Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc64.50 Carica papaya HOM05D007217 ORTHO05D009092 1.5e-62 242.7 124 100.0
THA.LOC104808222 Tarenaya hassleriana HOM05D007217 ORTHO05D009092 6.1e-35 151.0 125 60.0
Atru.chr10.619 Acer truncatum HOM05D007217 ORTHO05D009092 3.0e-34 148.7 123 60.2
GSVIVG01019606001 Vitis vinifera HOM05D007217 ORTHO05D009092 3.9e-34 148.3 121 58.7
CiPaw.10G112300 Carya illinoinensis HOM05D007217 ORTHO05D009092 5.1e-34 147.9 123 60.2
QL05p062902 Quercus lobata HOM05D007217 ORTHO05D009092 5.7e-33 144.4 122 61.5
TWI09G0397 Tripterygium wilfordii HOM05D007217 ORTHO05D009092 9.7e-33 143.7 123 59.3
RcHm_v2.0_Chr5g0019241 Rosa chinensis HOM05D007217 ORTHO05D009092 2.2e-32 142.5 116 62.9
TWI09G0788 Tripterygium wilfordii HOM05D007217 ORTHO05D009092 3.7e-32 141.7 123 58.5
CsaV3_3G030060 Cucumis sativus L. HOM05D007217 ORTHO05D009092 4.8e-32 141.4 123 58.5
Ciclev10029535m.g Citrus clementina HOM05D007217 ORTHO05D009092 6.3e-32 141.0 115 60.9
Rhsim02G0191400 Rhododendron simsii HOM05D007217 ORTHO05D009092 6.3e-32 141.0 115 61.7
ClCG07G002120 Citrullus lanatus HOM05D007217 ORTHO05D009092 8.2e-32 140.6 123 57.7
Prupe.4G105800 Prunus persica HOM05D007217 ORTHO05D009092 8.2e-32 140.6 120 60.0
Ciclev10018165m.g Citrus clementina HOM05D007217 ORTHO05D009092 1.1e-31 140.2 118 59.3
Rhsim09G0182200 Rhododendron simsii HOM05D007217 ORTHO05D009092 1.1e-31 140.2 115 61.7
MELO3C015565.2 Cucumis melo HOM05D007217 ORTHO05D009092 9.1e-31 137.1 123 55.3
Duzib235G1460 Durio zibethinus HOM05D007217 ORTHO05D009092 2.6e-30 135.6 113 60.2
Thecc.06G135800 Theobroma cacao HOM05D007217 ORTHO05D009092 5.9e-30 134.4 116 57.8
CsaV3_4G011770 Cucumis sativus L. HOM05D007217 ORTHO05D009092 7.7e-30 134.0 123 54.5
Sed0002565 Sechium edule HOM05D007217 ORTHO05D009092 1.3e-29 133.3 123 53.7
MELO3C022720.2 Cucumis melo HOM05D007217 ORTHO05D009092 2.2e-29 132.5 123 54.5
FvH4_3g11820 Fragaria vesca HOM05D007217 ORTHO05D009092 3.8e-29 131.7 116 59.5
Gohir.D06G146500 Gossypium hirsutum HOM05D007217 ORTHO05D009092 5.0e-29 131.3 121 55.4
Gohir.A06G140100 Gossypium hirsutum HOM05D007217 ORTHO05D009092 6.5e-29 131.0 121 55.4
Gorai.010G170900 Gossypium raimondii HOM05D007217 ORTHO05D009092 8.5e-29 130.6 121 55.4
Manes.02G204000 Manihot esculenta HOM05D007217 ORTHO05D009092 2.5e-28 129.0 123 51.2
MD05G1258900 Malus domestica HOM05D007217 ORTHO05D009092 4.2e-28 128.3 120 55.8
MD10G1238500 Malus domestica HOM05D007217 ORTHO05D009092 4.2e-28 128.3 123 56.1
Rhsim04G0112200 Rhododendron simsii HOM05D007217 ORTHO05D009092 3.6e-27 125.2 146 49.3
Dinv20263 Davidia involucrata HOM05D007217 ORTHO05D009092 6.1e-27 124.4 115 53.9
Eucgr.E04359 Eucalyptus grandis HOM05D007217 ORTHO05D009092 1.4e-26 123.2 116 52.6
Rhsim05G0134700 Rhododendron simsii HOM05D007217 ORTHO05D009092 1.4e-26 123.2 104 58.7
AT1G80245 Arabidopsis thaliana HOM05D007217 ORTHO05D009092 4.0e-26 121.7 125 48.8
Potri.003G149100 Populus trichocarpa HOM05D007217 ORTHO05D009092 6.7e-26 120.9 124 53.2
Eucgr.E02022 Eucalyptus grandis HOM05D007217 ORTHO05D009092 8.8e-26 120.6 116 50.9
Dinv01436 Davidia involucrata HOM05D007217 ORTHO05D009092 1.1e-25 120.2 89 64.0
