Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc6293.1 Carica papaya HOM05D000002 ORTHO05D000047 1.8e-116 422.5 207 100.0
CSS0004984 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.6e-18 94.7 243 32.1
Cpa.g.sc1241.3 Carica papaya HOM05D000002 ORTHO05D000047 8.6e-18 94.7 57 78.9
CSS0000519 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-17 94.4 246 32.1
CSS0017883 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-17 94.0 245 30.6
CSS0008463 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.9e-17 93.6 249 29.3
CSS0029482 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-17 92.8 252 30.2
CSS0010794 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.3e-17 91.7 244 29.9
Cpa.g.sc202.10 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-16 90.9 51 74.5
Cpa.g.sc20.50 Carica papaya HOM05D000002 ORTHO05D000047 1.6e-16 90.5 51 74.5
Hma1.2p1_0164F.1_g073240 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.1e-16 90.1 240 32.1
Cpa.g.sc1639.1 Carica papaya HOM05D000002 ORTHO05D000047 3.6e-16 89.4 57 70.2
Cpa.g.sc39.49 Carica papaya HOM05D000846 ORTHO05D006755 3.6e-16 89.4 51 78.4
Cpa.g.sc31.105 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-15 87.4 51 70.6
Cpa.g.sc63.36 Carica papaya HOM05D000002 ORTHO05D000047 3.1e-15 86.3 51 76.5
Cpa.g.sc95.11 Carica papaya HOM05D002228 ORTHO05D002347 3.1e-15 86.3 51 74.5
Cpa.g.sc18.126 Carica papaya HOM05D000002 ORTHO05D000047 5.2e-15 85.5 57 64.9
Cpa.g.sc23.134 Carica papaya HOM05D000002 ORTHO05D000047 6.8e-15 85.1 58 63.8
Cpa.g.sc168.5 Carica papaya HOM05D000002 ORTHO05D000047 8.9e-15 84.7 51 74.5
Cpa.g.sc474.2 Carica papaya HOM05D000002 ORTHO05D000047 8.9e-15 84.7 51 70.6
Cpa.g.sc56.27 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-14 84.3 51 72.5
Cpa.g.sc608.3 Carica papaya HOM05D000002 ORTHO05D000047 1.5e-14 84.0 57 66.7
Cpa.g.sc67.4 Carica papaya HOM05D000002 ORTHO05D000047 1.5e-14 84.0 51 68.6
CSS0010335 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.4e-14 82.8 241 28.6
Cpa.g.sc67.42 Carica papaya HOM05D000002 ORTHO05D000047 3.4e-14 82.8 51 68.6
Cpa.g.sc86.67 Carica papaya HOM05D000002 ORTHO05D000047 4.4e-14 82.4 51 70.6
Cpa.g.sc34.189 Carica papaya HOM05D000002 ORTHO05D000047 5.8e-14 82.0 51 68.6
TWI23G0973 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 7.6e-14 81.6 192 30.7
Cpa.g.sc69.23 Carica papaya HOM05D000002 ORTHO05D000047 9.9e-14 81.3 57 66.7
Cpa.g.sc63.40 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-13 80.9 51 72.5
Cpa.g.sc15.70 Carica papaya HOM05D000002 ORTHO05D000047 1.7e-13 80.5 43 76.7
Cpa.g.sc73.41 Carica papaya HOM05D000002 ORTHO05D000047 1.7e-13 80.5 57 59.6
Cpa.g.sc67.66 Carica papaya HOM05D000002 ORTHO05D000047 2.2e-13 80.1 66 56.1
Cpa.g.sc11.108 Carica papaya HOM05D000002 ORTHO05D000047 2.9e-13 79.7 51 66.7
Cpa.g.sc272.7 Carica papaya HOM05D000002 ORTHO05D000047 2.9e-13 79.7 51 62.7
Cpa.g.sc150.60 Carica papaya HOM05D000002 ORTHO05D000047 3.8e-13 79.3 51 70.6
Cpa.g.sc25.53 Carica papaya HOM05D000002 ORTHO05D000047 3.8e-13 79.3 57 59.6
Cpa.g.sc332.6 Carica papaya HOM05D000002 ORTHO05D000047 4.9e-13 79.0 41 87.8
Cpa.g.sc44.107 Carica papaya HOM05D000002 ORTHO05D000047 6.4e-13 78.6 57 57.9
Hma1.2p1_0018F.1_g013420 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.4e-13 78.6 183 31.7
Cpa.g.sc138.9 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-12 77.8 51 66.7
Hma1.2p1_0217F.1_g091730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-12 77.4 51 62.7
Hma1.2p1_0349F.1_g132140 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-12 77.4 51 66.7
Hma1.2p1_0744F.1_g211780 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-12 77.4 51 62.7
Nn5g30897 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.9e-12 77.0 230 29.1
