Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc628.6 Carica papaya HOM05D005752 ORTHO05D006959 1.5e-84 316.2 165 100.0
ClCG04G012440 Citrullus lanatus HOM05D005752 ORTHO05D006959 6.6e-29 131.3 174 49.4
QL12p037498 Quercus lobata HOM05D005752 ORTHO05D006959 2.8e-27 125.9 210 42.9
QL10p035764 Quercus lobata HOM05D005752 ORTHO05D006959 4.8e-27 125.2 210 42.9
Ciclev10024397m.g Citrus clementina HOM05D005752 ORTHO05D006959 1.1e-26 124.0 125 59.2
PGR083G1308 Punica granatum HOM05D005752 ORTHO05D006959 1.2e-25 120.6 160 52.5
TAR636G2449 Trochodendron aralioides HOM05D005752 ORTHO05D006959 4.5e-25 118.6 159 50.3
Atru.chr9.27 Acer truncatum HOM05D005752 ORTHO05D006959 5.8e-25 118.2 157 51.6
Sed0024837 Sechium edule HOM05D005752 ORTHO05D006959 5.8e-25 118.2 161 49.7
GSVIVG01024240001 Vitis vinifera HOM05D005752 ORTHO05D006959 7.6e-25 117.9 120 62.5
Gohir.A07G062900 Gossypium hirsutum HOM05D005752 ORTHO05D006959 1.7e-24 116.7 162 48.1
CiPaw.15G108100 Carya illinoinensis HOM05D005752 ORTHO05D006959 2.2e-24 116.3 161 50.9
TAR472G0004 Trochodendron aralioides HOM05D005752 ORTHO05D006959 4.9e-24 115.2 162 50.0
TWI81G0144 Tripterygium wilfordii HOM05D005752 ORTHO05D006959 8.4e-24 114.4 176 47.2
Aqoxy3G04339 Aquilegia oxysepala HOM05D005752 ORTHO05D006959 1.1e-23 114.0 159 50.3
Manes.15G187700 Manihot esculenta HOM05D005752 ORTHO05D006959 1.9e-23 113.2 158 48.7
Thecc.03G073300 Theobroma cacao HOM05D005752 ORTHO05D006959 1.9e-23 113.2 157 51.6
Potri.004G066700 Populus trichocarpa HOM05D005752 ORTHO05D006959 3.2e-23 112.5 161 52.2
Duzib205G1872 Durio zibethinus HOM05D005752 ORTHO05D006959 4.2e-23 112.1 158 49.4
MBI03_g11902_MAGBIO Magnolia biondii HOM05D005752 ORTHO05D006959 5.4e-23 111.7 148 49.3
Eucgr.H00664 Eucalyptus grandis HOM05D005752 ORTHO05D006959 7.1e-23 111.3 157 49.0
Prupe.1G588300 Prunus persica HOM05D005752 ORTHO05D006959 1.6e-22 110.2 161 48.4
Dinv04371 Davidia involucrata HOM05D005752 ORTHO05D006959 2.1e-22 109.8 159 51.6
CANSAT80G0630 Cannabis sativa HOM05D005752 ORTHO05D006959 2.7e-22 109.4 157 46.5
FvH4_5g27080 Fragaria vesca HOM05D005752 ORTHO05D006959 6.0e-22 108.2 160 46.2
Gohir.D07G067500 Gossypium hirsutum HOM05D005752 ORTHO05D006959 6.0e-22 108.2 157 47.1
Gorai.001G071100 Gossypium raimondii HOM05D005752 ORTHO05D006959 6.0e-22 108.2 157 47.1
C06p34060 Brassica napus HOM05D005752 ORTHO05D006959 7.9e-22 107.8 164 47.6
Eucgr.G00948 Eucalyptus grandis HOM05D005752 ORTHO05D006959 7.9e-22 107.8 119 57.1
AT1G73350 Arabidopsis thaliana HOM05D005752 ORTHO05D006959 3.9e-21 105.5 159 45.9
Carub.0002s2009 Capsella rubella HOM05D005752 ORTHO05D006959 3.9e-21 105.5 166 45.2
CARHR066400 Cardamine hirsuta HOM05D005752 ORTHO05D006959 8.7e-21 104.4 157 49.0
Medtr6g068990 Medicago truncatula HOM05D005752 ORTHO05D006959 1.1e-20 104.0 216 38.0
