Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc64.96 Carica papaya HOM05D003910 ORTHO05D004622 4.7e-244 847.4 431 100.0
THA.LOC104813147 Tarenaya hassleriana HOM05D003910 ORTHO05D004622 1.5e-210 736.1 432 87.7
Thecc.08G127500 Theobroma cacao HOM05D003910 ORTHO05D004622 1.4e-208 729.6 431 87.0
COL.COLO4_24698 Corchorus olitorius HOM05D003910 ORTHO05D004622 4.2e-208 728.0 431 86.1
Gohir.D05G237801 Gossypium hirsutum HOM05D003910 ORTHO05D004622 5.5e-208 727.6 431 86.3
Gorai.009G246200 Gossypium raimondii HOM05D003910 ORTHO05D004622 5.5e-208 727.6 431 86.3
Haze_17499 Corylus avellana HOM05D003910 ORTHO05D004622 4.6e-207 724.5 431 83.1
Cfa018581 Carpinus fangiana HOM05D003910 ORTHO05D004622 1.8e-206 722.6 433 83.4
Gohir.A05G235500 Gossypium hirsutum HOM05D003910 ORTHO05D004622 2.3e-206 722.2 431 85.6
Sp5g24850 Schrenkiella parvula HOM05D003910 ORTHO05D004622 3.9e-206 721.5 431 84.0
AL2G28910 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 1.9e-205 719.2 432 83.3
Thhalv10018595m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 3.3e-205 718.4 435 84.4
Sabra05G0135000 Salix brachista HOM05D003910 ORTHO05D004622 1.6e-204 716.1 435 83.4
Carub.0002s1641 Capsella rubella HOM05D003910 ORTHO05D004622 2.2e-204 715.7 432 85.0
AT1G69740 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 3.1e-203 711.8 432 82.4
CARHR062800 Cardamine hirsuta HOM05D003910 ORTHO05D004622 9.0e-203 710.3 432 84.0
PGR044G2730 Punica granatum HOM05D003910 ORTHO05D004622 2.6e-202 708.8 433 84.3
Aa31LG11G8660 Aethionema arabicum HOM05D003910 ORTHO05D004622 7.7e-202 707.2 429 83.2
Dinv07208 Davidia involucrata HOM05D003910 ORTHO05D004622 7.7e-202 707.2 433 82.9
Duzib041G0414 Durio zibethinus HOM05D003910 ORTHO05D004622 1.3e-201 706.4 431 84.2
CSS0022256 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 2.2e-201 705.7 446 79.6
HanXRQChr17g0559761 Helianthus annuus HOM05D003910 ORTHO05D004622 3.8e-201 704.9 429 83.4
CANSAT25G1111 Cannabis sativa HOM05D003910 ORTHO05D004622 1.4e-200 703.0 428 83.2
CiPaw.16G066200 Carya illinoinensis HOM05D003910 ORTHO05D004622 1.9e-200 702.6 431 81.0
BcaB03g14749 Brassica carinata HOM05D003910 ORTHO05D004622 5.5e-200 701.0 431 82.8
BolC6t39425H Brassica oleracea HOM05D003910 ORTHO05D004622 7.2e-200 700.7 431 82.4
C06p43500 Brassica napus HOM05D003910 ORTHO05D004622 9.4e-200 700.3 431 82.4
Manes.18G078475 Manihot esculenta HOM05D003910 ORTHO05D004622 1.6e-199 699.5 432 83.6
BcaC08g46419 Brassica carinata HOM05D003910 ORTHO05D004622 2.7e-199 698.7 431 82.1
Potri.002G082300 Populus trichocarpa HOM05D003910 ORTHO05D004622 2.7e-199 698.7 435 83.7
Manes.02G164600 Manihot esculenta HOM05D003910 ORTHO05D004622 7.9e-199 697.2 433 83.1
Rhsim05G0148200 Rhododendron simsii HOM05D003910 ORTHO05D004622 3.0e-198 695.3 429 82.1
A07p36130 Brassica napus HOM05D003910 ORTHO05D004622 6.7e-198 694.1 433 82.4
Atru.chr13.1495 Acer truncatum HOM05D003910 ORTHO05D004622 1.1e-197 693.3 455 80.7
BraA07t31189Z Brassica rapa HOM05D003910 ORTHO05D004622 1.1e-197 693.3 431 83.1
Dinv27301 Davidia involucrata HOM05D003910 ORTHO05D004622 2.5e-197 692.2 382 89.3