Hma1.2p1_3882F.1_g337890 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.4e-12 76.6 51 62.7
Cpa.g.sc19.23 Carica papaya HOM05D005926 ORTHO05D007001 3.2e-12 76.3 63 55.6
Cpa.g.sc67.87 Carica papaya HOM05D000002 ORTHO05D000047 3.2e-12 76.3 50 66.0
Hma1.2p1_1349F.1_g277350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.2e-12 76.3 51 60.8
GSVIVG01038208001 Vitis vinifera HOM05D000002 ORTHO05D000047 3.2e-12 76.3 51 62.7
Atru.chr9.342 Acer truncatum HOM05D000002 ORTHO05D000047 5.4e-12 75.5 51 58.8
Cpa.g.sc425.2 Carica papaya HOM05D000002 ORTHO05D000047 5.4e-12 75.5 50 60.0
Cpa.g.sc5.114 Carica papaya HOM05D000002 ORTHO05D000047 5.4e-12 75.5 57 57.9
CSS0033236 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-11 74.3 51 60.8
Cpa.g.sc44.34 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-11 74.3 43 72.1
Cpa.g.sc5.32 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-11 74.3 57 56.1
Ca_11532_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 1.2e-11 74.3 211 28.0
CSS0000858 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-11 73.9 51 60.8
CSS0003806 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-11 73.9 51 60.8
CSS0004509 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-11 73.9 51 60.8
CSS0005779 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-11 73.9 51 60.8
CSS0005870 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-11 73.9 51 60.8
CSS0006173 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-11 73.9 51 60.8
CSS0007796 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-11 73.9 51 60.8
CSS0008635 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-11 73.9 51 60.8
CSS0014620 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-11 73.9 51 60.8
CSS0015126 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-11 73.9 51 60.8
CSS0022055 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-11 73.9 51 60.8
CSS0024888 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-11 73.9 51 60.8
CSS0033964 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-11 73.9 51 60.8
CSS0037461 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-11 73.9 51 60.8
CSS0038170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-11 73.9 51 60.8
CSS0024170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.1e-11 73.6 51 60.8
Hma1.2p1_0079F.1_g041630 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.1e-11 73.6 156 35.3
Cpa.g.sc54.39 Carica papaya HOM05D000002 ORTHO05D000047 2.7e-11 73.2 50 60.0
CSS0004866 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.5e-11 72.8 245 28.6
CSS0017511 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.5e-11 72.8 246 29.7
Cpa.g.sc96.23 Carica papaya HOM05D000002 ORTHO05D000047 3.5e-11 72.8 51 58.8
Hma1.2p1_1841F.1_g304990 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.5e-11 72.8 51 56.9
Hma1.2p1_1513F.1_g288010 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.6e-11 72.4 199 28.1
Cpa.g.sc19.215 Carica papaya HOM05D000002 ORTHO05D000047 6.0e-11 72.0 51 60.8
Hma1.2p1_0247F.1_g101820 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.0e-11 72.0 51 58.8
Nn2g11309 Nelumbo nucifera HOM05D000002 ORTHO05D000047 6.0e-11 72.0 229 27.9
CSS0001250 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.8e-11 71.6 51 58.8
CSS0027817 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.8e-11 71.6 51 58.8
CSS0034843 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.8e-11 71.6 51 58.8
CSS0039193 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.8e-11 71.6 51 58.8
CSS0045320 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.8e-11 71.6 51 58.8
Cpa.g.sc41.73 Carica papaya HOM05D000002 ORTHO05D000047 7.8e-11 71.6 44 70.5