FAN13G1309 Fragaria x ananassa HOM05D005752 ORTHO05D006959 1.5e-20 103.6 126 52.4
AL2G33120 Arabidopsis lyrata HOM05D005752 ORTHO05D006959 2.5e-20 102.8 166 45.8
BcaC08g45649 Brassica carinata HOM05D005752 ORTHO05D006959 2.5e-20 102.8 126 54.8
A07p29840 Brassica napus HOM05D005752 ORTHO05D006959 2.5e-20 102.8 127 53.5
Sp5g28280 Schrenkiella parvula HOM05D005752 ORTHO05D006959 3.3e-20 102.4 178 44.9
CSS0040154 Camellia sinensis var. sinensis HOM05D005752 ORTHO05D006959 1.3e-19 100.5 169 46.2
BraA07t30622Z Brassica rapa HOM05D005752 ORTHO05D006959 2.1e-19 99.8 126 54.0
arahy.Tifrunner.gnm1.ann1.LY2Y4A Arachis hypogaea HOM05D005752 ORTHO05D006959 1.1e-18 97.4 134 47.8
Thhalv10019162m.g Eutrema salsugineum HOM05D005752 ORTHO05D006959 1.1e-18 97.4 147 47.6
Lj2g0008613 Lotus japonicus HOM05D005752 ORTHO05D006959 1.1e-18 97.4 172 42.4
DCAR_023237 Daucus carota HOM05D005752 ORTHO05D006959 1.8e-18 96.7 127 48.0
Eucgr.J01173 Eucalyptus grandis HOM05D005752 ORTHO05D006959 2.4e-18 96.3 134 47.8
Psat1g118960 Pisum sativum HOM05D005752 ORTHO05D006959 6.9e-18 94.7 138 47.8
Migut.O00287 Erythranthe guttata HOM05D005752 ORTHO05D006959 1.2e-17 94.0 157 45.9
THA.LOC104812187 Tarenaya hassleriana HOM05D005752 ORTHO05D006959 1.5e-17 93.6 167 44.3
ATR0124G026 Amborella trichopoda HOM05D005752 ORTHO05D006959 2.6e-17 92.8 163 42.9
EL10Ac8g19469 Beta vulgaris HOM05D005752 ORTHO05D006959 3.4e-17 92.4 125 47.2
BcaB03g15052 Brassica carinata HOM05D005752 ORTHO05D006959 3.4e-17 92.4 121 52.1
BcaB03g15707 Brassica carinata HOM05D005752 ORTHO05D006959 3.4e-17 92.4 120 50.8
Aa31LG4G3620 Aethionema arabicum HOM05D005752 ORTHO05D006959 4.5e-17 92.0 126 50.8
Ah.14g085830 Amaranthus hybridus HOM05D005752 ORTHO05D006959 4.5e-17 92.0 137 48.9
Ca_25284_v3 Cicer arietinum L. HOM05D005752 ORTHO05D006959 7.6e-17 91.3 127 52.0
ECA232G1540 Erigeron canadensis HOM05D005752 ORTHO05D006959 7.6e-17 91.3 159 41.5
Os02g0637900 Oryza sativa ssp. japonica HOM05D005752 ORTHO05D006959 7.6e-17 91.3 168 43.5
PGSC0003DMG400026968 Solanum tuberosum HOM05D005752 ORTHO05D006959 7.6e-17 91.3 115 49.6
BraA07t31481Z Brassica rapa HOM05D005752 ORTHO05D006959 9.9e-17 90.9 134 47.0
A07p39320 Brassica napus HOM05D005752 ORTHO05D006959 2.2e-16 89.7 137 47.4
MELO3C001966.2 Cucumis melo HOM05D005752 ORTHO05D006959 2.2e-16 89.7 172 42.4
PSO063G6484 Papaver somniferum HOM05D005752 ORTHO05D006959 2.2e-16 89.7 136 44.1
SHI05872 Sapria himalayana HOM05D005752 ORTHO05D006959 2.9e-16 89.4 92 58.7
MSTRG.23218 Avicennia marina HOM05D005752 ORTHO05D006959 3.8e-16 89.0 134 47.8
Glyma.16G210400 Glycine max HOM05D005752 ORTHO05D006959 3.8e-16 89.0 172 41.3
PSO782G4127 Papaver somniferum HOM05D005752 ORTHO05D006959 3.8e-16 89.0 136 44.9