Lsat_1_v5_gn_8_141520 Lactuca sativa HOM05D003910 ORTHO05D004622 2.5e-197 692.2 426 82.4
Sabra02G0064500 Salix brachista HOM05D003910 ORTHO05D004622 9.7e-197 690.3 435 83.0
TAR629G0788 Trochodendron aralioides HOM05D003910 ORTHO05D004622 9.7e-197 690.3 434 82.3
Solyc08g069030.4 Solanum lycopersicum HOM05D003910 ORTHO05D004622 1.3e-196 689.9 436 80.5
Sopen08g022680 Solanum pennellii HOM05D003910 ORTHO05D004622 1.3e-196 689.9 436 82.1
PGSC0003DMG400029545 Solanum tuberosum HOM05D003910 ORTHO05D004622 2.2e-196 689.1 436 80.3
Ciclev10001195m.g Citrus clementina HOM05D003910 ORTHO05D004622 1.1e-195 686.8 438 81.3
Nn4g23592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.4e-195 686.4 431 80.3
QL09p034136 Quercus lobata HOM05D003910 ORTHO05D004622 1.8e-195 686.0 430 81.4
GSVIVG01008851001 Vitis vinifera HOM05D003910 ORTHO05D004622 2.4e-195 685.6 431 81.9
Duzib116G0657 Durio zibethinus HOM05D003910 ORTHO05D004622 3.1e-195 685.3 427 83.1
MELO3C008086.2 Cucumis melo HOM05D003910 ORTHO05D004622 4.5e-194 681.4 431 81.2
CAN.G908.4 Capsicum annuum HOM05D003910 ORTHO05D004622 5.9e-194 681.0 436 79.1
MSTRG.25378 Avicennia marina HOM05D003910 ORTHO05D004622 2.9e-193 678.7 412 83.7
CsaV3_2G033150 Cucumis sativus L. HOM05D003910 ORTHO05D004622 6.5e-193 677.6 431 81.0
Lj7A342T56 Lonicera japonica HOM05D003910 ORTHO05D004622 8.5e-193 677.2 372 91.1
Prupe.1G494300 Prunus persica HOM05D003910 ORTHO05D004622 1.1e-192 676.8 431 81.7
ECA233G1142 Erigeron canadensis HOM05D003910 ORTHO05D004622 1.4e-192 676.4 420 82.6
MD15G1346700 Malus domestica HOM05D003910 ORTHO05D004622 3.2e-192 675.2 433 81.5
Nitab4.5_0000502g0120 Nicotiana tabacum HOM05D003910 ORTHO05D004622 1.6e-191 672.9 432 80.8
SGA_v2.0_scaffold52G18960 Striga asiatica HOM05D003910 ORTHO05D004622 1.6e-191 672.9 442 79.0
TWI60G1334 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 3.6e-191 671.8 435 80.7
TWI32G0928 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 4.7e-191 671.4 442 79.4
ClCG11G008960 Citrullus lanatus HOM05D003910 ORTHO05D004622 1.0e-190 670.2 429 80.7
MD08G1161600 Malus domestica HOM05D003910 ORTHO05D004622 3.9e-190 668.3 433 80.8
Cc08_g06800 Coffea canephora HOM05D003910 ORTHO05D004622 5.1e-190 667.9 405 84.7
Nitab4.5_0005516g0010 Nicotiana tabacum HOM05D003910 ORTHO05D004622 1.5e-189 666.4 436 78.9
Sed0003239 Sechium edule HOM05D003910 ORTHO05D004622 2.6e-189 665.6 429 80.0
PSO384G4520 Papaver somniferum HOM05D003910 ORTHO05D004622 3.3e-189 665.2 435 79.1
PSO339G3693 Papaver somniferum HOM05D003910 ORTHO05D004622 4.4e-189 664.8 435 79.1
Oeu028562.1 Olea europaea HOM05D003910 ORTHO05D004622 7.4e-189 664.1 412 83.3
AUR62014326 Chenopodium quinoa HOM05D003910 ORTHO05D004622 1.7e-188 662.9 442 79.0
SalBow7G1186 Salvia bowleyana HOM05D003910 ORTHO05D004622 2.4e-187 659.1 438 77.9
Eucgr.F03796 Eucalyptus grandis HOM05D003910 ORTHO05D004622 3.1e-187 658.7 432 80.1
AUR62019066 Chenopodium quinoa HOM05D003910 ORTHO05D004622 7.0e-187 657.5 441 78.0
Glyma.04G247700 Glycine max HOM05D003910 ORTHO05D004622 1.5e-186 656.4 433 80.1