Atru.chr3.1979 Acer truncatum HOM05D000002 ORTHO05D000047 1.0e-10 71.2 50 60.0
CSS0050398 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.3e-10 70.9 246 28.9
CSS0011005 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.7e-10 70.5 245 28.2
CSS0032452 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.7e-10 70.5 245 28.2
CSS0038278 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.7e-10 70.5 245 28.2
CSS0041031 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.7e-10 70.5 245 28.2
CSS0048989 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.7e-10 70.5 245 28.2
Hma1.2p1_0072F.1_g038350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-10 70.5 51 58.8
Cpa.g.sc847.3 Carica papaya HOM05D000002 ORTHO05D000047 2.3e-10 70.1 42 76.2
Hma1.2p1_0232F.1_g097650 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.1e-10 68.9 136 35.3
CSS0001169 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.7e-10 68.2 51 56.9
Cpa.g.sc164.3 Carica papaya HOM05D000002 ORTHO05D000047 1.9e-09 67.0 51 62.7
Hma1.2p1_0004F.1_g004100 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-09 67.0 136 34.6
Hma1.2p1_1132F.1_g260330 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.3e-09 66.2 135 31.9
Hma1.2p1_1132F.1_g260335 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.3e-09 66.2 135 31.9
Nn7g38028 Nelumbo nucifera HOM05D000002 ORTHO05D000047 3.3e-09 66.2 50 56.0
Cpa.g.sc10.112 Carica papaya HOM05D000002 ORTHO05D000047 4.3e-09 65.9 42 69.0
Hma1.2p1_0074F.1_g038980 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.6e-09 65.5 136 32.4
Gohir.D11G265450 Gossypium hirsutum HOM05D000002 ORTHO05D000047 7.3e-09 65.1 51 52.9
Hma1.2p1_0450F.1_g155525 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.3e-09 65.1 51 52.9
Hma1.2p1_0450F.1_g155530 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.3e-09 65.1 51 52.9
Hma1.2p1_0450F.1_g155540 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.3e-09 65.1 51 52.9
Hma1.2p1_0450F.1_g155545 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.3e-09 65.1 51 52.9
Cpa.g.sc28.17 Carica papaya HOM05D000002 ORTHO05D000047 9.6e-09 64.7 42 73.8
Cpa.g.sc30.24 Carica papaya HOM05D000002 ORTHO05D000047 9.6e-09 64.7 50 56.0
Cpa.g.sc301.4 Carica papaya HOM05D000002 ORTHO05D000047 9.6e-09 64.7 40 65.0
Cpa.g.sc58.26 Carica papaya HOM05D000002 ORTHO05D000047 9.6e-09 64.7 42 66.7
Hma1.2p1_1077F.1_g254670 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.6e-09 64.7 77 42.9
Nn1g04145 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.2e-08 64.3 50 52.0
Nn5g30282 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.2e-08 64.3 50 52.0
SHI48864 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-08 64.3 238 29.4
Hma1.2p1_0121F.1_g057460 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.6e-08 62.8 127 30.7
Cpa.g.sc10.7 Carica papaya HOM05D000002 ORTHO05D000047 4.7e-08 62.4 108 43.5
Cpa.g.sc15.92 Carica papaya HOM05D001549 ORTHO05D003098 4.7e-08 62.4 40 65.0
Cpa.g.sc44.5 Carica papaya HOM05D000002 ORTHO05D000047 6.2e-08 62.0 48 58.3
Hma1.2p1_0111F.1_g053730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.1e-08 61.6 51 47.1
Hma1.2p1_0111F.1_g053735 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.1e-08 61.6 51 47.1
Hma1.2p1_0158F.1_g069853 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.1e-08 61.6 51 47.1
Hma1.2p1_0308F.1_g120095 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.1e-08 61.6 51 47.1
Hma1.2p1_0308F.1_g120101 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.1e-08 61.6 51 47.1
Hma1.2p1_0901F.1_g234740 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.1e-08 61.6 51 47.1
CSS0030944 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-07 60.8 235 26.4