Actinidia06837 Actinidia chinensis HOM05D005752 ORTHO05D006959 4.9e-16 88.6 164 42.7
Sc10g0008680 Simmondsia chinensis HOM05D005752 ORTHO05D006959 8.4e-16 87.8 162 42.0
Oeu038392.3 Olea europaea HOM05D005752 ORTHO05D006959 7.1e-15 84.7 110 50.9
Lsat_1_v5_gn_6_23301 Lactuca sativa HOM05D005752 ORTHO05D006959 1.6e-14 83.6 141 42.6
QL10p031508 Quercus lobata HOM05D005752 ORTHO05D006959 2.1e-14 83.2 173 38.7
CDE04G3305 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 4.6e-14 82.0 143 39.9
VMungo0464G0712 Vigna mungo HOM05D005752 ORTHO05D006959 4.6e-14 82.0 139 46.0
Glyma.09G161000 Glycine max HOM05D005752 ORTHO05D006959 6.0e-14 81.6 173 38.7
Nitab4.5_0005315g0030 Nicotiana tabacum HOM05D005752 ORTHO05D006959 6.0e-14 81.6 141 41.8
arahy.Tifrunner.gnm1.ann1.CL4QH0 Arachis hypogaea HOM05D005752 ORTHO05D006959 1.0e-13 80.9 128 47.7
Nitab4.5_0008182g0060 Nicotiana tabacum HOM05D005752 ORTHO05D006959 1.0e-13 80.9 156 41.7
Phvul.004G136400 Phaseolus vulgaris HOM05D005752 ORTHO05D006959 1.3e-13 80.5 172 40.7
Nitab4.5_0009307g0030 Nicotiana tabacum HOM05D005752 ORTHO05D006959 1.8e-13 80.1 115 47.0
Zm00001eb185640 Zea mays HOM05D005752 ORTHO05D006959 5.1e-13 78.6 168 40.5
CDE08G1652 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 6.7e-13 78.2 135 43.0
Lalb_Chr14g0370141 Lupinus albus HOM05D005752 ORTHO05D006959 8.7e-13 77.8 141 41.8
HanXRQChr04g0126301 Helianthus annuus HOM05D005752 ORTHO05D006959 1.1e-12 77.4 48 83.3
CAN.G65.61 Capsicum annuum HOM05D005752 ORTHO05D006959 1.9e-12 76.6 118 43.2
Sopen06g028430 Solanum pennellii HOM05D005752 ORTHO05D006959 1.9e-12 76.6 115 47.0
BcaC08g46759 Brassica carinata HOM05D005752 ORTHO05D006959 2.5e-12 76.3 129 46.5
SEGI_37918 Sequoiadendron giganteum HOM05D005752 ORTHO05D006959 1.6e-11 73.6 145 38.6
Solyc06g150131.1 Solanum lycopersicum HOM05D005752 ORTHO05D006959 3.7e-11 72.4 115 46.1
Mapoly0033s0045 Marchantia polymorpha HOM05D005752 ORTHO05D006959 1.1e-10 70.9 140 37.9
AagrBONN_evm.TU.Sc2ySwM_368.1654 Anthoceros agrestis HOM05D005752 ORTHO05D006959 2.0e-09 66.6 120 39.2
Peaxi162Scf00171g00037 Petunia axillaris HOM05D005752 ORTHO05D006959 2.0e-09 66.6 149 34.2
SMO232G0035 Selaginella moellendorffii HOM05D005752 ORTHO05D006959 2.0e-09 66.6 141 37.6
CsaV3_1G005260 Cucumis sativus L. HOM05D005752 ORTHO05D006959 4.5e-09 65.5 93 47.3
unitig_0.g1238 Utricularia gibba HOM05D000376 ORTHO05D000237 7.6e-09 64.7 77 51.9
CAN.G861.19 Capsicum annuum HOM05D005752 ORTHO05D006959 4.9e-08 62.0 161 36.6
Cfa017810 Carpinus fangiana HOM05D005752 ORTHO05D006959 6.5e-08 61.6 97 46.4
Hund06741 Selenicereus undatus HOM05D005752 ORTHO05D006959 1.2e-06 57.4 161 32.3
SGA_v2.0_scaffold25G10718 Striga asiatica HOM05D005752 ORTHO05D006959 4.6e-06 55.5 115 37.4


User provided reference genes

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