Nn7g37971 Nelumbo nucifera HOM05D007217 ORTHO05D009092 1.1e-25 120.2 118 54.2
Aa31LG4G550 Aethionema arabicum HOM05D002649 ORTHO05D002838 3.3e-25 118.6 126 50.0
DCAR_001337 Daucus carota HOM05D007217 ORTHO05D009092 1.3e-24 116.7 118 56.8
Sopen01g003160 Solanum pennellii HOM05D007217 ORTHO05D009092 1.3e-24 116.7 122 50.0
PGSC0003DMG400021318 Solanum tuberosum HOM05D007217 ORTHO05D009092 1.3e-24 116.7 122 49.2
Sabra01G0058500 Salix brachista HOM05D007217 ORTHO05D009092 2.2e-24 115.9 123 50.4
Sp5g35560 Schrenkiella parvula HOM05D007217 ORTHO05D009092 2.2e-24 115.9 119 47.1
AL2G41250 Arabidopsis lyrata HOM05D007217 ORTHO05D009092 3.7e-24 115.2 125 47.2
FAN21G1503 Fragaria x ananassa HOM05D007217 ORTHO05D009092 3.7e-24 115.2 116 56.9
Sp1g21760 Schrenkiella parvula HOM05D007217 ORTHO05D009092 4.8e-24 114.8 124 47.6
Solyc01g007180.3 Solanum lycopersicum HOM05D007217 ORTHO05D009092 6.3e-24 114.4 122 49.2
Lj5g0013157 Lotus japonicus HOM05D007217 ORTHO05D009092 1.1e-23 113.6 118 49.2
Peaxi162Scf00586g00008 Petunia axillaris HOM05D007217 ORTHO05D009092 1.8e-23 112.8 122 48.4
AL7G47090 Arabidopsis lyrata HOM05D007217 ORTHO05D009092 4.1e-23 111.7 126 47.6
CARHR074240 Cardamine hirsuta HOM05D007217 ORTHO05D009092 5.3e-23 111.3 127 47.2
AT4G00695 Arabidopsis thaliana HOM05D007217 ORTHO05D009092 7.0e-23 110.9 110 50.0
Thhalv10019705m.g Eutrema salsugineum HOM05D007217 ORTHO05D009092 7.0e-23 110.9 107 49.5
GSVIVG01013634001 Vitis vinifera HOM05D007217 ORTHO05D009092 1.2e-22 110.2 96 59.4
DCAR_031675 Daucus carota HOM05D007217 ORTHO05D009092 1.6e-22 109.8 118 54.2
Carub.0007s3329 Capsella rubella HOM05D007217 ORTHO05D009092 2.0e-22 109.4 109 47.7
FAN16G2896 Fragaria x ananassa HOM05D007217 ORTHO05D009092 2.0e-22 109.4 116 55.2
Sc06g0009730 Simmondsia chinensis HOM05D007217 ORTHO05D009092 2.7e-22 109.0 90 58.9
BcaC03g15989 Brassica carinata HOM05D007217 ORTHO05D009092 3.5e-22 108.6 119 50.4
Glyma.08G176100 Glycine max HOM05D007217 ORTHO05D009092 3.5e-22 108.6 99 51.5
Lj6g0006317 Lotus japonicus HOM05D007217 ORTHO05D009092 3.5e-22 108.6 99 51.5
Oeu043290.1 Olea europaea HOM05D007217 ORTHO05D009092 5.9e-22 107.8 112 51.8
BolC2t09757H Brassica oleracea HOM05D004952 ORTHO05D006131 7.7e-22 107.5 124 47.6
Glyma.15G250400 Glycine max HOM05D007217 ORTHO05D009092 7.7e-22 107.5 118 46.6
Potri.001G081300 Populus trichocarpa HOM05D007217 ORTHO05D009092 1.3e-21 106.7 123 47.2
C02p37450 Brassica napus HOM05D004952 ORTHO05D006131 1.7e-21 106.3 109 53.2
BcaB05g25284 Brassica carinata HOM05D004952 ORTHO05D006131 2.2e-21 105.9 121 47.9
Cc01_g06080 Coffea canephora HOM05D007217 ORTHO05D009092 2.2e-21 105.9 104 48.1
EL10Ac9g22805 Beta vulgaris HOM05D007217 ORTHO05D009092 5.0e-21 104.8 101 55.4
MSTRG.12451 Avicennia marina HOM05D007217 ORTHO05D009092 6.5e-21 104.4 118 47.5
TAR722G0002 Trochodendron aralioides HOM05D007217 ORTHO05D009092 6.5e-21 104.4 125 51.2
BraA02t07362Z Brassica rapa HOM05D004952 ORTHO05D006131 8.5e-21 104.0 124 46.8
Lalb_Chr16g0392431 Lupinus albus HOM05D007217 ORTHO05D009092 3.2e-20 102.1 108 43.5
