05D007903 ORTHO05D009925 3.1e-13 79.3 173 37.6
CsaV3_5G034450 Cucumis sativus L. HOM05D007903 ORTHO05D009925 6.9e-13 78.2 150 42.7
Gohir.D09G043400 Gossypium hirsutum HOM05D007903 ORTHO05D009925 9.0e-13 77.8 170 40.0
Gorai.006G050300 Gossypium raimondii HOM05D007903 ORTHO05D009925 9.0e-13 77.8 170 40.0
AT1G68350 Arabidopsis thaliana HOM05D007903 ORTHO05D009925 1.5e-12 77.0 167 37.1
Duzib268G0450 Durio zibethinus HOM05D007903 ORTHO05D009925 1.5e-12 77.0 180 38.9
Gohir.A09G042700 Gossypium hirsutum HOM05D007903 ORTHO05D009925 2.6e-12 76.3 170 38.2
RcHm_v2.0_Chr4g0434841 Rosa chinensis HOM05D007903 ORTHO05D009925 2.6e-12 76.3 138 39.9
BcaB05g24366 Brassica carinata HOM05D007903 ORTHO05D009925 5.8e-12 75.1 164 37.8
PGSC0003DMG400006002 Solanum tuberosum HOM05D007903 ORTHO05D009925 1.7e-11 73.6 175 37.1
BcaC08g45975 Brassica carinata HOM05D007903 ORTHO05D009925 2.2e-11 73.2 167 34.7
C06p37650 Brassica napus HOM05D007903 ORTHO05D009925 2.2e-11 73.2 167 34.7
BolC6t38868H Brassica oleracea HOM05D007903 ORTHO05D009925 2.2e-11 73.2 167 34.7
CAN.G25.18 Capsicum annuum HOM05D007903 ORTHO05D009925 2.9e-11 72.8 170 38.8
FvH4_4g27040 Fragaria vesca HOM05D007903 ORTHO05D009925 8.4e-11 71.2 143 36.4
FAN07G0160 Fragaria x ananassa HOM05D007903 ORTHO05D009925 8.4e-11 71.2 143 37.1
FAN12G1984 Fragaria x ananassa HOM05D007903 ORTHO05D009925 8.4e-11 71.2 143 36.4
TAR374G1449 Trochodendron aralioides HOM05D007903 ORTHO05D009925 1.1e-10 70.9 170 34.7
FAN22G0942 Fragaria x ananassa HOM05D007903 ORTHO05D009925 4.2e-10 68.9 147 36.7
ClCG05G022570 Citrullus lanatus HOM05D007903 ORTHO05D009925 5.4e-10 68.6 149 38.9
FAN12G2568 Fragaria x ananassa HOM05D007903 ORTHO05D009925 5.4e-10 68.6 171 33.3
CARHR061060 Cardamine hirsuta HOM05D007903 ORTHO05D009925 7.1e-10 68.2 164 34.8
Sopen04g002420 Solanum pennellii HOM05D007903 ORTHO05D009925 2.1e-09 66.6 137 34.3
Sc04g0006190 Simmondsia chinensis HOM05D007903 ORTHO05D009925 3.5e-09 65.9 163 35.0
Lj5g0001705 Lotus japonicus HOM05D007903 ORTHO05D009925 4.6e-09 65.5 182 35.7
Aqoxy3G00252 Aquilegia oxysepala HOM05D007903 ORTHO05D009925 1.8e-08 63.5 173 32.9
Sed0015064 Sechium edule HOM05D007903 ORTHO05D009925 3.9e-08 62.4 168 36.9
DCAR_030171 Daucus carota HOM05D007903 ORTHO05D009925 8.7e-08 61.2 170 31.8
BraA02t06557Z Brassica rapa HOM05D007903 ORTHO05D009925 1.1e-07 60.8 163 33.1
TWI79G1550 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 1.1e-07 60.8 149 34.9
PGR119G1971 Punica granatum HOM05D007903 ORTHO05D009925 2.5e-07 59.7 167 35.3
Solyc04g007360.1 Solanum lycopersicum HOM05D007903 ORTHO05D009925 4.3e-07 58.9 167 32.9
FAN17G2767 Fragaria x ananassa HOM05D007903 ORTHO05D009925 9.6e-07 57.8 142 35.9
Lalb_Chr06g0165971 Lupinus albus HOM05D007903 ORTHO05D009925 9.6e-07 57.8 179 36.3
CANSAT01G0431 Cannabis sativa HOM05D007903 ORTHO05D009925 3.7e-06 55.8 186 34.4


User provided reference genes

Program Settings