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-07 60.8 219 25.1
Cpa.g.sc29.27 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-07 60.8 34 73.5
Hma1.2p1_0661F.1_g198180 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-07 60.8 51 49.0
Cpa.g.sc29.59 Carica papaya HOM05D000002 ORTHO05D000047 1.8e-07 60.5 218 26.6
Hma1.2p1_1113F.1_g258670 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-07 60.5 42 59.5
Hma1.2p1_1207F.1_g267040 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-07 60.5 51 47.1
Cpa.g.sc126.7 Carica papaya HOM05D000002 ORTHO05D000047 2.4e-07 60.1 34 70.6
Cpa.g.sc71.36 Carica papaya HOM05D000002 ORTHO05D000047 2.4e-07 60.1 40 62.5
Hma1.2p1_0172F.1_g076320 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.4e-07 60.1 51 51.0
Cpa.g.sc30.156 Carica papaya HOM05D000002 ORTHO05D000047 3.1e-07 59.7 39 66.7
Cpa.g.sc16.30 Carica papaya HOM05D000002 ORTHO05D000047 4.0e-07 59.3 38 65.8
Cpa.g.sc5.346 Carica papaya HOM05D000002 ORTHO05D000047 4.0e-07 59.3 40 62.5
Hma1.2p1_0069F.1_g037490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.3e-07 58.9 51 45.1
Hma1.2p1_0421F.1_g149900 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.3e-07 58.9 43 60.5
Hma1.2p1_0946F.1_g240310 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.3e-07 58.9 51 45.1
Cpa.g.sc36.36 Carica papaya HOM05D000002 ORTHO05D000047 6.9e-07 58.5 46 52.2
Hma1.2p1_0503F.1_g168010 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.9e-07 58.5 51 45.1
Cpa.g.sc614.1 Carica papaya HOM05D000002 ORTHO05D000047 9.0e-07 58.2 47 59.6
Hma1.2p1_0219F.1_g092870 Hydrangea macrophylla HOM05D000384 ORTHO05D000047 9.0e-07 58.2 45 57.8
Cpa.g.sc118.39 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-06 57.8 37 67.6
Cpa.g.sc232.2 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-06 57.8 35 65.7
Cpa.g.sc748.2 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-06 57.8 51 47.1
Hma1.2p1_0589F.1_g184740 Hydrangea macrophylla HOM05D004493 ORTHO05D005117 1.2e-06 57.8 51 45.1
Hma1.2p1_0183F.1_g081030 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.5e-06 57.4 164 29.3
Hma1.2p1_0172F.1_g076300 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.0e-06 57.0 51 43.1
Nn1g00812 Nelumbo nucifera HOM05D000002 ORTHO05D000047 2.0e-06 57.0 51 45.1
GSVIVG01029816001 Vitis vinifera HOM05D000168 ORTHO05D000047 2.0e-06 57.0 51 49.0
Cpa.g.sc12.50 Carica papaya HOM05D000002 ORTHO05D000047 2.6e-06 56.6 36 61.1
Cpa.g.sc21.143 Carica papaya HOM05D000002 ORTHO05D000047 2.6e-06 56.6 34 67.6
Cpa.g.sc28.123 Carica papaya HOM05D000207 ORTHO05D000047 2.6e-06 56.6 51 51.0
Cpa.g.sc43.142 Carica papaya HOM05D000002 ORTHO05D000047 2.6e-06 56.6 50 48.0
Cpa.g.sc7.46 Carica papaya HOM05D000002 ORTHO05D000047 2.6e-06 56.6 47 59.6
Cpa.g.sc159.28 Carica papaya HOM05D002488 ORTHO05D002613 3.4e-06 56.2 39 59.0
Ca_08364_v3 Cicer arietinum L. HOM05D007163 ORTHO05D009213 3.4e-06 56.2 51 49.0
TPR.G28095 Trifolium pratense HOM05D000002 ORTHO05D000001 3.4e-06 56.2 36 66.7
TPR.G9414 Trifolium pratense HOM05D005075 ORTHO05D007097 4.4e-06 55.8 51 49.0
Cpa.g.sc2.306 Carica papaya HOM05D000002 ORTHO05D000047 5.8e-06 55.5 40 57.5
Cpa.g.sc301.5 Carica papaya HOM05D000002 ORTHO05D000047 5.8e-06 55.5 55 45.5
Hma1.2p1_0526F.1_g172830 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.8e-06 55.5 172 27.3
Cpa.g.sc176.6 Carica papaya HOM05D000002 ORTHO05D000047 7.6e-06 55.1 40 52.5
Hma1.2p1_0939F.1_g239310 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.6e-06 55.1 51 41.2
Medtr1262s0010 Medicago truncatula HOM05D000002 ORTHO05D000047 7.6e-06 55.1 51 43.1
Psat6g243640 Pisum sativum HOM05D000002 ORTHO05D000047 7.6e-06 55.1 51 43.1


User provided reference genes

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