Lalb_Chr11g0066041 Lupinus albus HOM05D003910 ORTHO05D004622 2.0e-186 656.0 433 79.0
Lalb_Chr08g0241321 Lupinus albus HOM05D003910 ORTHO05D004622 3.5e-186 655.2 433 79.7
CDE10G0179 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 1.7e-185 652.9 433 76.4
Ah.15g093760 Amaranthus hybridus HOM05D003910 ORTHO05D004622 6.5e-185 651.0 460 74.3
DCAR_016682 Daucus carota HOM05D003910 ORTHO05D004622 6.5e-185 651.0 370 88.1
Medtr3g088610 Medicago truncatula HOM05D003910 ORTHO05D004622 8.5e-185 650.6 430 78.6
Migut.C01121 Erythranthe guttata HOM05D003910 ORTHO05D004622 1.4e-184 649.8 414 81.4
Phvul.009G127100 Phaseolus vulgaris HOM05D003910 ORTHO05D004622 1.2e-183 646.7 432 78.7
EL10Ac1g01030 Beta vulgaris HOM05D003910 ORTHO05D004622 1.6e-183 646.4 459 75.8
VMungo1309G0189 Vigna mungo HOM05D003910 ORTHO05D004622 2.7e-183 645.6 433 79.4
Lj1g0017187 Lotus japonicus HOM05D003910 ORTHO05D004622 1.5e-181 639.8 432 77.8
FAN15G2864 Fragaria x ananassa HOM05D003910 ORTHO05D004622 2.2e-180 636.0 431 76.8
FAN20G2211 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.8e-179 632.9 431 78.0
Aqoxy3G03785 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 9.1e-179 630.6 433 76.4
FAN27G3176 Fragaria x ananassa HOM05D003910 ORTHO05D004622 9.1e-179 630.6 431 77.5
RcHm_v2.0_Chr6g0296081 Rosa chinensis HOM05D003910 ORTHO05D004622 9.1e-179 630.6 431 77.7
FvH4_2g27170 Fragaria vesca HOM05D003910 ORTHO05D004622 2.6e-178 629.0 429 77.4
FAN24G0257 Fragaria x ananassa HOM05D003910 ORTHO05D004622 2.6e-178 629.0 429 77.4
Ca_16573_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 3.8e-177 625.2 419 78.5
Ca_29570_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 5.0e-177 624.8 418 78.5
Hma1.2p1_0129F.1_g060300 Hydrangea macrophylla HOM05D003910 ORTHO05D004622 1.2e-175 620.2 402 79.9
Os06g0704600 Oryza sativa ssp. japonica HOM05D003910 ORTHO05D004622 6.1e-175 617.8 430 74.4
TPR.G16047 Trifolium pratense HOM05D003910 ORTHO05D004622 8.0e-175 617.5 408 78.7
unitig_46.g18101 Utricularia gibba HOM05D003910 ORTHO05D004622 3.0e-174 615.5 336 88.1
Psat5g087720 Pisum sativum HOM05D003910 ORTHO05D004622 2.6e-173 612.5 328 90.2
Zm00001eb227310 Zea mays HOM05D003910 ORTHO05D004622 3.3e-173 612.1 363 83.2
arahy.Tifrunner.gnm1.ann1.LMC2LS Arachis hypogaea HOM05D003910 ORTHO05D004622 2.8e-172 609.0 440 74.1
arahy.Tifrunner.gnm1.ann1.YMC104 Arachis hypogaea HOM05D003910 ORTHO05D004622 2.8e-172 609.0 440 74.1
ATR0691G248 Amborella trichopoda HOM05D003910 ORTHO05D004622 1.1e-171 607.1 431 72.4
Peaxi162Scf00288g00822 Petunia axillaris HOM05D003910 ORTHO05D004622 1.6e-170 603.2 436 74.3
HPP92_019462 Vanilla planifolia HOM05D003910 ORTHO05D004622 1.9e-168 596.3 422 72.5
AagrBONN_evm.TU.Sc2ySwM_117.3949 Anthoceros agrestis HOM05D003910 ORTHO05D004622 1.8e-166 589.7 413 72.4
Aqoxy6G02874 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 6.8e-166 587.8 431 70.5
SHI34070 Sapria himalayana HOM05D003910 ORTHO05D004622 1.5e-165 586.6 399 73.4
SMO147G0120 Selaginella moellendorffii HOM05D003910 ORTHO05D004622 1.3e-164 583.6 403 71.5