Medtr8g011490 Medicago truncatula HOM05D007217 ORTHO05D009092 3.2e-20 102.1 101 47.5
Gorai.011G051100 Gossypium raimondii HOM05D007217 ORTHO05D009092 5.5e-20 101.3 111 51.4
MBI18_g37406_MAGBIO Magnolia biondii HOM05D007217 ORTHO05D009092 2.7e-19 99.0 104 50.0
Phvul.008G108200 Phaseolus vulgaris HOM05D007217 ORTHO05D009092 2.7e-19 99.0 96 50.0
VMungo1383G0797 Vigna mungo HOM05D007217 ORTHO05D009092 2.7e-19 99.0 96 49.0
Gohir.D10G048000 Gossypium hirsutum HOM05D007217 ORTHO05D009092 1.4e-18 96.7 111 49.5
Psat0s5329g0080 Pisum sativum HOM05D007217 ORTHO05D009092 3.0e-18 95.5 103 42.7
SGA_v2.0_scaffold3G01474 Striga asiatica HOM05D007217 ORTHO05D009092 5.2e-18 94.7 120 42.5
arahy.Tifrunner.gnm1.ann1.TIKV1F Arachis hypogaea HOM05D007217 ORTHO05D009092 6.8e-18 94.4 102 48.0
Gohir.A10G046700 Gossypium hirsutum HOM05D007217 ORTHO05D009092 6.8e-18 94.4 83 56.6
arahy.Tifrunner.gnm1.ann1.3NP1QY Arachis hypogaea HOM05D007217 ORTHO05D009092 1.2e-17 93.6 102 48.0
arahy.Tifrunner.gnm1.ann1.Z0SJI2 Arachis hypogaea HOM05D007217 ORTHO05D009092 1.2e-17 93.6 102 46.1
AUR62017567 Chenopodium quinoa HOM05D007217 ORTHO05D009092 1.5e-17 93.2 136 41.9
SalBow8G5173 Salvia bowleyana HOM05D007217 ORTHO05D009092 1.5e-17 93.2 120 42.5
Migut.N02356 Erythranthe guttata HOM05D007217 ORTHO05D009092 9.8e-17 90.5 104 44.2
unitig_749.g13716 Utricularia gibba HOM05D007217 ORTHO05D009092 1.3e-16 90.1 118 43.2
A02p23690 Brassica napus HOM05D004952 ORTHO05D006131 6.3e-16 87.8 139 40.3
Hma1.2p1_0074F.1_g039010 Hydrangea macrophylla HOM05D007217 ORTHO05D009092 9.1e-15 84.0 93 49.5
COL.COLO4_30930 Corchorus olitorius HOM05D007217 ORTHO05D009092 1.6e-14 83.2 59 69.5
Lsat_1_v5_gn_4_36120 Lactuca sativa HOM05D007217 ORTHO05D009092 2.7e-14 82.4 115 41.7
Nitab4.5_0002858g0010 Nicotiana tabacum HOM05D007217 ORTHO05D009092 5.9e-14 81.3 93 46.2
HPP92_002517 Vanilla planifolia HOM05D007217 ORTHO05D009092 1.0e-13 80.5 80 50.0
HPP92_002534 Vanilla planifolia HOM05D007217 ORTHO05D009092 1.0e-13 80.5 80 50.0
Psat4g125640 Pisum sativum HOM05D007217 ORTHO05D009092 3.2e-12 75.5 103 37.9
C02p14430 Brassica napus HOM05D007217 ORTHO05D009092 4.2e-12 75.1 76 50.0
BolC2t07567H Brassica oleracea HOM05D007217 ORTHO05D009092 4.2e-12 75.1 76 50.0
HanXRQChr04g0107331 Helianthus annuus HOM05D007217 ORTHO05D009092 1.2e-11 73.6 132 36.4
Hund24191 Selenicereus undatus HOM05D007217 ORTHO05D009092 1.4e-10 70.1 70 51.4
Actinidia38172 Actinidia chinensis HOM05D007217 ORTHO05D009092 2.3e-10 69.3 66 53.0
Lsat_1_v5_gn_7_8820 Lactuca sativa HOM05D007217 ORTHO05D009092 2.3e-10 69.3 60 55.0
Nitab4.5_0004758g0070 Nicotiana tabacum HOM05D007217 ORTHO05D009092 1.5e-09 66.6 130 33.8
CDE03G0351 Ceratophyllum demersum HOM05D007217 ORTHO05D009092 5.7e-09 64.7 77 42.9
ATR0763G267 Amborella trichopoda HOM05D007217 ORTHO05D009092 7.5e-09 64.3 110 38.2
CDE03G0339 Ceratophyllum demersum HOM05D007217 ORTHO05D009092 7.5e-09 64.3 77 42.9
FAN25G0807 Fragaria x ananassa HOM05D000251 ORTHO05D000414 9.8e-09 63.9 88 46.6
Zm00001eb228930 Zea mays HOM05D007217 ORTHO05D009092 2.0e-06 56.2 78 39.7


User provided reference genes

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