Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc65.138 Carica papaya HOM05D012482 ORTHO05D016197 5.8e-86 320.9 162 100.0
Hma1.2p1_0292F.1_g115520 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.3e-16 90.5 77 55.8
CSS0046833 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.8e-16 89.4 76 60.5
Sabra09G0024400 Salix brachista HOM05D000002 ORTHO05D000047 6.3e-16 88.2 90 52.2
Sabra12G0039500 Salix brachista HOM05D000002 ORTHO05D000047 3.1e-15 85.9 95 49.5
Sabra16G0314700 Salix brachista HOM05D000002 ORTHO05D000047 7.0e-15 84.7 59 66.1
Sabra17G0041500 Salix brachista HOM05D000002 ORTHO05D000047 7.0e-15 84.7 59 66.1
Sabra08G0045900 Salix brachista HOM05D000002 ORTHO05D000047 5.9e-14 81.6 65 61.5
SEGI_01318 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.0e-13 80.9 84 51.2
SEGI_08785 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.2e-13 79.7 84 50.0
SEGI_38276 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.2e-13 79.7 84 50.0
Hma1.2p1_1591F.1_g292490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.9e-13 79.3 106 47.2
Sabra09G0110300 Salix brachista HOM05D000002 ORTHO05D000047 3.8e-13 79.0 41 80.5
SEGI_08695 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.1e-12 77.4 84 50.0
SEGI_27781 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.1e-12 77.4 84 50.0
CSS0038553 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-12 77.0 75 54.7
SEGI_21402 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.5e-12 77.0 84 48.8
Hma1.2p1_0915F.1_g236310 Hydrangea macrophylla HOM05D001900 ORTHO05D009822 2.5e-12 76.3 77 49.4
TWI12G0032 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 2.5e-12 76.3 62 56.5
CSS0002046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.1e-11 73.2 60 60.0
CSS0017142 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.1e-11 73.2 60 60.0
Sabra16G0272300 Salix brachista HOM05D000002 ORTHO05D000047 2.1e-11 73.2 66 51.5
Cpa.g.sc57.11 Carica papaya HOM05D000002 ORTHO05D000047 2.7e-11 72.8 84 52.4
arahy.Tifrunner.gnm1.ann1.P3W6IN Arachis hypogaea HOM05D000002 ORTHO05D000047 6.1e-11 71.6 63 54.0
Lalb_Chr24g0400161 Lupinus albus HOM05D000002 ORTHO05D000047 4.0e-10 68.9 60 51.7
arahy.Tifrunner.gnm1.ann1.S2CMM5 Arachis hypogaea HOM05D000002 ORTHO05D000047 1.5e-09 67.0 79 41.8
CSS0020126 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.6e-09 66.2 71 49.3
CANSAT78G0804 Cannabis sativa HOM05D000002 ORTHO05D000047 2.2e-08 63.2 58 50.0
SGA_v2.0_scaffold66G22442 Striga asiatica HOM05D012482 ORTHO05D016197 4.9e-08 62.0 39 71.8
Sabra11G0023800 Salix brachista HOM05D000002 ORTHO05D000047 1.1e-07 60.8 57 49.1
Hma1.2p1_0281F.1_g113200 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-07 60.1 88 37.5
Rhsim07G0041000 Rhododendron simsii HOM05D000432 ORTHO05D000320 1.8e-07 60.1 75 44.0
Sabra05G0034800 Salix brachista HOM05D000002 ORTHO05D000047 2.4e-07 59.7 57 47.4
Sabra09G0051700 Salix brachista HOM05D000002 ORTHO05D000047 2.4e-07 59.7 57 47.4
Sabra10G0088600 Salix brachista HOM05D000002 ORTHO05D000047 2.4e-07 59.7 57 47.4
Hma1.2p1_0253F.1_g102890 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.1e-07 58.9 201 23.9
QL05p076832 Quercus lobata HOM05D000002 ORTHO05D000001 5.4e-07 58.5 93 35.5
Hma1.2p1_0017F.1_g011450 Hydrangea macrophylla HOM05D000149 ORTHO05D000047 9.2e-07 57.8 72 38.9
Hma1.2p1_1430F.1_g282970 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-06 57.4 61 45.9
CSS0021782 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.5e-06 55.8 38 52.6
CSS0049957 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.5e-06 55.8 43 48.8
RhsimUnG0047900 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.5e-06 55.5 85 37.6
Sabra17G0052200 Salix brachista HOM05D003029 ORTHO05D003413 4.5e-06 55.5 71 39.4
QL03p016803 Quercus lobata HOM05D000002 ORTHO05D000047 5.9e-06 55.1 75 41.3
Sabra16G0094000 Salix brachista HOM05D000179 ORTHO05D000107 7.7e-06 54.7 75 41.3


User provided reference genes

Program Settings