Oeu059440.1 Olea europaea HOM05D003910 ORTHO05D004622 1.4e-163 580.1 382 79.8
MBI14_g37526_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 2.4e-163 579.3 431 70.5
Pp3c4_13690 Physcomitrium patens HOM05D003910 ORTHO05D004622 1.2e-162 577.0 369 75.9
MBI14_g21210_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 2.7e-162 575.9 315 88.3
Mapoly0065s0095 Marchantia polymorpha HOM05D003910 ORTHO05D004622 3.8e-161 572.0 363 76.9
Pp3c12_10600 Physcomitrium patens HOM05D003910 ORTHO05D004622 3.8e-161 572.0 392 72.2
CDE10G1335 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 7.3e-152 541.2 366 75.4
CARHR035900 Cardamine hirsuta HOM05D003910 ORTHO05D004622 1.0e-150 537.3 429 65.7
Actinidia29473 Actinidia chinensis HOM05D003910 ORTHO05D004622 2.0e-149 533.1 373 77.5
Thhalv10012213m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 1.1e-147 527.3 433 62.6
PSO063G2338 Papaver somniferum HOM05D003910 ORTHO05D004622 4.6e-146 521.9 283 90.5
AT1G44318 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 1.7e-145 520.0 431 63.1
Carub.0001s3515 Capsella rubella HOM05D003910 ORTHO05D004622 2.3e-145 519.6 434 62.7
AL1G52270 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 1.1e-144 517.3 431 63.3
SEGI_23261 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 4.3e-144 515.4 381 69.6
Sp1g33510 Schrenkiella parvula HOM05D003910 ORTHO05D004622 8.0e-143 511.1 440 62.5
BcaB07g33952 Brassica carinata HOM05D003910 ORTHO05D004622 1.4e-142 510.4 433 61.9
BolC6t35193H Brassica oleracea HOM05D003910 ORTHO05D004622 1.4e-142 510.4 431 62.2
BcaC08g42844 Brassica carinata HOM05D003910 ORTHO05D004622 1.2e-141 507.3 431 61.9
C06p00600 Brassica napus HOM05D003910 ORTHO05D004622 1.2e-141 507.3 431 61.9
Sc16g0000040 Simmondsia chinensis HOM05D003910 ORTHO05D004622 1.7e-140 503.4 351 76.4
BraSC36t46049Z Brassica rapa HOM05D003910 ORTHO05D004622 1.4e-139 500.4 433 61.2
A10p07550 Brassica napus HOM05D003910 ORTHO05D004622 9.2e-139 497.7 433 60.7
Glyma.06G115000 Glycine max HOM05D003910 ORTHO05D004622 7.5e-133 478.0 335 73.7
TPR.G35178 Trifolium pratense HOM05D003910 ORTHO05D004622 6.6e-129 464.9 443 60.3
PSO782G2793 Papaver somniferum HOM05D003910 ORTHO05D004622 2.2e-124 449.9 317 72.9
Cre02.g091050 Chlamydomonas reinhardtii HOM05D003910 ORTHO05D004622 7.1e-123 444.9 344 62.8
MCO01G126 Micromonas commoda HOM05D003910 ORTHO05D004622 1.7e-121 440.3 368 59.8
CSS0027293 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 8.1e-119 431.4 351 67.2
SGA_v2.0_scaffold24G10456 Striga asiatica HOM05D003910 ORTHO05D004622 5.8e-117 425.2 327 70.0
PRCOL_00003407 Prasinoderma coloniale HOM05D003910 ORTHO05D004622 7.1e-115 418.3 312 67.3
Aa31LG6G9390 Aethionema arabicum HOM05D003910 ORTHO05D004622 3.5e-114 416.0 282 73.8
Atru.chr12.1381 Acer truncatum HOM05D003910 ORTHO05D004622 1.7e-108 397.1 224 88.4
Psat4g053280 Pisum sativum HOM05D003910 ORTHO05D004622 9.7e-88 328.2 234 72.2
Aa31sc95G130 Aethionema arabicum HOM05D003910 ORTHO05D004622 4.1e-78 296.2 234 68.4
Actinidia03462 Actinidia chinensis HOM05D003910 ORTHO05D004622 1.4e-73 281.2 192 74.5
CBR_g49534 Chara braunii HOM05D003910 ORTHO05D000048 2.9e-68 263.5 253 56.5
Nn3g17592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 3.3e-64 250.0 297 49.8
Haze_27031 Corylus avellana HOM05D003910 ORTHO05D004622 6.3e-63 245.7 286 49.0
arahy.Tifrunner.gnm1.ann1.875P1G Arachis hypogaea HOM05D003910 ORTHO05D004622 6.5e-60 235.7 182 63.7
arahy.Tifrunner.gnm1.ann1.YZW1CW Arachis hypogaea HOM05D003910 ORTHO05D004622 5.2e-57 226.1 182 61.5
Psat0s476g0040 Pisum sativum HOM05D003910 ORTHO05D004622 5.7e-56 222.6 153 69.9
Cfa022049 Carpinus fangiana HOM05D003910 ORTHO05D004622 1.2e-50 204.9 311 39.9
arahy.Tifrunner.gnm1.ann1.I497ZX Arachis hypogaea HOM05D003910 ORTHO05D004622 2.7e-50 203.8 178 57.3
arahy.Tifrunner.gnm1.ann1.MAXD3F Arachis hypogaea HOM05D003910 ORTHO05D004622 2.3e-49 200.7 172 59.3
Aa31sc107G70 Aethionema arabicum HOM05D003910 ORTHO05D004622 3.7e-47 193.4 148 70.3
arahy.Tifrunner.gnm1.ann1.FDSF2K Arachis hypogaea HOM05D003910 ORTHO05D004622 2.7e-45 187.2 171 62.0
BcaB06g27098 Brassica carinata HOM05D003910 ORTHO05D004622 3.5e-45 186.8 101 85.1
BcaB05g22163 Brassica carinata HOM05D003910 ORTHO05D004622 9.5e-43 178.7 101 81.2
Nn4g23594 Nelumbo nucifera HOM05D003910 ORTHO05D004622 9.5e-43 178.7 100 88.0
arahy.Tifrunner.gnm1.ann1.KLV74S Arachis hypogaea HOM05D003910 ORTHO05D004622 2.1e-42 177.6 178 53.9
Psat4g053240 Pisum sativum HOM05D003910 ORTHO05D004622 3.0e-41 173.7 104 80.8
BcaB04g19319 Brassica carinata HOM05D003910 ORTHO05D004622 8.3e-39 165.6 111 72.1
Oeu059446.1 Olea europaea HOM05D003910 ORTHO05D004622 5.6e-35 152.9 77 88.3
Haze_27000 Corylus avellana HOM05D003910 ORTHO05D004622 9.5e-35 152.1 212 39.6
TAR622G0657 Trochodendron aralioides HOM05D003910 ORTHO05D004622 1.6e-34 151.4 135 63.0
TPR.G20499 Trifolium pratense HOM05D003910 ORTHO05D004622 4.7e-34 149.8 122 65.6
SpUn0247_0040 Schrenkiella parvula HOM05D003910 ORTHO05D004622 8.9e-33 145.6 76 85.5
Actinidia03463 Actinidia chinensis HOM05D003910 ORTHO05D004622 4.3e-27 126.7 72 87.5
TAR371G0308 Trochodendron aralioides HOM05D003910 ORTHO05D004622 2.6e-24 117.5 74 79.7
arahy.Tifrunner.gnm1.ann1.ZWJ939 Arachis hypogaea HOM05D000074 ORTHO05D004622 3.2e-22 110.5 181 39.8
Lsat_1_v5_gn_8_139480 Lactuca sativa HOM05D003910 ORTHO05D004420 1.1e-19 102.1 106 54.7
Sp6g37550 Schrenkiella parvula HOM05D003910 ORTHO05D004622 1.7e-15 88.2 90 51.1
Aa31sc107G60 Aethionema arabicum HOM05D003910 ORTHO05D059684 6.4e-15 86.3 49 87.8
Psat1g078960 Pisum sativum HOM05D003910 ORTHO05D004622 1.1e-14 85.5 77 58.4
Psat1g079000 Pisum sativum HOM05D003910 ORTHO05D004622 1.1e-14 85.5 77 58.4
SEGI_40510 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 1.1e-11 75.5 53 66.0
ECA233G3734 Erigeron canadensis HOM05D005443 ORTHO05D009021 2.4e-09 67.8 97 52.6
Nn3g17591 Nelumbo nucifera HOM05D003910 ORTHO05D004622 4.0e-09 67.0 36 88.9
Lsat_1_v5_gn_8_143861 Lactuca sativa HOM05D003910 ORTHO05D004622 4.4e-08 63.5 59 59.3
arahy.Tifrunner.gnm1.ann1.LHV34C Arachis hypogaea HOM05D003910 ORTHO05D004622 2.4e-06 57.8 66 50.0


User provided reference genes

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